RNA–Protein interactions for RNA: ENST00000451088.6

GTF3C3-207, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-207ENST00000451088 TWIST1Q15672 202 aa4.84□□□□□ -1.63
GTF3C3-207ENST00000451088 AAK1Q2M2I8 961 aa4.84□□□□□ -1.63
GTF3C3-207ENST00000451088 RABL6Q3YEC7 729 aaPredicted RBP4.84□□□□□ -1.63
GTF3C3-207ENST00000451088 ANO7Q6IWH7 933 aa4.84□□□□□ -1.63
GTF3C3-207ENST00000451088 SHC4Q6S5L8 630 aa4.84□□□□□ -1.63
GTF3C3-207ENST00000451088 PIP4P1Q86T03 277 aa4.84□□□□□ -1.63
GTF3C3-207ENST00000451088 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.84□□□□□ -1.63
GTF3C3-207ENST00000451088 TDRD7Q8NHU6 1098 aaKnown RBP4.84□□□□□ -1.63
GTF3C3-207ENST00000451088 TEKT1Q969V4 418 aa4.84□□□□□ -1.63
GTF3C3-207ENST00000451088 PARK7Q99497 189 aaKnown RBP4.84□□□□□ -1.63
GTF3C3-207ENST00000451088 BICC1Q9H694 974 aaKnown RBP4.84□□□□□ -1.63
GTF3C3-207ENST00000451088 TDRD3Q9H7E2 651 aaKnown RBP4.84□□□□□ -1.63
GTF3C3-207ENST00000451088 PI4KBQ9UBF8 816 aa4.84□□□□□ -1.63
GTF3C3-207ENST00000451088 PCDHGB6Q9Y5F9 930 aa4.84□□□□□ -1.63
GTF3C3-207ENST00000451088 ACACBO00763 2458 aa4.83□□□□□ -1.64
GTF3C3-207ENST00000451088 CACNA1IQ9P0X4 2223 aa4.83□□□□□ -1.64
GTF3C3-207ENST00000451088 DNAH12Q6ZR08 3092 aa4.83□□□□□ -1.64
GTF3C3-207ENST00000451088 A0A087WZ62 844 aa4.83□□□□□ -1.64
GTF3C3-207ENST00000451088 CXCL11O14625 94 aa4.83□□□□□ -1.64
GTF3C3-207ENST00000451088 ADAM10O14672 748 aa4.83□□□□□ -1.64
GTF3C3-207ENST00000451088 PRAMEF2O60811 474 aa4.83□□□□□ -1.64
GTF3C3-207ENST00000451088 NTN1O95631 604 aa4.83□□□□□ -1.64
GTF3C3-207ENST00000451088 NBPF7P0C2Y1 421 aaPredicted RBP4.83□□□□□ -1.64
GTF3C3-207ENST00000451088 UBTFL1P0CB47 393 aaPredicted RBP4.83□□□□□ -1.64
GTF3C3-207ENST00000451088 PRF1P14222 555 aa4.83□□□□□ -1.64
GTF3C3-207ENST00000451088 TXNL4AP83876 142 aaKnown RBP4.83□□□□□ -1.64
GTF3C3-207ENST00000451088 CHAF1AQ13111 956 aaPredicted RBP4.83□□□□□ -1.64
GTF3C3-207ENST00000451088 DAG1Q14118 895 aa4.83□□□□□ -1.64
GTF3C3-207ENST00000451088 ACOX1Q15067 660 aa4.83□□□□□ -1.64
GTF3C3-207ENST00000451088 RBMS2Q15434 407 aaKnown RBP4.83□□□□□ -1.64
GTF3C3-207ENST00000451088 MAP3K21Q5TCX8 1036 aa4.83□□□□□ -1.64
GTF3C3-207ENST00000451088 GRHL2Q6ISB3 625 aa4.83□□□□□ -1.64
GTF3C3-207ENST00000451088 RNF44Q7L0R7 432 aa4.83□□□□□ -1.64
GTF3C3-207ENST00000451088 NRACQ8N912 160 aa4.83□□□□□ -1.64
GTF3C3-207ENST00000451088 SUN3Q8TAQ9 357 aa4.83□□□□□ -1.64
GTF3C3-207ENST00000451088 TIFAQ96CG3 184 aa4.83□□□□□ -1.64
GTF3C3-207ENST00000451088 FAM84BQ96KN1 310 aaPredicted RBP4.83□□□□□ -1.64
GTF3C3-207ENST00000451088 API5Q9BZZ5 524 aaKnown RBP4.83□□□□□ -1.64
GTF3C3-207ENST00000451088 AS3MTQ9HBK9 375 aa4.83□□□□□ -1.64
GTF3C3-207ENST00000451088 VPS45Q9NRW7 570 aa4.83□□□□□ -1.64
GTF3C3-207ENST00000451088 SMC4Q9NTJ3 1288 aa4.83□□□□□ -1.64
GTF3C3-207ENST00000451088 LTBP2Q14767 1821 aa4.83□□□□□ -1.64
GTF3C3-207ENST00000451088 RLFQ13129 1914 aa4.82□□□□□ -1.64
GTF3C3-207ENST00000451088 ZMYM2Q9UBW7 1377 aa4.82□□□□□ -1.64
GTF3C3-207ENST00000451088 SPTBN2O15020 2390 aa4.82□□□□□ -1.64
GTF3C3-207ENST00000451088 CLCA1A8K7I4 914 aa4.82□□□□□ -1.64
GTF3C3-207ENST00000451088 SNAP23O00161 211 aa4.82□□□□□ -1.64
GTF3C3-207ENST00000451088 EYA2O00167 538 aa4.82□□□□□ -1.64
GTF3C3-207ENST00000451088 IPO8O15397 1037 aaKnown RBP4.82□□□□□ -1.64
GTF3C3-207ENST00000451088 CIAO1O76071 339 aa4.82□□□□□ -1.64
GTF3C3-207ENST00000451088 WDR47O94967 919 aa4.82□□□□□ -1.64
GTF3C3-207ENST00000451088 IL18RAPO95256 599 aa4.82□□□□□ -1.64
GTF3C3-207ENST00000451088 TMEM191BP0C7N4 346 aa4.82□□□□□ -1.64
GTF3C3-207ENST00000451088 TMEM225BP0DP42 221 aa4.82□□□□□ -1.64
GTF3C3-207ENST00000451088 CTSAP10619 480 aa4.82□□□□□ -1.64
GTF3C3-207ENST00000451088 DEKP35659 375 aaKnown RBP4.82□□□□□ -1.64
GTF3C3-207ENST00000451088 IL15P40933 162 aaPredicted RBP4.82□□□□□ -1.64
GTF3C3-207ENST00000451088 GYG1P46976 350 aa4.82□□□□□ -1.64
GTF3C3-207ENST00000451088 FOXG1P55316 489 aaPredicted RBP4.82□□□□□ -1.64
GTF3C3-207ENST00000451088 HSF1Q00613 529 aa4.82□□□□□ -1.64
GTF3C3-207ENST00000451088 FASTKD5Q7L8L6 764 aaKnown RBP4.82□□□□□ -1.64
GTF3C3-207ENST00000451088 IRF2BP2Q7Z5L9 587 aa4.82□□□□□ -1.64
GTF3C3-207ENST00000451088 ANKRD13CQ8N6S4 541 aa4.82□□□□□ -1.64
GTF3C3-207ENST00000451088 FAM71DQ8N9W8 422 aa4.82□□□□□ -1.64
GTF3C3-207ENST00000451088 VCPIP1Q96JH7 1222 aa4.82□□□□□ -1.64
GTF3C3-207ENST00000451088 CINPQ9BW66 212 aaPredicted RBP4.82□□□□□ -1.64
GTF3C3-207ENST00000451088 SLC25A32Q9H2D1 315 aa4.82□□□□□ -1.64
GTF3C3-207ENST00000451088 USP29Q9HBJ7 922 aa4.82□□□□□ -1.64
GTF3C3-207ENST00000451088 TBC1D23Q9NUY8 699 aa4.82□□□□□ -1.64
GTF3C3-207ENST00000451088 CFAP54Q96N23 3096 aa4.81□□□□□ -1.64
GTF3C3-207ENST00000451088 PLXNB2O15031 1838 aa4.81□□□□□ -1.64
GTF3C3-207ENST00000451088 RPAP1Q9BWH6 1393 aaPredicted RBP4.81□□□□□ -1.64
GTF3C3-207ENST00000451088 EP300Q09472 2414 aaPredicted RBP4.81□□□□□ -1.64
GTF3C3-207ENST00000451088 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.81□□□□□ -1.64
GTF3C3-207ENST00000451088 CCER2I3L3R5 266 aa4.81□□□□□ -1.64
GTF3C3-207ENST00000451088 THAP12O43422 761 aa4.81□□□□□ -1.64
GTF3C3-207ENST00000451088 CBFA2T3O75081 653 aa4.81□□□□□ -1.64
GTF3C3-207ENST00000451088 CYP2B6P20813 491 aa4.81□□□□□ -1.64
GTF3C3-207ENST00000451088 ITGB8P26012 769 aa4.81□□□□□ -1.64
GTF3C3-207ENST00000451088 CCND3P30281 292 aaPredicted RBP4.81□□□□□ -1.64
GTF3C3-207ENST00000451088 RPS13P62277 151 aaKnown RBP4.81□□□□□ -1.64
GTF3C3-207ENST00000451088 ID2Q02363 134 aa4.81□□□□□ -1.64
GTF3C3-207ENST00000451088 ZNF91Q05481 1191 aa4.81□□□□□ -1.64
GTF3C3-207ENST00000451088 CCDC15Q0P6D6 951 aa4.81□□□□□ -1.64
GTF3C3-207ENST00000451088 TRIM71Q2Q1W2 868 aaKnown RBP4.81□□□□□ -1.64
GTF3C3-207ENST00000451088 LRRC24Q50LG9 513 aa4.81□□□□□ -1.64
GTF3C3-207ENST00000451088 SLC39A5Q6ZMH5 540 aa4.81□□□□□ -1.64
GTF3C3-207ENST00000451088 DGKHQ86XP1 1220 aa4.81□□□□□ -1.64
GTF3C3-207ENST00000451088 ANKRD44Q8N8A2 993 aa4.81□□□□□ -1.64
GTF3C3-207ENST00000451088 TRIB2Q92519 343 aa4.81□□□□□ -1.64
GTF3C3-207ENST00000451088 ARHGAP45Q92619 1136 aa4.81□□□□□ -1.64
GTF3C3-207ENST00000451088 TTC17Q96AE7 1141 aa4.81□□□□□ -1.64
GTF3C3-207ENST00000451088 P2RY11Q96G91 374 aa4.81□□□□□ -1.64
GTF3C3-207ENST00000451088 WDR24Q96S15 920 aa4.81□□□□□ -1.64
GTF3C3-207ENST00000451088 APOL5Q9BWW9 433 aa4.81□□□□□ -1.64
GTF3C3-207ENST00000451088 PUS3Q9BZE2 481 aaKnown RBP4.81□□□□□ -1.64
GTF3C3-207ENST00000451088 USP44Q9H0E7 712 aa4.81□□□□□ -1.64
GTF3C3-207ENST00000451088 ZBTB26Q9HCK0 441 aa4.81□□□□□ -1.64
GTF3C3-207ENST00000451088 PNPLA8Q9NP80 782 aa4.81□□□□□ -1.64
GTF3C3-207ENST00000451088 HEYLQ9NQ87 328 aaPredicted RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms