RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 NAGPAQ9UK23 515 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 RBMX2Q9Y388 322 aaKnown RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 POLR3HQ9Y535 204 aaPredicted RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 PI4K2BG5E9Z4 385 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 K7ENM7 598 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 POLR1CO15160 346 aaPredicted RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 KCNN4O15554 427 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 AQP9O43315 295 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 NDUFS2O75306 463 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 PMPCBO75439 489 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 STX11O75558 287 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 SERPINB7O75635 380 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 FTLP02792 175 aaPredicted RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 RPLP0P05388 317 aaKnown RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 MYBP10242 640 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 THRBP10828 461 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 UCHL3P15374 230 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 RXRAP19793 462 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 DNAJB1P25685 340 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 GUCY1A2P33402 732 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 TECP42680 631 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 PPP3CCP48454 512 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 CENPAP49450 140 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 HADHBP55084 474 aaKnown RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 IL5RAQ01344 420 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 CHRNDQ07001 517 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 AP3B2Q13367 1082 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 TDGQ13569 410 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 DRAP1Q14919 205 aaPredicted RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 TGFBIQ15582 683 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 WDR72Q3MJ13 1102 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 ESCO2Q56NI9 601 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 EARS2Q5JPH6 523 aaKnown RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 COLEC12Q5KU26 742 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 IRAK1BP1Q5VVH5 260 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 HACD4Q5VWC8 232 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 ZNF57Q68EA5 555 aaPredicted RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 BAIAP2L2Q6UXY1 529 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 NAPRTQ6XQN6 538 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 NT5DC3Q86UY8 548 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 GPR180Q86V85 440 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 COMMD7Q86VX2 200 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 IFNL3Q8IZI9 196 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 GANCQ8TET4 914 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 JDP2Q8WYK2 163 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 KAT2AQ92830 837 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 KHSRPQ92945 711 aaKnown RBP eCLIP2.24□□□□□ -2.053e-6■■■□□ 15.5
USP53-202ENST00000450251 SLCO2A1Q92959 643 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 CENPNQ96H22 339 aaPredicted RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 HES6Q96HZ4 224 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 FAM84AQ96KN4 292 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 SSX3Q99909 188 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 DBNDD2Q9BQY9 259 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 ABCG8Q9H221 673 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 TTYH1Q9H313 450 aaPredicted RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 OLA1Q9NTK5 396 aaKnown RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 IMPAD1Q9NX62 359 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 UBP1Q9NZI7 540 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 NKX1-2Q9UD57 310 aaPredicted RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 GGA1Q9UJY5 639 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 ZNF222Q9UK12 451 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 DRG1Q9Y295 367 aaKnown RBP2.24□□□□□ -2.05
USP53-202ENST00000450251 PCDHA3Q9Y5H8 950 aa2.24□□□□□ -2.05
USP53-202ENST00000450251 COL3A1P02461 1466 aaPredicted RBP2.23□□□□□ -2.05
USP53-202ENST00000450251 H3BNH8 94 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 CST8O60676 142 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 RNASEH1O60930 286 aaKnown RBP2.23□□□□□ -2.05
USP53-202ENST00000450251 REM1O75628 298 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 KRT33AO76009 404 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 RECQL5O94762 991 aaPredicted RBP2.23□□□□□ -2.05
USP53-202ENST00000450251 RASGRP1O95267 797 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 SERPINA1P01009 418 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 PGRP06401 933 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 ITGAVP06756 1048 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 ASNSP08243 561 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 HSMCR30P0CW71 290 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 HOXB8P17481 243 aaPredicted RBP2.23□□□□□ -2.05
USP53-202ENST00000450251 AOC1P19801 751 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 NR4A1P22736 598 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 AMPD1P23109 780 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 MAOBP27338 520 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 PEX2P28328 305 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 HTR2BP41595 481 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 RAB2AP61019 212 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 PITPNAQ00169 270 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 ELP6Q0PNE2 266 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 NME3Q13232 169 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 BIKQ13323 160 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 RFTN1Q14699 578 aaPredicted RBP2.23□□□□□ -2.05
USP53-202ENST00000450251 STARD3Q14849 445 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 DLG2Q15700 870 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 PYDC2Q56P42 97 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 PLEKHG4Q58EX7 1191 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 BRMS1LQ5PSV4 323 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 ANKS6Q68DC2 871 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 IQSEC1Q6DN90 963 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 CIAPIN1Q6FI81 312 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 HAGHLQ6PII5 290 aaPredicted RBP2.23□□□□□ -2.05
USP53-202ENST00000450251 LDHAL6AQ6ZMR3 332 aa2.23□□□□□ -2.05
USP53-202ENST00000450251 ADAMTSL2Q86TH1 951 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms