RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 TNIP3Q96KP6 325 aa8.16□□□□□ -1.1
LINC01961-201ENST00000449954 GFM1Q96RP9 751 aaKnown RBP8.16□□□□□ -1.1
LINC01961-201ENST00000449954 IL12RB2Q99665 862 aa8.16□□□□□ -1.1
LINC01961-201ENST00000449954 CMKLR1Q99788 373 aa8.16□□□□□ -1.1
LINC01961-201ENST00000449954 REEP2Q9BRK0 252 aa8.16□□□□□ -1.1
LINC01961-201ENST00000449954 BOCQ9BWV1 1114 aa8.16□□□□□ -1.1
LINC01961-201ENST00000449954 ST6GALNAC4Q9H4F1 302 aa8.16□□□□□ -1.1
LINC01961-201ENST00000449954 CSNK1G1Q9HCP0 422 aa8.16□□□□□ -1.1
LINC01961-201ENST00000449954 PREBQ9HCU5 417 aa8.16□□□□□ -1.1
LINC01961-201ENST00000449954 FOXJ2Q9P0K8 574 aa8.16□□□□□ -1.1
LINC01961-201ENST00000449954 NYNRINQ9P2P1 1898 aaKnown RBP8.16□□□□□ -1.1
LINC01961-201ENST00000449954 TP53TG5Q9Y2B4 290 aa8.16□□□□□ -1.1
LINC01961-201ENST00000449954 NME7Q9Y5B8 376 aa8.16□□□□□ -1.1
LINC01961-201ENST00000449954 PCDHA5Q9Y5H7 936 aa8.16□□□□□ -1.1
LINC01961-201ENST00000449954 CYP46A1Q9Y6A2 500 aa8.16□□□□□ -1.1
LINC01961-201ENST00000449954 SVILO95425 2214 aa8.15□□□□□ -1.1
LINC01961-201ENST00000449954 TDRD6O60522 2096 aaKnown RBP8.15□□□□□ -1.1
LINC01961-201ENST00000449954 NPHP3-ACAD11A0A0J9YXS1 232 aa8.15□□□□□ -1.1
LINC01961-201ENST00000449954 EDDM13A0A1B0GTR0 161 aa8.15□□□□□ -1.1
LINC01961-201ENST00000449954 PP2D1A8MPX8 630 aa8.15□□□□□ -1.1
LINC01961-201ENST00000449954 AQP9O43315 295 aa8.15□□□□□ -1.1
LINC01961-201ENST00000449954 CSF2P04141 144 aa8.15□□□□□ -1.1
LINC01961-201ENST00000449954 PLA2G4BP0C869 781 aa8.15□□□□□ -1.1
LINC01961-201ENST00000449954 ARAFP10398 606 aa8.15□□□□□ -1.1
LINC01961-201ENST00000449954 RALAP11233 206 aa8.15□□□□□ -1.1
LINC01961-201ENST00000449954 ITIH1P19827 911 aa8.15□□□□□ -1.1
LINC01961-201ENST00000449954 MZF1P28698 734 aaPredicted RBP8.15□□□□□ -1.1
LINC01961-201ENST00000449954 AKT2P31751 481 aa8.15□□□□□ -1.1
LINC01961-201ENST00000449954 DRD3P35462 400 aa8.15□□□□□ -1.1
LINC01961-201ENST00000449954 PSMA6P60900 246 aaKnown RBP8.15□□□□□ -1.1
LINC01961-201ENST00000449954 SNRPNP63162 240 aaKnown RBP8.15□□□□□ -1.1
LINC01961-201ENST00000449954 TNNC1P63316 161 aa8.15□□□□□ -1.1
LINC01961-201ENST00000449954 DRAP1Q14919 205 aaPredicted RBP8.15□□□□□ -1.1
LINC01961-201ENST00000449954 ZXDCQ2QGD7 858 aaPredicted RBP8.15□□□□□ -1.1
LINC01961-201ENST00000449954 POM121L1PQ3SYA9 428 aa8.15□□□□□ -1.1
LINC01961-201ENST00000449954 TTC38Q5R3I4 469 aa8.15□□□□□ -1.1
LINC01961-201ENST00000449954 C9orf64Q5T6V5 341 aa8.15□□□□□ -1.1
LINC01961-201ENST00000449954 SCARA3Q6AZY7 606 aa8.15□□□□□ -1.1
LINC01961-201ENST00000449954 TCTN3Q6NUS6 607 aa8.15□□□□□ -1.1
LINC01961-201ENST00000449954 PARGQ86W56 976 aa8.15□□□□□ -1.1
LINC01961-201ENST00000449954 ZC3H3Q8IXZ2 948 aaKnown RBP8.15□□□□□ -1.1
LINC01961-201ENST00000449954 SLC22A18ASQ8N1D0 253 aa8.15□□□□□ -1.1
LINC01961-201ENST00000449954 IL22RA1Q8N6P7 574 aa8.15□□□□□ -1.1
LINC01961-201ENST00000449954 FIZ1Q96SL8 496 aa8.15□□□□□ -1.1
LINC01961-201ENST00000449954 MMTAG2Q9BU76 263 aaKnown RBP8.15□□□□□ -1.1
LINC01961-201ENST00000449954 FOXP3Q9BZS1 431 aa8.15□□□□□ -1.1
LINC01961-201ENST00000449954 CDH19Q9H159 772 aa8.15□□□□□ -1.1
LINC01961-201ENST00000449954 MTG2Q9H4K7 406 aa8.15□□□□□ -1.1
LINC01961-201ENST00000449954 INTS13Q9NVM9 706 aa8.15□□□□□ -1.1
LINC01961-201ENST00000449954 CLIC5Q9NZA1 410 aa8.15□□□□□ -1.1
LINC01961-201ENST00000449954 RASAL2Q9UJF2 1139 aa8.15□□□□□ -1.1
LINC01961-201ENST00000449954 STRIP2Q9ULQ0 834 aa8.15□□□□□ -1.1
LINC01961-201ENST00000449954 ENTPD4Q9Y227 616 aa8.15□□□□□ -1.1
LINC01961-201ENST00000449954 CA5BQ9Y2D0 317 aa8.15□□□□□ -1.1
LINC01961-201ENST00000449954 ITIH6Q6UXX5 1313 aa8.14□□□□□ -1.11
LINC01961-201ENST00000449954 A0A1W2PQH9 124 aa8.14□□□□□ -1.11
LINC01961-201ENST00000449954 A6NNZ2 444 aa8.14□□□□□ -1.11
LINC01961-201ENST00000449954 C9orf172C9J069 976 aa8.14□□□□□ -1.11
LINC01961-201ENST00000449954 MKRN2OSH3BPM6 223 aa8.14□□□□□ -1.11
LINC01961-201ENST00000449954 TBCAO75347 108 aaKnown RBP8.14□□□□□ -1.11
LINC01961-201ENST00000449954 PRPF6O94906 941 aaKnown RBP8.14□□□□□ -1.11
LINC01961-201ENST00000449954 IL1BP01584 269 aa8.14□□□□□ -1.11
LINC01961-201ENST00000449954 FAM157BP0CG42 384 aa8.14□□□□□ -1.11
LINC01961-201ENST00000449954 PRF1P14222 555 aa8.14□□□□□ -1.11
LINC01961-201ENST00000449954 LIFP15018 202 aa8.14□□□□□ -1.11
LINC01961-201ENST00000449954 HNRNPA2B1P22626 353 aaKnown RBP8.14□□□□□ -1.11
LINC01961-201ENST00000449954 CDC20Q12834 499 aa8.14□□□□□ -1.11
LINC01961-201ENST00000449954 DUOXA2Q1HG44 320 aa8.14□□□□□ -1.11
LINC01961-201ENST00000449954 DEFB133Q30KQ1 61 aa8.14□□□□□ -1.11
LINC01961-201ENST00000449954 ARSHQ5FYA8 562 aa8.14□□□□□ -1.11
LINC01961-201ENST00000449954 MPP7Q5T2T1 576 aa8.14□□□□□ -1.11
LINC01961-201ENST00000449954 NUGGCQ68CJ6 796 aa8.14□□□□□ -1.11
LINC01961-201ENST00000449954 ESRP1Q6NXG1 681 aaKnown RBP8.14□□□□□ -1.11
LINC01961-201ENST00000449954 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.14□□□□□ -1.11
LINC01961-201ENST00000449954 PAQR9Q6ZVX9 377 aa8.14□□□□□ -1.11
LINC01961-201ENST00000449954 ABI3BPQ7Z7G0 1075 aa8.14□□□□□ -1.11
LINC01961-201ENST00000449954 SLC35F3Q8IY50 421 aa8.14□□□□□ -1.11
LINC01961-201ENST00000449954 ZMIZ2Q8NF64 920 aa8.14□□□□□ -1.11
LINC01961-201ENST00000449954 PTPRN2Q92932 1015 aa8.14□□□□□ -1.11
LINC01961-201ENST00000449954 USP7Q93009 1102 aa8.14□□□□□ -1.11
LINC01961-201ENST00000449954 NKD1Q969G9 470 aa8.14□□□□□ -1.11
LINC01961-201ENST00000449954 TTC17Q96AE7 1141 aa8.14□□□□□ -1.11
LINC01961-201ENST00000449954 PLD4Q96BZ4 506 aa8.14□□□□□ -1.11
LINC01961-201ENST00000449954 SAAL1Q96ER3 474 aa8.14□□□□□ -1.11
LINC01961-201ENST00000449954 CDK5RAP3Q96JB5 506 aa8.14□□□□□ -1.11
LINC01961-201ENST00000449954 SLC45A3Q96JT2 553 aa8.14□□□□□ -1.11
LINC01961-201ENST00000449954 HAPLN3Q96S86 360 aa8.14□□□□□ -1.11
LINC01961-201ENST00000449954 SLC29A3Q9BZD2 475 aa8.14□□□□□ -1.11
LINC01961-201ENST00000449954 NMUR1Q9HB89 426 aa8.14□□□□□ -1.11
LINC01961-201ENST00000449954 PDE11AQ9HCR9 933 aa8.14□□□□□ -1.11
LINC01961-201ENST00000449954 PNPLA8Q9NP80 782 aa8.14□□□□□ -1.11
LINC01961-201ENST00000449954 GPR27Q9NS67 375 aa8.14□□□□□ -1.11
LINC01961-201ENST00000449954 NAGPAQ9UK23 515 aa8.14□□□□□ -1.11
LINC01961-201ENST00000449954 NUDT5Q9UKK9 219 aa8.14□□□□□ -1.11
LINC01961-201ENST00000449954 PCSK5Q92824 1860 aa8.14□□□□□ -1.11
LINC01961-201ENST00000449954 ZNF106Q9H2Y7 1883 aaKnown RBP8.13□□□□□ -1.11
LINC01961-201ENST00000449954 HEATR9A2RTY3 570 aa8.13□□□□□ -1.11
LINC01961-201ENST00000449954 VWA3AA6NCI4 1184 aa8.13□□□□□ -1.11
LINC01961-201ENST00000449954 PFKFB2O60825 505 aa8.13□□□□□ -1.11
LINC01961-201ENST00000449954 CTDNEP1O95476 244 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms