RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 CHRNA3P32297 505 aa15.63■□□□□ 0.09
CHD3-205ENST00000449744 RFC1P35251 1148 aaPredicted RBP15.63■□□□□ 0.09
CHD3-205ENST00000449744 CCT8P50990 548 aa15.63■□□□□ 0.09
CHD3-205ENST00000449744 FAM193AP78312 1265 aa15.63■□□□□ 0.09
CHD3-205ENST00000449744 GNA12Q03113 381 aa15.63■□□□□ 0.09
CHD3-205ENST00000449744 C1QBPQ07021 282 aaKnown RBP15.63■□□□□ 0.09
CHD3-205ENST00000449744 CCDC15Q0P6D6 951 aa15.63■□□□□ 0.09
CHD3-205ENST00000449744 ZNF423Q2M1K9 1284 aa15.63■□□□□ 0.09
CHD3-205ENST00000449744 RAB6CQ53S08 254 aa15.63■□□□□ 0.09
CHD3-205ENST00000449744 DNAJC24Q6P3W2 148 aa15.63■□□□□ 0.09
CHD3-205ENST00000449744 LINGO4Q6UY18 593 aa15.63■□□□□ 0.09
CHD3-205ENST00000449744 PRPF39Q86UA1 669 aaKnown RBP15.63■□□□□ 0.09
CHD3-205ENST00000449744 C3orf20Q8ND61 904 aa15.63■□□□□ 0.09
CHD3-205ENST00000449744 SCNM1Q9BWG6 230 aa15.63■□□□□ 0.09
CHD3-205ENST00000449744 RAB6CQ9H0N0 254 aa15.63■□□□□ 0.09
CHD3-205ENST00000449744 OSBPL2Q9H1P3 480 aa15.63■□□□□ 0.09
CHD3-205ENST00000449744 DYRK4Q9NR20 520 aa15.63■□□□□ 0.09
CHD3-205ENST00000449744 SARDHQ9UL12 918 aa15.63■□□□□ 0.09
CHD3-205ENST00000449744 PCNX2A6NKB5 2137 aa15.62■□□□□ 0.09
CHD3-205ENST00000449744 SIGLEC16A6NMB1 481 aa15.62■□□□□ 0.09
CHD3-205ENST00000449744 KPNA3O00505 521 aaPredicted RBP15.62■□□□□ 0.09
CHD3-205ENST00000449744 KCNK3O14649 394 aa15.62■□□□□ 0.09
CHD3-205ENST00000449744 TEX33O43247 280 aa15.62■□□□□ 0.09
CHD3-205ENST00000449744 PLRG1O43660 514 aaKnown RBP15.62■□□□□ 0.09
CHD3-205ENST00000449744 DFNA5O60443 496 aa15.62■□□□□ 0.09
CHD3-205ENST00000449744 RTN2O75298 545 aa15.62■□□□□ 0.09
CHD3-205ENST00000449744 RHOQP17081 205 aa15.62■□□□□ 0.09
CHD3-205ENST00000449744 GLDCP23378 1020 aa15.62■□□□□ 0.09
CHD3-205ENST00000449744 CD38P28907 300 aa15.62■□□□□ 0.09
CHD3-205ENST00000449744 ETFBP38117 255 aa15.62■□□□□ 0.09
CHD3-205ENST00000449744 CTSKP43235 329 aa15.62■□□□□ 0.09
CHD3-205ENST00000449744 ZNF165P49910 485 aa15.62■□□□□ 0.09
CHD3-205ENST00000449744 METAP1P53582 386 aa15.62■□□□□ 0.09
CHD3-205ENST00000449744 HDAC4P56524 1084 aa15.62■□□□□ 0.09
CHD3-205ENST00000449744 NRG1Q02297 640 aaPredicted RBP15.62■□□□□ 0.09
CHD3-205ENST00000449744 SLC20A2Q08357 652 aa15.62■□□□□ 0.09
CHD3-205ENST00000449744 CNTN1Q12860 1018 aa15.62■□□□□ 0.09
CHD3-205ENST00000449744 ACAD10Q6JQN1 1059 aa15.62■□□□□ 0.09
CHD3-205ENST00000449744 C22orf39Q6P5X5 142 aa15.62■□□□□ 0.09
CHD3-205ENST00000449744 WDR59Q6PJI9 974 aa15.62■□□□□ 0.09
CHD3-205ENST00000449744 MON1BQ7L1V2 547 aa15.62■□□□□ 0.09
CHD3-205ENST00000449744 RHBDD1Q8TEB9 315 aa15.62■□□□□ 0.09
CHD3-205ENST00000449744 CENPIQ92674 756 aaPredicted RBP15.62■□□□□ 0.09
CHD3-205ENST00000449744 TBC1D31Q96DN5 1066 aa15.62■□□□□ 0.09
CHD3-205ENST00000449744 SERAC1Q96JX3 654 aa15.62■□□□□ 0.09
CHD3-205ENST00000449744 RETREG1Q9H6L5 497 aa15.62■□□□□ 0.09
CHD3-205ENST00000449744 EBF2Q9HAK2 575 aa15.62■□□□□ 0.09
CHD3-205ENST00000449744 RTN4Q9NQC3 1192 aaKnown RBP15.62■□□□□ 0.09
CHD3-205ENST00000449744 PCOLCE2Q9UKZ9 415 aa15.62■□□□□ 0.09
CHD3-205ENST00000449744 MYO6Q9UM54 1294 aa15.62■□□□□ 0.09
CHD3-205ENST00000449744 H0Y8X5 98 aa15.61■□□□□ 0.09
CHD3-205ENST00000449744 SMAD6O43541 496 aaKnown RBP15.61■□□□□ 0.09
CHD3-205ENST00000449744 HYAL3O43820 417 aaPredicted RBP15.61■□□□□ 0.09
CHD3-205ENST00000449744 PRNPP04156 253 aa15.61■□□□□ 0.09
CHD3-205ENST00000449744 PLEKP08567 350 aaPredicted RBP15.61■□□□□ 0.09
CHD3-205ENST00000449744 MAPKAPK2P49137 400 aa15.61■□□□□ 0.09
CHD3-205ENST00000449744 PPP2CBP62714 309 aa15.61■□□□□ 0.09
CHD3-205ENST00000449744 PPP2CAP67775 309 aa15.61■□□□□ 0.09
CHD3-205ENST00000449744 AGBL4Q5VU57 503 aa15.61■□□□□ 0.09
CHD3-205ENST00000449744 PPP1R2P3Q6NXS1 205 aa15.61■□□□□ 0.09
CHD3-205ENST00000449744 SCYL2Q6P3W7 929 aa15.61■□□□□ 0.09
CHD3-205ENST00000449744 DCUN1D2Q6PH85 259 aa15.61■□□□□ 0.09
CHD3-205ENST00000449744 SLFN11Q7Z7L1 901 aa15.61■□□□□ 0.09
CHD3-205ENST00000449744 CCDC185Q8N715 623 aa15.61■□□□□ 0.09
CHD3-205ENST00000449744 TMIEQ8NEW7 156 aa15.61■□□□□ 0.09
CHD3-205ENST00000449744 OR2A12Q8NGT7 310 aa15.61■□□□□ 0.09
CHD3-205ENST00000449744 NTAN1Q96AB6 310 aa15.61■□□□□ 0.09
CHD3-205ENST00000449744 FAM131CQ96AQ9 280 aa15.61■□□□□ 0.09
CHD3-205ENST00000449744 MCEEQ96PE7 176 aa15.61■□□□□ 0.09
CHD3-205ENST00000449744 CEP44Q9C0F1 390 aa15.61■□□□□ 0.09
CHD3-205ENST00000449744 TNKS2Q9H2K2 1166 aa15.61■□□□□ 0.09
CHD3-205ENST00000449744 ZNF212Q9UDV6 495 aa15.61■□□□□ 0.09
CHD3-205ENST00000449744 DNAI1Q9UI46 699 aa15.61■□□□□ 0.09
CHD3-205ENST00000449744 WASF3Q9UPY6 502 aa15.61■□□□□ 0.09
CHD3-205ENST00000449744 APOBEC2Q9Y235 224 aaKnown RBP15.61■□□□□ 0.09
CHD3-205ENST00000449744 CCP110O43303 1012 aa15.6■□□□□ 0.09
CHD3-205ENST00000449744 LATO43561 262 aa15.6■□□□□ 0.09
CHD3-205ENST00000449744 CBFA2T3O75081 653 aa15.6■□□□□ 0.09
CHD3-205ENST00000449744 LRIG2O94898 1065 aa15.6■□□□□ 0.09
CHD3-205ENST00000449744 CTSLP07711 333 aa15.6■□□□□ 0.09
CHD3-205ENST00000449744 MAT2AP31153 395 aaKnown RBP15.6■□□□□ 0.09
CHD3-205ENST00000449744 NUDT1P36639 197 aa15.6■□□□□ 0.09
CHD3-205ENST00000449744 SERPINH1P50454 418 aaKnown RBP15.6■□□□□ 0.09
CHD3-205ENST00000449744 DNA2P51530 1060 aa15.6■□□□□ 0.09
CHD3-205ENST00000449744 ZNF143P52747 638 aaPredicted RBP15.6■□□□□ 0.09
CHD3-205ENST00000449744 ASIC2Q16515 512 aa15.6■□□□□ 0.09
CHD3-205ENST00000449744 INAVAQ3KP66 663 aa15.6■□□□□ 0.09
CHD3-205ENST00000449744 EFHC2Q5JST6 749 aa15.6■□□□□ 0.09
CHD3-205ENST00000449744 KCNT1Q5JUK3 1230 aa15.6■□□□□ 0.09
CHD3-205ENST00000449744 ARTNQ5T4W7 220 aa15.6■□□□□ 0.09
CHD3-205ENST00000449744 MANEALQ5VSG8 457 aa15.6■□□□□ 0.09
CHD3-205ENST00000449744 NAPEPLDQ6IQ20 393 aa15.6■□□□□ 0.09
CHD3-205ENST00000449744 UNQ6494/PRO21346Q6UXR6 183 aa15.6■□□□□ 0.09
CHD3-205ENST00000449744 DBX2Q6ZNG2 339 aa15.6■□□□□ 0.09
CHD3-205ENST00000449744 CHCHD4Q8N4Q1 142 aa15.6■□□□□ 0.09
CHD3-205ENST00000449744 PCDH20Q8N6Y1 951 aaKnown RBP15.6■□□□□ 0.09
CHD3-205ENST00000449744 CHST14Q8NCH0 376 aa15.6■□□□□ 0.09
CHD3-205ENST00000449744 PPP1R16AQ96I34 528 aa15.6■□□□□ 0.09
CHD3-205ENST00000449744 CDC6Q99741 560 aa15.6■□□□□ 0.09
CHD3-205ENST00000449744 PREBQ9HCU5 417 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms