RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 TNFAIP8O95379 198 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 COX4I1P13073 169 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 PBLDP30039 288 aaPredicted RBP10.56□□□□□ -0.72
CTC1-202ENST00000449476 LRPAP1P30533 357 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 GABRB2P47870 512 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 MRPS6P82932 125 aaKnown RBP10.56□□□□□ -0.72
CTC1-202ENST00000449476 CDC16Q13042 620 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 CTBP1Q13363 440 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 TRIM60Q495X7 471 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 PIWIL4Q7Z3Z4 852 aaKnown RBP10.56□□□□□ -0.72
CTC1-202ENST00000449476 MILR1Q7Z6M3 343 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 OSCP1Q8WVF1 389 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 FIG4Q92562 907 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 RMND5BQ96G75 393 aaPredicted RBP10.56□□□□□ -0.72
CTC1-202ENST00000449476 CSPG4P5Q96PW8 444 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 YME1L1Q96TA2 773 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 HGH1Q9BTY7 390 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 HPS4Q9NQG7 708 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 CATSPERZQ9NTU4 200 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 PCDHGC3Q9UN70 934 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 PCDHA2Q9Y5H9 948 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 MAFBQ9Y5Q3 323 aaPredicted RBP10.56□□□□□ -0.72
CTC1-202ENST00000449476 PTCH2Q9Y6C5 1203 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 CLUHO75153 1309 aa10.56□□□□□ -0.72
CTC1-202ENST00000449476 LMO7Q8WWI1 1683 aa10.55□□□□□ -0.72
CTC1-202ENST00000449476 GPR25O00155 361 aa10.55□□□□□ -0.72
CTC1-202ENST00000449476 TFEBP19484 476 aa10.55□□□□□ -0.72
CTC1-202ENST00000449476 CCT8P50990 548 aa10.55□□□□□ -0.72
CTC1-202ENST00000449476 CRYBB1P53674 252 aaPredicted RBP10.55□□□□□ -0.72
CTC1-202ENST00000449476 WASHC5Q12768 1159 aa10.55□□□□□ -0.72
CTC1-202ENST00000449476 UBAP2LQ14157 1087 aaKnown RBP10.55□□□□□ -0.72
CTC1-202ENST00000449476 C9orf57Q5W0N0 161 aa10.55□□□□□ -0.72
CTC1-202ENST00000449476 NET1Q7Z628 596 aaPredicted RBP10.55□□□□□ -0.72
CTC1-202ENST00000449476 FAM35AQ86V20 835 aa10.55□□□□□ -0.72
CTC1-202ENST00000449476 ALYREFQ86V81 257 aaKnown RBP10.55□□□□□ -0.72
CTC1-202ENST00000449476 MARK4Q96L34 752 aa10.55□□□□□ -0.72
CTC1-202ENST00000449476 RNF145Q96MT1 663 aa10.55□□□□□ -0.72
CTC1-202ENST00000449476 APOBEC3GQ9HC16 384 aaKnown RBP10.55□□□□□ -0.72
CTC1-202ENST00000449476 GEMIN8Q9NWZ8 242 aaKnown RBP10.55□□□□□ -0.72
CTC1-202ENST00000449476 ST3GAL5Q9UNP4 418 aa10.55□□□□□ -0.72
CTC1-202ENST00000449476 PEX10O60683 326 aa10.55□□□□□ -0.72
CTC1-202ENST00000449476 LYPLA1O75608 230 aaPredicted RBP10.55□□□□□ -0.72
CTC1-202ENST00000449476 IL2P60568 153 aa10.55□□□□□ -0.72
CTC1-202ENST00000449476 SPIRE1Q08AE8 756 aa10.55□□□□□ -0.72
CTC1-202ENST00000449476 CAMK2GQ13555 558 aaPredicted RBP10.55□□□□□ -0.72
CTC1-202ENST00000449476 GPSM1Q86YR5 675 aa10.55□□□□□ -0.72
CTC1-202ENST00000449476 ATG16L2Q8NAA4 619 aa10.55□□□□□ -0.72
CTC1-202ENST00000449476 BHLHE22Q8NFJ8 381 aaPredicted RBP10.55□□□□□ -0.72
CTC1-202ENST00000449476 STAG3L4Q8TBR4 150 aa10.55□□□□□ -0.72
CTC1-202ENST00000449476 TFAP2BQ92481 460 aa10.55□□□□□ -0.72
CTC1-202ENST00000449476 NDNQ99608 321 aa10.55□□□□□ -0.72
CTC1-202ENST00000449476 GOLGA2P5Q9HBQ8 144 aa10.55□□□□□ -0.72
CTC1-202ENST00000449476 SEMA4BQ9NPR2 832 aaPredicted RBP10.55□□□□□ -0.72
CTC1-202ENST00000449476 GRHL1Q9NZI5 618 aa10.55□□□□□ -0.72
CTC1-202ENST00000449476 XPR1Q9UBH6 696 aa10.55□□□□□ -0.72
CTC1-202ENST00000449476 PRR23AA6NEV1 266 aa10.55□□□□□ -0.72
CTC1-202ENST00000449476 SEC22BO75396 215 aa10.55□□□□□ -0.72
CTC1-202ENST00000449476 SERPINA6P08185 405 aa10.55□□□□□ -0.72
CTC1-202ENST00000449476 LBPP18428 481 aa10.55□□□□□ -0.72
CTC1-202ENST00000449476 ADRA1BP35368 520 aa10.55□□□□□ -0.72
CTC1-202ENST00000449476 ATP5C1P36542 298 aaKnown RBP10.55□□□□□ -0.72
CTC1-202ENST00000449476 CLCN5P51795 746 aa10.55□□□□□ -0.72
CTC1-202ENST00000449476 HPCAP84074 193 aa10.55□□□□□ -0.72
CTC1-202ENST00000449476 DEPDC1Q5TB30 811 aa10.55□□□□□ -0.72
CTC1-202ENST00000449476 C10orf107Q8IVU9 208 aa10.55□□□□□ -0.72
CTC1-202ENST00000449476 DDHD1Q8NEL9 900 aa10.55□□□□□ -0.72
CTC1-202ENST00000449476 PPTC7Q8NI37 304 aa10.55□□□□□ -0.72
CTC1-202ENST00000449476 TLCD1Q96CP7 247 aa10.55□□□□□ -0.72
CTC1-202ENST00000449476 GIMAP4Q9NUV9 329 aa10.55□□□□□ -0.72
CTC1-202ENST00000449476 H2AFY2Q9P0M6 372 aaPredicted RBP10.55□□□□□ -0.72
CTC1-202ENST00000449476 PLA2G4CQ9UP65 541 aa10.55□□□□□ -0.72
CTC1-202ENST00000449476 RAP2CQ9Y3L5 183 aa10.55□□□□□ -0.72
CTC1-202ENST00000449476 SPEF2Q9C093 1822 aa10.55□□□□□ -0.72
CTC1-202ENST00000449476 BPGMP07738 259 aa10.54□□□□□ -0.72
CTC1-202ENST00000449476 EPB42P16452 691 aa10.54□□□□□ -0.72
CTC1-202ENST00000449476 EPHA3P29320 983 aa10.54□□□□□ -0.72
CTC1-202ENST00000449476 GPC1P35052 558 aa10.54□□□□□ -0.72
CTC1-202ENST00000449476 RAB10P61026 200 aa10.54□□□□□ -0.72
CTC1-202ENST00000449476 MRPS15P82914 257 aaKnown RBP10.54□□□□□ -0.72
CTC1-202ENST00000449476 MAD2L1Q13257 205 aaPredicted RBP10.54□□□□□ -0.72
CTC1-202ENST00000449476 BOP1Q14137 746 aaKnown RBP10.54□□□□□ -0.72
CTC1-202ENST00000449476 ZNF572Q7Z3I7 529 aaPredicted RBP10.54□□□□□ -0.72
CTC1-202ENST00000449476 ITIH5Q86UX2 942 aa10.54□□□□□ -0.72
CTC1-202ENST00000449476 STK32CQ86UX6 486 aa10.54□□□□□ -0.72
CTC1-202ENST00000449476 PGBD3Q8N328 593 aa10.54□□□□□ -0.72
CTC1-202ENST00000449476 TOP6BLQ8N6T0 577 aa10.54□□□□□ -0.72
CTC1-202ENST00000449476 PTGR2Q8N8N7 351 aaPredicted RBP10.54□□□□□ -0.72
CTC1-202ENST00000449476 SNRNP27Q8WVK2 155 aaKnown RBP10.54□□□□□ -0.72
CTC1-202ENST00000449476 SPOCK2Q92563 424 aa10.54□□□□□ -0.72
CTC1-202ENST00000449476 DLG3Q92796 817 aa10.54□□□□□ -0.72
CTC1-202ENST00000449476 SHISA4Q96DD7 197 aa10.54□□□□□ -0.72
CTC1-202ENST00000449476 SEMA3CQ99985 751 aa10.54□□□□□ -0.72
CTC1-202ENST00000449476 SEMA6AQ9H2E6 1030 aa10.54□□□□□ -0.72
CTC1-202ENST00000449476 ZMYM5Q9UJ78 669 aa10.54□□□□□ -0.72
CTC1-202ENST00000449476 ATP11BQ9Y2G3 1177 aa10.54□□□□□ -0.72
CTC1-202ENST00000449476 SMIM28A0A1B0GU29 152 aa10.54□□□□□ -0.72
CTC1-202ENST00000449476 RGSL1A5PLK6 1076 aa10.54□□□□□ -0.72
CTC1-202ENST00000449476 VPS4BO75351 444 aa10.54□□□□□ -0.72
CTC1-202ENST00000449476 CD48P09326 243 aa10.54□□□□□ -0.72
CTC1-202ENST00000449476 ICAM3P32942 547 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms