RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 WASHC5Q12768 1159 aa14.93□□□□□ -0.02
TNF-208ENST00000449264 NAA30Q147X3 362 aaPredicted RBP14.93□□□□□ -0.02
TNF-208ENST00000449264 GLE1Q53GS7 698 aaKnown RBP14.93□□□□□ -0.02
TNF-208ENST00000449264 NAIF1Q69YI7 327 aaPredicted RBP14.93□□□□□ -0.02
TNF-208ENST00000449264 ETFBKMTQ8IXQ9 262 aa14.93□□□□□ -0.02
TNF-208ENST00000449264 ALG14Q96F25 216 aa14.93□□□□□ -0.02
TNF-208ENST00000449264 LMLNQ96KR4 655 aa14.93□□□□□ -0.02
TNF-208ENST00000449264 AGAP3Q96P47 875 aa14.93□□□□□ -0.02
TNF-208ENST00000449264 SLC2A11Q9BYW1 496 aa14.93□□□□□ -0.02
TNF-208ENST00000449264 DPH5Q9H2P9 285 aa14.93□□□□□ -0.02
TNF-208ENST00000449264 PDFQ9HBH1 243 aa14.93□□□□□ -0.02
TNF-208ENST00000449264 IGSF9Q9P2J2 1179 aa14.93□□□□□ -0.02
TNF-208ENST00000449264 UBA2Q9UBT2 640 aaPredicted RBP14.93□□□□□ -0.02
TNF-208ENST00000449264 DMGDHQ9UI17 866 aaKnown RBP14.93□□□□□ -0.02
TNF-208ENST00000449264 INTS6Q9UL03 887 aaKnown RBP14.93□□□□□ -0.02
TNF-208ENST00000449264 UTP11Q9Y3A2 253 aaKnown RBP14.93□□□□□ -0.02
TNF-208ENST00000449264 COL4A2P08572 1712 aa14.92□□□□□ -0.02
TNF-208ENST00000449264 A0A0A0MRY4 1105 aa14.92□□□□□ -0.02
TNF-208ENST00000449264 ESYT3A0FGR9 886 aa14.92□□□□□ -0.02
TNF-208ENST00000449264 GUCY2DQ02846 1103 aa14.92□□□□□ -0.02
TNF-208ENST00000449264 GPS1Q13098 491 aa14.92□□□□□ -0.02
TNF-208ENST00000449264 SLC12A1Q13621 1099 aa14.92□□□□□ -0.02
TNF-208ENST00000449264 GEN1Q17RS7 908 aa14.92□□□□□ -0.02
TNF-208ENST00000449264 P3H1Q32P28 736 aa14.92□□□□□ -0.02
TNF-208ENST00000449264 GRAMD4Q6IC98 578 aa14.92□□□□□ -0.02
TNF-208ENST00000449264 ARHGEF18Q6ZSZ5 1173 aa14.92□□□□□ -0.02
TNF-208ENST00000449264 SYDE1Q6ZW31 735 aaPredicted RBP14.92□□□□□ -0.02
TNF-208ENST00000449264 AHI1Q8N157 1196 aa14.92□□□□□ -0.02
TNF-208ENST00000449264 ZNF567Q8N184 647 aa14.92□□□□□ -0.02
TNF-208ENST00000449264 SLC44A3Q8N4M1 653 aa14.92□□□□□ -0.02
TNF-208ENST00000449264 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.92□□□□□ -0.02
TNF-208ENST00000449264 MYRIPQ8NFW9 859 aa14.92□□□□□ -0.02
TNF-208ENST00000449264 RTP4Q96DX8 246 aa14.92□□□□□ -0.02
TNF-208ENST00000449264 ZNF419Q96HQ0 510 aaPredicted RBP14.92□□□□□ -0.02
TNF-208ENST00000449264 SPATA13Q96N96 652 aa14.92□□□□□ -0.02
TNF-208ENST00000449264 RAB17Q9H0T7 212 aa14.92□□□□□ -0.02
TNF-208ENST00000449264 DEC1Q9P2X7 70 aa14.92□□□□□ -0.02
TNF-208ENST00000449264 NEU2Q9Y3R4 380 aa14.92□□□□□ -0.02
TNF-208ENST00000449264 F5P12259 2224 aa14.91□□□□□ -0.02
TNF-208ENST00000449264 ZNF189O75820 626 aaPredicted RBP14.91□□□□□ -0.02
TNF-208ENST00000449264 PEX11BO96011 259 aa14.91□□□□□ -0.02
TNF-208ENST00000449264 RPL22P35268 128 aaKnown RBP14.91□□□□□ -0.02
TNF-208ENST00000449264 ADCY8P40145 1251 aa14.91□□□□□ -0.02
TNF-208ENST00000449264 IFI35P80217 286 aaPredicted RBP14.91□□□□□ -0.02
TNF-208ENST00000449264 SLC10A7Q0GE19 358 aa14.91□□□□□ -0.02
TNF-208ENST00000449264 MESP2Q0VG99 397 aa14.91□□□□□ -0.02
TNF-208ENST00000449264 ZNF235Q14590 738 aa14.91□□□□□ -0.02
TNF-208ENST00000449264 LBRQ14739 615 aaKnown RBP14.91□□□□□ -0.02
TNF-208ENST00000449264 ELF2Q15723 593 aa14.91□□□□□ -0.02
TNF-208ENST00000449264 ANKRD20A2Q5SQ80 823 aa14.91□□□□□ -0.02
TNF-208ENST00000449264 FAXCQ5TGI0 409 aa14.91□□□□□ -0.02
TNF-208ENST00000449264 TMCO4Q5TGY1 634 aa14.91□□□□□ -0.02
TNF-208ENST00000449264 ANKRD20A1Q5TYW2 823 aa14.91□□□□□ -0.02
TNF-208ENST00000449264 ANKRD20A3Q5VUR7 823 aa14.91□□□□□ -0.02
TNF-208ENST00000449264 MAML1Q92585 1016 aa14.91□□□□□ -0.02
TNF-208ENST00000449264 NXPE3Q969Y0 559 aa14.91□□□□□ -0.02
TNF-208ENST00000449264 ERP44Q9BS26 406 aa14.91□□□□□ -0.02
TNF-208ENST00000449264 RBM22Q9NW64 420 aaKnown RBP eCLIP14.91□□□□□ -0.02
TNF-208ENST00000449264 FBXO10Q9UK96 956 aa14.91□□□□□ -0.02
TNF-208ENST00000449264 C5orf60A6NFR6 353 aa14.9□□□□□ -0.02
TNF-208ENST00000449264 NARSO43776 548 aaKnown RBP14.9□□□□□ -0.02
TNF-208ENST00000449264 OPHN1O60890 802 aa14.9□□□□□ -0.02
TNF-208ENST00000449264 GCATO75600 419 aa14.9□□□□□ -0.02
TNF-208ENST00000449264 ZMPSTE24O75844 475 aa14.9□□□□□ -0.02
TNF-208ENST00000449264 HLA-DQB2P05538 268 aa14.9□□□□□ -0.02
TNF-208ENST00000449264 CISD3P0C7P0 127 aa14.9□□□□□ -0.02
TNF-208ENST00000449264 OPRD1P41143 372 aa14.9□□□□□ -0.02
TNF-208ENST00000449264 CTSOP43234 321 aaPredicted RBP14.9□□□□□ -0.02
TNF-208ENST00000449264 MMP13P45452 471 aa14.9□□□□□ -0.02
TNF-208ENST00000449264 RENBPP51606 427 aa14.9□□□□□ -0.02
TNF-208ENST00000449264 TUBB4BP68371 445 aa14.9□□□□□ -0.02
TNF-208ENST00000449264 BASP1P80723 227 aaKnown RBP14.9□□□□□ -0.02
TNF-208ENST00000449264 HNRNPDQ14103 355 aaKnown RBP14.9□□□□□ -0.02
TNF-208ENST00000449264 TEX44Q53QW1 395 aa14.9□□□□□ -0.02
TNF-208ENST00000449264 MARC1Q5VT66 337 aa14.9□□□□□ -0.02
TNF-208ENST00000449264 MBLAC2Q68D91 279 aa14.9□□□□□ -0.02
TNF-208ENST00000449264 RETSATQ6NUM9 610 aa14.9□□□□□ -0.02
TNF-208ENST00000449264 PID1Q7Z2X4 250 aa14.9□□□□□ -0.02
TNF-208ENST00000449264 ADIPOR2Q86V24 386 aa14.9□□□□□ -0.02
TNF-208ENST00000449264 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.9□□□□□ -0.02
TNF-208ENST00000449264 CCHCR1Q8TD31 782 aa14.9□□□□□ -0.02
TNF-208ENST00000449264 ACDQ96AP0 544 aa14.9□□□□□ -0.02
TNF-208ENST00000449264 CHFRQ96EP1 664 aa14.9□□□□□ -0.02
TNF-208ENST00000449264 RPL10LQ96L21 214 aaKnown RBP14.9□□□□□ -0.02
TNF-208ENST00000449264 CINPQ9BW66 212 aaPredicted RBP14.9□□□□□ -0.02
TNF-208ENST00000449264 CIPCQ9C0C6 399 aa14.9□□□□□ -0.02
TNF-208ENST00000449264 ANKZF1Q9H8Y5 726 aa14.9□□□□□ -0.02
TNF-208ENST00000449264 EPB41L5Q9HCM4 733 aa14.9□□□□□ -0.02
TNF-208ENST00000449264 NT5MQ9NPB1 228 aa14.9□□□□□ -0.02
TNF-208ENST00000449264 PAK5Q9P286 719 aa14.9□□□□□ -0.02
TNF-208ENST00000449264 SNX24Q9Y343 169 aa14.9□□□□□ -0.02
TNF-208ENST00000449264 TCF20Q9UGU0 1960 aaKnown RBP14.9□□□□□ -0.02
TNF-208ENST00000449264 LOC730098B7Z3J9 87 aa14.9□□□□□ -0.02
TNF-208ENST00000449264 ZBTB24O43167 697 aaPredicted RBP14.9□□□□□ -0.02
TNF-208ENST00000449264 POLR2EP19388 210 aaKnown RBP14.9□□□□□ -0.02
TNF-208ENST00000449264 RPL21P46778 160 aaKnown RBP14.9□□□□□ -0.02
TNF-208ENST00000449264 STK19P49842 368 aaPredicted RBP14.9□□□□□ -0.02
TNF-208ENST00000449264 PLK1P53350 603 aa14.9□□□□□ -0.02
TNF-208ENST00000449264 MAXP61244 160 aa14.9□□□□□ -0.02
TNF-208ENST00000449264 ITKQ08881 620 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms