RNA–Protein interactions for RNA: ENST00000449086.5

LINC00954-202, long intergenic non-protein coding RNA 954, humanhuman

TSL 1 (best) BASIC

Gene LINC00954, Length 2,995 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00954-202ENST00000449086 TARS2Q9BW92 718 aaKnown RBP8.28□□□□□ -1.08
LINC00954-202ENST00000449086 NUF2Q9BZD4 464 aa8.28□□□□□ -1.08
LINC00954-202ENST00000449086 IMPG2Q9BZV3 1241 aa8.28□□□□□ -1.08
LINC00954-202ENST00000449086 ARMC7Q9H6L4 198 aa8.28□□□□□ -1.08
LINC00954-202ENST00000449086 APOBEC3GQ9HC16 384 aaKnown RBP8.28□□□□□ -1.08
LINC00954-202ENST00000449086 FAM105AQ9NUU6 356 aa8.28□□□□□ -1.08
LINC00954-202ENST00000449086 TJP2Q9UDY2 1190 aa8.28□□□□□ -1.08
LINC00954-202ENST00000449086 SSX2IPQ9Y2D8 614 aa8.28□□□□□ -1.08
LINC00954-202ENST00000449086 MYO18AQ92614 2054 aaKnown RBP8.27□□□□□ -1.09
LINC00954-202ENST00000449086 STX16-NPEPL1H3BU86 382 aa8.27□□□□□ -1.09
LINC00954-202ENST00000449086 B4GALT5O43286 388 aa8.27□□□□□ -1.09
LINC00954-202ENST00000449086 DENRO43583 198 aaKnown RBP8.27□□□□□ -1.09
LINC00954-202ENST00000449086 CALB1P05937 261 aa8.27□□□□□ -1.09
LINC00954-202ENST00000449086 XRCC1P18887 633 aaPredicted RBP8.27□□□□□ -1.09
LINC00954-202ENST00000449086 KDELR1P24390 212 aa8.27□□□□□ -1.09
LINC00954-202ENST00000449086 SLC5A3P53794 718 aa8.27□□□□□ -1.09
LINC00954-202ENST00000449086 WDR5P61964 334 aaKnown RBP8.27□□□□□ -1.09
LINC00954-202ENST00000449086 YWHAZP63104 245 aaKnown RBP8.27□□□□□ -1.09
LINC00954-202ENST00000449086 CRADDP78560 199 aa8.27□□□□□ -1.09
LINC00954-202ENST00000449086 NXNQ6DKJ4 435 aa8.27□□□□□ -1.09
LINC00954-202ENST00000449086 PGM2L1Q6PCE3 622 aa8.27□□□□□ -1.09
LINC00954-202ENST00000449086 ZNF598Q86UK7 904 aaKnown RBP8.27□□□□□ -1.09
LINC00954-202ENST00000449086 C10orf107Q8IVU9 208 aa8.27□□□□□ -1.09
LINC00954-202ENST00000449086 ADGRF2Q8IZF7 708 aa8.27□□□□□ -1.09
LINC00954-202ENST00000449086 AHI1Q8N157 1196 aa8.27□□□□□ -1.09
LINC00954-202ENST00000449086 JOSD2Q8TAC2 188 aa8.27□□□□□ -1.09
LINC00954-202ENST00000449086 TMC2Q8TDI7 906 aa8.27□□□□□ -1.09
LINC00954-202ENST00000449086 ATP2A3Q93084 1043 aa8.27□□□□□ -1.09
LINC00954-202ENST00000449086 PPWD1Q96BP3 646 aaKnown RBP8.27□□□□□ -1.09
LINC00954-202ENST00000449086 THAP11Q96EK4 314 aa8.27□□□□□ -1.09
LINC00954-202ENST00000449086 MOCOSQ96EN8 888 aa8.27□□□□□ -1.09
LINC00954-202ENST00000449086 TMA16Q96EY4 203 aaKnown RBP8.27□□□□□ -1.09
LINC00954-202ENST00000449086 VCPIP1Q96JH7 1222 aa8.27□□□□□ -1.09
LINC00954-202ENST00000449086 PRO3102Q9H379 93 aa8.27□□□□□ -1.09
LINC00954-202ENST00000449086 C6orf203Q9P0P8 240 aaPredicted RBP8.27□□□□□ -1.09
LINC00954-202ENST00000449086 ITGA11Q9UKX5 1188 aa8.27□□□□□ -1.09
LINC00954-202ENST00000449086 GIT1Q9Y2X7 761 aa8.27□□□□□ -1.09
LINC00954-202ENST00000449086 TTLL3Q9Y4R7 772 aa8.27□□□□□ -1.09
LINC00954-202ENST00000449086 NUB1Q9Y5A7 615 aa8.27□□□□□ -1.09
LINC00954-202ENST00000449086 CEPT1Q9Y6K0 416 aa8.27□□□□□ -1.09
LINC00954-202ENST00000449086 RALGAPA2Q2PPJ7 1873 aa8.27□□□□□ -1.09
LINC00954-202ENST00000449086 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.27□□□□□ -1.09
LINC00954-202ENST00000449086 ARHGEF37A1IGU5 675 aa8.27□□□□□ -1.09
LINC00954-202ENST00000449086 OGTO15294 1046 aa8.27□□□□□ -1.09
LINC00954-202ENST00000449086 MGEA5O60502 916 aa8.27□□□□□ -1.09
LINC00954-202ENST00000449086 SNNO75324 88 aaPredicted RBP8.27□□□□□ -1.09
LINC00954-202ENST00000449086 LRCH4O75427 683 aa8.27□□□□□ -1.09
LINC00954-202ENST00000449086 THOP1P52888 689 aa8.27□□□□□ -1.09
LINC00954-202ENST00000449086 CDH6P55285 790 aa8.27□□□□□ -1.09
LINC00954-202ENST00000449086 MCCD1P59942 119 aaPredicted RBP8.27□□□□□ -1.09
LINC00954-202ENST00000449086 ORC1Q13415 861 aa8.27□□□□□ -1.09
LINC00954-202ENST00000449086 TMEM132AQ24JP5 1023 aa8.27□□□□□ -1.09
LINC00954-202ENST00000449086 RTN4RL1Q86UN2 441 aaPredicted RBP8.27□□□□□ -1.09
LINC00954-202ENST00000449086 SNX32Q86XE0 403 aa8.27□□□□□ -1.09
LINC00954-202ENST00000449086 CPNE9Q8IYJ1 553 aa8.27□□□□□ -1.09
LINC00954-202ENST00000449086 MYO1HQ8N1T3 1032 aa8.27□□□□□ -1.09
LINC00954-202ENST00000449086 TMEM35BQ8NCS4 154 aa8.27□□□□□ -1.09
LINC00954-202ENST00000449086 GFM2Q969S9 779 aaKnown RBP8.27□□□□□ -1.09
LINC00954-202ENST00000449086 CPB2Q96IY4 423 aa8.27□□□□□ -1.09
LINC00954-202ENST00000449086 MFSD14AQ96MC6 490 aa8.27□□□□□ -1.09
LINC00954-202ENST00000449086 SERPINI1Q99574 410 aa8.27□□□□□ -1.09
LINC00954-202ENST00000449086 PKP2Q99959 881 aa8.27□□□□□ -1.09
LINC00954-202ENST00000449086 TMEM79Q9BSE2 394 aa8.27□□□□□ -1.09
LINC00954-202ENST00000449086 HAUS8Q9BT25 410 aa8.27□□□□□ -1.09
LINC00954-202ENST00000449086 OXCT2Q9BYC2 517 aaPredicted RBP8.27□□□□□ -1.09
LINC00954-202ENST00000449086 CDT1Q9H211 546 aa8.27□□□□□ -1.09
LINC00954-202ENST00000449086 PLEKHA5Q9HAU0 1116 aa8.27□□□□□ -1.09
LINC00954-202ENST00000449086 RAB26Q9ULW5 256 aa8.27□□□□□ -1.09
LINC00954-202ENST00000449086 SORCS3Q9UPU3 1222 aa8.27□□□□□ -1.09
LINC00954-202ENST00000449086 PMM2O15305 246 aa8.26□□□□□ -1.09
LINC00954-202ENST00000449086 AP1G1O43747 822 aa8.26□□□□□ -1.09
LINC00954-202ENST00000449086 ZBTB14O43829 449 aa8.26□□□□□ -1.09
LINC00954-202ENST00000449086 CSDE1O75534 798 aaKnown RBP8.26□□□□□ -1.09
LINC00954-202ENST00000449086 SPAG6O75602 509 aa8.26□□□□□ -1.09
LINC00954-202ENST00000449086 VNN1O95497 513 aa8.26□□□□□ -1.09
LINC00954-202ENST00000449086 HSPA4LO95757 839 aa8.26□□□□□ -1.09
LINC00954-202ENST00000449086 IL1BP01584 269 aa8.26□□□□□ -1.09
LINC00954-202ENST00000449086 F7P08709 466 aaPredicted RBP8.26□□□□□ -1.09
LINC00954-202ENST00000449086 KRT7P08729 469 aa8.26□□□□□ -1.09
LINC00954-202ENST00000449086 ALOX15P16050 662 aaPredicted RBP8.26□□□□□ -1.09
LINC00954-202ENST00000449086 CD97P48960 835 aa8.26□□□□□ -1.09
LINC00954-202ENST00000449086 MAPK10P53779 464 aa8.26□□□□□ -1.09
LINC00954-202ENST00000449086 PPP2R5DQ14738 602 aa8.26□□□□□ -1.09
LINC00954-202ENST00000449086 TCTN1Q2MV58 587 aa8.26□□□□□ -1.09
LINC00954-202ENST00000449086 EML3Q32P44 896 aa8.26□□□□□ -1.09
LINC00954-202ENST00000449086 PPM1JQ5JR12 505 aa8.26□□□□□ -1.09
LINC00954-202ENST00000449086 TEDDM1Q5T9Z0 273 aa8.26□□□□□ -1.09
LINC00954-202ENST00000449086 SCYL2Q6P3W7 929 aa8.26□□□□□ -1.09
LINC00954-202ENST00000449086 C16orf87Q6PH81 154 aa8.26□□□□□ -1.09
LINC00954-202ENST00000449086 PACS1Q6VY07 963 aa8.26□□□□□ -1.09
LINC00954-202ENST00000449086 BBS12Q6ZW61 710 aa8.26□□□□□ -1.09
LINC00954-202ENST00000449086 MAVSQ7Z434 540 aa8.26□□□□□ -1.09
LINC00954-202ENST00000449086 TOP1MTQ969P6 601 aa8.26□□□□□ -1.09
LINC00954-202ENST00000449086 MARK4Q96L34 752 aa8.26□□□□□ -1.09
LINC00954-202ENST00000449086 FBXL18Q96ME1 805 aa8.26□□□□□ -1.09
LINC00954-202ENST00000449086 WDR55Q9H6Y2 383 aaPredicted RBP8.26□□□□□ -1.09
LINC00954-202ENST00000449086 INIPQ9NRY2 104 aa8.26□□□□□ -1.09
LINC00954-202ENST00000449086 FAIMQ9NVQ4 179 aa8.26□□□□□ -1.09
LINC00954-202ENST00000449086 ZNF358Q9NW07 568 aa8.26□□□□□ -1.09
LINC00954-202ENST00000449086 RBAKQ9NYW8 714 aaPredicted RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms