RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 CCNB1P14635 433 aa14.33□□□□□ -0.11
SHMT2-203ENST00000449049 PTPN3P26045 913 aa14.33□□□□□ -0.11
SHMT2-203ENST00000449049 TUBB4BP68371 445 aa14.33□□□□□ -0.11
SHMT2-203ENST00000449049 ZBTB17Q13105 803 aa14.33□□□□□ -0.11
SHMT2-203ENST00000449049 HNRNPDQ14103 355 aaKnown RBP14.33□□□□□ -0.11
SHMT2-203ENST00000449049 GEN1Q17RS7 908 aa14.33□□□□□ -0.11
SHMT2-203ENST00000449049 P3H1Q32P28 736 aa14.33□□□□□ -0.11
SHMT2-203ENST00000449049 JAMLQ86YT9 394 aa14.33□□□□□ -0.11
SHMT2-203ENST00000449049 TEX26Q8N6G2 289 aa14.33□□□□□ -0.11
SHMT2-203ENST00000449049 GLIS1Q8NBF1 620 aa14.33□□□□□ -0.11
SHMT2-203ENST00000449049 ATXN2LQ8WWM7 1075 aaKnown RBP14.33□□□□□ -0.11
SHMT2-203ENST00000449049 TTC17Q96AE7 1141 aa14.33□□□□□ -0.11
SHMT2-203ENST00000449049 VAT1Q99536 393 aa14.33□□□□□ -0.11
SHMT2-203ENST00000449049 LRRC1Q9BTT6 524 aa14.33□□□□□ -0.11
SHMT2-203ENST00000449049 MIA3Q5JRA6 1907 aa14.33□□□□□ -0.12
SHMT2-203ENST00000449049 NARSO43776 548 aaKnown RBP14.33□□□□□ -0.12
SHMT2-203ENST00000449049 GCATO75600 419 aa14.33□□□□□ -0.12
SHMT2-203ENST00000449049 CD160O95971 181 aa14.33□□□□□ -0.12
SHMT2-203ENST00000449049 SRFP11831 508 aa14.33□□□□□ -0.12
SHMT2-203ENST00000449049 NUMBP49757 651 aa14.33□□□□□ -0.12
SHMT2-203ENST00000449049 NRLP54845 237 aa14.33□□□□□ -0.12
SHMT2-203ENST00000449049 PFKPQ01813 784 aa14.33□□□□□ -0.12
SHMT2-203ENST00000449049 PTK6Q13882 451 aa14.33□□□□□ -0.12
SHMT2-203ENST00000449049 RFTN1Q14699 578 aaPredicted RBP14.33□□□□□ -0.12
SHMT2-203ENST00000449049 TMEM215Q68D42 235 aa14.33□□□□□ -0.12
SHMT2-203ENST00000449049 ZNF419Q96HQ0 510 aaPredicted RBP14.33□□□□□ -0.12
SHMT2-203ENST00000449049 PNKPQ96T60 521 aa14.33□□□□□ -0.12
SHMT2-203ENST00000449049 PCDH9Q9HC56 1237 aa14.33□□□□□ -0.12
SHMT2-203ENST00000449049 SEPT10Q9P0V9 454 aa14.33□□□□□ -0.12
SHMT2-203ENST00000449049 UBA2Q9UBT2 640 aaPredicted RBP14.33□□□□□ -0.12
SHMT2-203ENST00000449049 SHROOM3Q8TF72 1996 aa14.32□□□□□ -0.12
SHMT2-203ENST00000449049 A0A0A0MRY4 1105 aa14.32□□□□□ -0.12
SHMT2-203ENST00000449049 STK10O94804 968 aaKnown RBP14.32□□□□□ -0.12
SHMT2-203ENST00000449049 IFNB1P01574 187 aa14.32□□□□□ -0.12
SHMT2-203ENST00000449049 KRT14P02533 472 aa14.32□□□□□ -0.12
SHMT2-203ENST00000449049 SOX9P48436 509 aa14.32□□□□□ -0.12
SHMT2-203ENST00000449049 RENBPP51606 427 aa14.32□□□□□ -0.12
SHMT2-203ENST00000449049 GEMIN4P57678 1058 aaKnown RBP14.32□□□□□ -0.12
SHMT2-203ENST00000449049 KDSRQ06136 332 aa14.32□□□□□ -0.12
SHMT2-203ENST00000449049 SULT2A1Q06520 285 aa14.32□□□□□ -0.12
SHMT2-203ENST00000449049 SLC10A7Q0GE19 358 aa14.32□□□□□ -0.12
SHMT2-203ENST00000449049 MESP2Q0VG99 397 aa14.32□□□□□ -0.12
SHMT2-203ENST00000449049 PREPLQ4J6C6 727 aaPredicted RBP14.32□□□□□ -0.12
SHMT2-203ENST00000449049 TEX44Q53QW1 395 aa14.32□□□□□ -0.12
SHMT2-203ENST00000449049 TMCO4Q5TGY1 634 aa14.32□□□□□ -0.12
SHMT2-203ENST00000449049 MBLAC2Q68D91 279 aa14.32□□□□□ -0.12
SHMT2-203ENST00000449049 NAIF1Q69YI7 327 aaPredicted RBP14.32□□□□□ -0.12
SHMT2-203ENST00000449049 RETSATQ6NUM9 610 aa14.32□□□□□ -0.12
SHMT2-203ENST00000449049 ZNF567Q8N184 647 aa14.32□□□□□ -0.12
SHMT2-203ENST00000449049 CCDC89Q8N998 374 aa14.32□□□□□ -0.12
SHMT2-203ENST00000449049 TERB1Q8NA31 727 aa14.32□□□□□ -0.12
SHMT2-203ENST00000449049 NSMCE1Q8WV22 266 aa14.32□□□□□ -0.12
SHMT2-203ENST00000449049 SPATA13Q96N96 652 aa14.32□□□□□ -0.12
SHMT2-203ENST00000449049 C8orf33Q9H7E9 229 aaPredicted RBP14.32□□□□□ -0.12
SHMT2-203ENST00000449049 DUSP12Q9UNI6 340 aa14.32□□□□□ -0.12
SHMT2-203ENST00000449049 MUC22E2RYF6 1773 aaPredicted RBP14.32□□□□□ -0.12
SHMT2-203ENST00000449049 SPECC1L-ADORA2AF8WAN1 911 aa14.32□□□□□ -0.12
SHMT2-203ENST00000449049 OPHN1O60890 802 aa14.32□□□□□ -0.12
SHMT2-203ENST00000449049 ETS1P14921 441 aa14.32□□□□□ -0.12
SHMT2-203ENST00000449049 CTHP32929 405 aa14.32□□□□□ -0.12
SHMT2-203ENST00000449049 MRPS25P82663 173 aaKnown RBP14.32□□□□□ -0.12
SHMT2-203ENST00000449049 LBRQ14739 615 aaKnown RBP14.32□□□□□ -0.12
SHMT2-203ENST00000449049 EIF4HQ15056 248 aaKnown RBP14.32□□□□□ -0.12
SHMT2-203ENST00000449049 PPP1R7Q15435 360 aa14.32□□□□□ -0.12
SHMT2-203ENST00000449049 INO80DQ53TQ3 878 aaPredicted RBP14.32□□□□□ -0.12
SHMT2-203ENST00000449049 ANKRD20A2Q5SQ80 823 aa14.32□□□□□ -0.12
SHMT2-203ENST00000449049 TEX35Q5T0J7 233 aa14.32□□□□□ -0.12
SHMT2-203ENST00000449049 ANKRD20A1Q5TYW2 823 aa14.32□□□□□ -0.12
SHMT2-203ENST00000449049 MARC1Q5VT66 337 aa14.32□□□□□ -0.12
SHMT2-203ENST00000449049 ANKRD20A3Q5VUR7 823 aa14.32□□□□□ -0.12
SHMT2-203ENST00000449049 LINGO4Q6UY18 593 aa14.32□□□□□ -0.12
SHMT2-203ENST00000449049 LEKR1Q6ZMV7 388 aa14.32□□□□□ -0.12
SHMT2-203ENST00000449049 PRUNE1Q86TP1 453 aa14.32□□□□□ -0.12
SHMT2-203ENST00000449049 RALGPS2Q86X27 583 aaPredicted RBP14.32□□□□□ -0.12
SHMT2-203ENST00000449049 SUGP1Q8IWZ8 645 aaKnown RBP14.32□□□□□ -0.12
SHMT2-203ENST00000449049 CCDC110Q8TBZ0 833 aa14.32□□□□□ -0.12
SHMT2-203ENST00000449049 CASKIN2Q8WXE0 1202 aa14.32□□□□□ -0.12
SHMT2-203ENST00000449049 TRIM51Q9BSJ1 452 aa14.32□□□□□ -0.12
SHMT2-203ENST00000449049 TRHDEQ9UKU6 1024 aa14.32□□□□□ -0.12
SHMT2-203ENST00000449049 ACTL7AQ9Y615 435 aa14.32□□□□□ -0.12
SHMT2-203ENST00000449049 JCHAINP01591 159 aa14.31□□□□□ -0.12
SHMT2-203ENST00000449049 ZSCAN5DPP0CG00 497 aa14.31□□□□□ -0.12
SHMT2-203ENST00000449049 BMP1P13497 986 aa14.31□□□□□ -0.12
SHMT2-203ENST00000449049 GLULP15104 373 aa14.31□□□□□ -0.12
SHMT2-203ENST00000449049 POLR2EP19388 210 aaKnown RBP14.31□□□□□ -0.12
SHMT2-203ENST00000449049 RPL22P35268 128 aaKnown RBP14.31□□□□□ -0.12
SHMT2-203ENST00000449049 CTSOP43234 321 aaPredicted RBP14.31□□□□□ -0.12
SHMT2-203ENST00000449049 MMP13P45452 471 aa14.31□□□□□ -0.12
SHMT2-203ENST00000449049 SERPINH1P50454 418 aaKnown RBP14.31□□□□□ -0.12
SHMT2-203ENST00000449049 VASPP50552 380 aaPredicted RBP14.31□□□□□ -0.12
SHMT2-203ENST00000449049 SLC20A2Q08357 652 aa14.31□□□□□ -0.12
SHMT2-203ENST00000449049 KCTD19Q17RG1 926 aaPredicted RBP14.31□□□□□ -0.12
SHMT2-203ENST00000449049 CNTD1Q8N815 330 aa14.31□□□□□ -0.12
SHMT2-203ENST00000449049 CCHCR1Q8TD31 782 aa14.31□□□□□ -0.12
SHMT2-203ENST00000449049 MSANTD3Q96H12 275 aa14.31□□□□□ -0.12
SHMT2-203ENST00000449049 TEKT5Q96M29 485 aa14.31□□□□□ -0.12
SHMT2-203ENST00000449049 CEP41Q9BYV8 373 aa14.31□□□□□ -0.12
SHMT2-203ENST00000449049 HEBP1Q9NRV9 189 aa14.31□□□□□ -0.12
SHMT2-203ENST00000449049 RBM22Q9NW64 420 aaKnown RBP eCLIP14.31□□□□□ -0.128e-10■■■■■ 40.7
SHMT2-203ENST00000449049 PAK5Q9P286 719 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms