RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 BORCS7-ASMTA0A0B4J1R7 106 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 CLDN25C9JDP6 229 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 XKRYO14609 159 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 SLC9A3P48764 834 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 OXCT1P55809 520 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 MED22Q15528 200 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 SMAD1Q15797 465 aaKnown RBP9.05□□□□□ -0.96
NIPBL-202ENST00000448238 TBRG1Q3YBR2 411 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 RFTN2Q52LD8 501 aaPredicted RBP9.05□□□□□ -0.96
NIPBL-202ENST00000448238 ZNF790Q6PG37 636 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 CCNI2Q6ZMN8 369 aaPredicted RBP9.05□□□□□ -0.96
NIPBL-202ENST00000448238 OR52K1Q8NGK4 314 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 SPATA22Q8NHS9 363 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 OSBP2Q969R2 916 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 BORCS7Q96B45 105 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 LRRC1Q9BTT6 524 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 TREM1Q9NP99 234 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 SLC24A2Q9UI40 661 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 PACSIN3Q9UKS6 424 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 EVPLQ92817 2033 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 MAP3K6O95382 1288 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 KLHL35Q6PF15 583 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 FAM83HQ6ZRV2 1179 aaPredicted RBP9.05□□□□□ -0.96
NIPBL-202ENST00000448238 KANSL1Q7Z3B3 1105 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 FOXP4Q8IVH2 680 aaPredicted RBP9.05□□□□□ -0.96
NIPBL-202ENST00000448238 OR5B12Q96R08 314 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 TAS2R7Q9NYW3 318 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 TNPO3Q9Y5L0 923 aaKnown RBP9.05□□□□□ -0.96
NIPBL-202ENST00000448238 ABCC5O15440 1437 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 TCP10L2B9ZVM9 353 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 SLC30A4O14863 429 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 SLC28A2O43868 658 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 GPR162Q16538 588 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 CCDC58Q4VC31 144 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 ATF7IP2Q5U623 682 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 SLC35G2Q8TBE7 412 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 RMDN3Q96TC7 470 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 FAIM2Q9BWQ8 316 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 TTLL2Q9BWV7 592 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 ZNF302Q9NR11 478 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 TUBG2Q9NRH3 451 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 ADGRG1Q9Y653 693 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 CYP3A7-CYP3A51PA0A087WV96 503 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 VSTM5A8MXK1 200 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 CYP3A7P24462 503 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 BTDP43251 543 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 SNRPFP62306 86 aaKnown RBP9.05□□□□□ -0.96
NIPBL-202ENST00000448238 COASYQ13057 564 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 TFDP3Q5H9I0 405 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 PRAMEF17Q5VTA0 474 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 PPP1R18Q6NYC8 613 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 CLP1Q92989 425 aaKnown RBP9.05□□□□□ -0.96
NIPBL-202ENST00000448238 PANX3Q96QZ0 392 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 GLS2Q9UI32 602 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 PRAMEF33A0A0G2JMD5 474 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 GTPBP1O00178 669 aaKnown RBP9.05□□□□□ -0.96
NIPBL-202ENST00000448238 PRAMEF10O60809 474 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 FDX1P10109 184 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 EIF2AK2P19525 551 aaKnown RBP9.05□□□□□ -0.96
NIPBL-202ENST00000448238 CACNB2Q08289 660 aaPredicted RBP9.05□□□□□ -0.96
NIPBL-202ENST00000448238 GPR158Q5T848 1215 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 SLC25A41Q8N5S1 370 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 SEC14L1Q92503 715 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 KAT5Q92993 513 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 ZNF700Q9H0M5 742 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 OAS3Q9Y6K5 1087 aaKnown RBP9.05□□□□□ -0.96
NIPBL-202ENST00000448238 WDR19Q8NEZ3 1342 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 OR6C6A6NF89 314 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 MSH4O15457 936 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 STARD3Q14849 445 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 MTDHQ86UE4 582 aaKnown RBP9.05□□□□□ -0.96
NIPBL-202ENST00000448238 TMC8Q8IU68 726 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 ADGRG2Q8IZP9 1017 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 FAM160A2Q8N612 972 aaPredicted RBP9.05□□□□□ -0.96
NIPBL-202ENST00000448238 WDSUB1Q8N9V3 476 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 THAP6Q8TBB0 222 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 MCEEQ96PE7 176 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 SAV1Q9H4B6 383 aaPredicted RBP9.05□□□□□ -0.96
NIPBL-202ENST00000448238 OSBPL3Q9H4L5 887 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 FAM105AQ9NUU6 356 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 AGAP1Q9UPQ3 857 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 C2CD2Q9Y426 696 aa9.05□□□□□ -0.96
NIPBL-202ENST00000448238 GCATO75600 419 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 BNIP2Q12982 314 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 MFSD14CQ5VZR4 134 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 IQSEC1Q6DN90 963 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 BORAQ6PGQ7 559 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 SDR16C5Q8N3Y7 309 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 HDAC7Q8WUI4 952 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 SHCBP1LQ9BZQ2 653 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 PIF1Q9H611 641 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 MAGEE1Q9HCI5 957 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 TDRKHQ9Y2W6 561 aaKnown RBP9.04□□□□□ -0.96
NIPBL-202ENST00000448238 EMSYQ7Z589 1322 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 SLC16A3O15427 465 aaKnown RBP9.04□□□□□ -0.96
NIPBL-202ENST00000448238 PMPCBO75439 489 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 SNCGO76070 127 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 CYP1A1P04798 512 aaPredicted RBP9.04□□□□□ -0.96
NIPBL-202ENST00000448238 COX7A2P14406 83 aa9.04□□□□□ -0.96
NIPBL-202ENST00000448238 OR3A3P47888 321 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms