RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 XPR1Q9UBH6 696 aa16.89■□□□□ 0.29
TCOF1-206ENST00000445265 LSM7Q9UK45 103 aaKnown RBP16.89■□□□□ 0.29
TCOF1-206ENST00000445265 NCF1BA6NI72 391 aaPredicted RBP16.89■□□□□ 0.29
TCOF1-206ENST00000445265 NCF1CA8MVU1 366 aaPredicted RBP16.89■□□□□ 0.29
TCOF1-206ENST00000445265 MFSD11O43934 449 aa16.89■□□□□ 0.29
TCOF1-206ENST00000445265 NCF1P14598 390 aaPredicted RBP16.89■□□□□ 0.29
TCOF1-206ENST00000445265 SQLEQ14534 574 aa16.89■□□□□ 0.29
TCOF1-206ENST00000445265 ATP6AP1LQ52LC2 224 aa16.89■□□□□ 0.29
TCOF1-206ENST00000445265 TRPM4Q8TD43 1214 aa16.89■□□□□ 0.29
TCOF1-206ENST00000445265 TINF2Q9BSI4 451 aa16.89■□□□□ 0.29
TCOF1-206ENST00000445265 GPBP1L1Q9HC44 474 aaPredicted RBP16.89■□□□□ 0.29
TCOF1-206ENST00000445265 WWOXQ9NZC7 414 aa16.89■□□□□ 0.29
TCOF1-206ENST00000445265 COMMD3-BMI1R4GMX3 469 aa16.89■□□□□ 0.29
TCOF1-206ENST00000445265 GPX6P59796 221 aa16.88■□□□□ 0.29
TCOF1-206ENST00000445265 MAB21L3Q8N8X9 362 aa16.88■□□□□ 0.29
TCOF1-206ENST00000445265 DIS3LQ8TF46 1054 aaKnown RBP16.88■□□□□ 0.29
TCOF1-206ENST00000445265 OSCP1Q8WVF1 389 aa16.88■□□□□ 0.29
TCOF1-206ENST00000445265 RCN3Q96D15 328 aa16.88■□□□□ 0.29
TCOF1-206ENST00000445265 KCTD14Q9BQ13 255 aaPredicted RBP16.88■□□□□ 0.29
TCOF1-206ENST00000445265 LRPAP1P30533 357 aa16.88■□□□□ 0.29
TCOF1-206ENST00000445265 INPP1P49441 399 aa16.88■□□□□ 0.29
TCOF1-206ENST00000445265 KPNA1P52294 538 aaPredicted RBP16.88■□□□□ 0.29
TCOF1-206ENST00000445265 GSCP56915 257 aaPredicted RBP16.88■□□□□ 0.29
TCOF1-206ENST00000445265 ZNF280AP59817 542 aaPredicted RBP16.88■□□□□ 0.29
TCOF1-206ENST00000445265 PRKD1Q15139 912 aaPredicted RBP16.88■□□□□ 0.29
TCOF1-206ENST00000445265 POLG2Q9UHN1 485 aa16.88■□□□□ 0.29
TCOF1-206ENST00000445265 FBXO5Q9UKT4 447 aa16.88■□□□□ 0.29
TCOF1-206ENST00000445265 PSMD13Q9UNM6 376 aa16.88■□□□□ 0.29
TCOF1-206ENST00000445265 SOWAHBA6NEL2 793 aa16.88■□□□□ 0.29
TCOF1-206ENST00000445265 POMCP01189 267 aa16.88■□□□□ 0.29
TCOF1-206ENST00000445265 UQCRBP14927 111 aa16.88■□□□□ 0.29
TCOF1-206ENST00000445265 OGDHQ02218 1023 aa16.88■□□□□ 0.29
TCOF1-206ENST00000445265 MTA1Q13330 715 aa16.88■□□□□ 0.29
TCOF1-206ENST00000445265 SGO1Q5FBB7 561 aa16.88■□□□□ 0.29
TCOF1-206ENST00000445265 AAASQ9NRG9 546 aa16.88■□□□□ 0.29
TCOF1-206ENST00000445265 SCN3BQ9NY72 215 aa16.88■□□□□ 0.29
TCOF1-206ENST00000445265 PLA2G4CQ9UP65 541 aa16.88■□□□□ 0.29
TCOF1-206ENST00000445265 SNRPB2P08579 225 aaKnown RBP16.87■□□□□ 0.29
TCOF1-206ENST00000445265 AKT1P31749 480 aa16.87■□□□□ 0.29
TCOF1-206ENST00000445265 PQLC1Q8N2U9 271 aa16.87■□□□□ 0.29
TCOF1-206ENST00000445265 CLPTM1LQ96KA5 538 aa16.87■□□□□ 0.29
TCOF1-206ENST00000445265 C9orf16Q9BUW7 83 aa16.87■□□□□ 0.29
TCOF1-206ENST00000445265 OLA1Q9NTK5 396 aaKnown RBP16.87■□□□□ 0.29
TCOF1-206ENST00000445265 COL18A1P39060 1754 aa16.87■□□□□ 0.29
TCOF1-206ENST00000445265 PEX11AO75192 247 aa16.87■□□□□ 0.29
TCOF1-206ENST00000445265 CCDC166P0CW27 439 aa16.87■□□□□ 0.29
TCOF1-206ENST00000445265 SLC10A6Q3KNW5 377 aa16.87■□□□□ 0.29
TCOF1-206ENST00000445265 CTXN3Q4LDR2 81 aa16.87■□□□□ 0.29
TCOF1-206ENST00000445265 SH3GL1Q99961 368 aa16.87■□□□□ 0.29
TCOF1-206ENST00000445265 ARHGEF4Q9NR80 690 aa16.87■□□□□ 0.29
TCOF1-206ENST00000445265 TUBGCP4Q9UGJ1 667 aa16.87■□□□□ 0.29
TCOF1-206ENST00000445265 CRLS1Q9UJA2 301 aa16.87■□□□□ 0.29
TCOF1-206ENST00000445265 PACSIN3Q9UKS6 424 aa16.87■□□□□ 0.29
TCOF1-206ENST00000445265 IRS2Q9Y4H2 1338 aa16.87■□□□□ 0.29
TCOF1-206ENST00000445265 TUBGCP6Q96RT7 1819 aa16.87■□□□□ 0.29
TCOF1-206ENST00000445265 C15orf38-AP3S2A0A0A6YYH1 394 aa16.87■□□□□ 0.29
TCOF1-206ENST00000445265 SLC15A5A6NIM6 579 aa16.87■□□□□ 0.29
TCOF1-206ENST00000445265 M0R3G1 203 aa16.87■□□□□ 0.29
TCOF1-206ENST00000445265 SMIM10L2AP0DMW4 78 aa16.87■□□□□ 0.29
TCOF1-206ENST00000445265 SMIM10L2BP0DMW5 78 aa16.87■□□□□ 0.29
TCOF1-206ENST00000445265 COL6A2P12110 1019 aa16.87■□□□□ 0.29
TCOF1-206ENST00000445265 SLC25A11Q02978 314 aaKnown RBP16.87■□□□□ 0.29
TCOF1-206ENST00000445265 TEX44Q53QW1 395 aa16.87■□□□□ 0.29
TCOF1-206ENST00000445265 ARPINQ7Z6K5 226 aa16.87■□□□□ 0.29
TCOF1-206ENST00000445265 BDH2Q9BUT1 245 aa16.87■□□□□ 0.29
TCOF1-206ENST00000445265 COLEC11Q9BWP8 271 aa16.87■□□□□ 0.29
TCOF1-206ENST00000445265 PCDHB8Q9UN66 801 aa16.87■□□□□ 0.29
TCOF1-206ENST00000445265 MYH1P12882 1939 aa16.87■□□□□ 0.29
TCOF1-206ENST00000445265 INPP4BO15327 924 aa16.87■□□□□ 0.29
TCOF1-206ENST00000445265 HOXD10P28358 340 aa16.87■□□□□ 0.29
TCOF1-206ENST00000445265 ZNF157P51786 506 aaPredicted RBP16.87■□□□□ 0.29
TCOF1-206ENST00000445265 LIMK2P53671 638 aa16.87■□□□□ 0.29
TCOF1-206ENST00000445265 SIX1Q15475 284 aaPredicted RBP16.87■□□□□ 0.29
TCOF1-206ENST00000445265 B3GNT6Q6ZMB0 384 aa16.87■□□□□ 0.29
TCOF1-206ENST00000445265 FAM9CQ8IZT9 166 aa16.87■□□□□ 0.29
TCOF1-206ENST00000445265 NSMCE2Q96MF7 247 aa16.87■□□□□ 0.29
TCOF1-206ENST00000445265 NXF3Q9H4D5 531 aaKnown RBP16.87■□□□□ 0.29
TCOF1-206ENST00000445265 EIF2B3Q9NR50 452 aaKnown RBP16.87■□□□□ 0.29
TCOF1-206ENST00000445265 TCRBV7S3A2A0A539 114 aa16.86■□□□□ 0.29
TCOF1-206ENST00000445265 KLF11O14901 512 aa16.86■□□□□ 0.29
TCOF1-206ENST00000445265 CLOCKO15516 846 aa16.86■□□□□ 0.29
TCOF1-206ENST00000445265 FKBP9O95302 570 aa16.86■□□□□ 0.29
TCOF1-206ENST00000445265 ACSBG2Q5FVE4 666 aa16.86■□□□□ 0.29
TCOF1-206ENST00000445265 FKBP9P1Q75LS8 142 aa16.86■□□□□ 0.29
TCOF1-206ENST00000445265 TTC7BQ86TV6 843 aa16.86■□□□□ 0.29
TCOF1-206ENST00000445265 ADCK1Q86TW2 530 aa16.86■□□□□ 0.29
TCOF1-206ENST00000445265 SYT11Q9BT88 431 aa16.86■□□□□ 0.29
TCOF1-206ENST00000445265 ADGRE3Q9BY15 652 aa16.86■□□□□ 0.29
TCOF1-206ENST00000445265 TRPV2Q9Y5S1 764 aa16.86■□□□□ 0.29
TCOF1-206ENST00000445265 MYH11P35749 1972 aa16.86■□□□□ 0.29
TCOF1-206ENST00000445265 ADAMTS7Q9UKP4 1686 aa16.86■□□□□ 0.29
TCOF1-206ENST00000445265 A0A087WXM4 84 aa16.86■□□□□ 0.29
TCOF1-206ENST00000445265 TSPAN1O60635 241 aa16.86■□□□□ 0.29
TCOF1-206ENST00000445265 LDLRP01130 860 aa16.86■□□□□ 0.29
TCOF1-206ENST00000445265 CSH1P0DML2 217 aa16.86■□□□□ 0.29
TCOF1-206ENST00000445265 CSH2P0DML3 217 aa16.86■□□□□ 0.29
TCOF1-206ENST00000445265 SEMA5AQ13591 1074 aa16.86■□□□□ 0.29
TCOF1-206ENST00000445265 MPP2Q14168 576 aa16.86■□□□□ 0.29
TCOF1-206ENST00000445265 ELMOD1Q8N336 334 aa16.86■□□□□ 0.29
TCOF1-206ENST00000445265 DDHD1Q8NEL9 900 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms