RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 APOL1O14791 398 aa14.39□□□□□ -0.11
SSBP3-208ENST00000444533 DCLK1O15075 740 aa14.39□□□□□ -0.11
SSBP3-208ENST00000444533 DNTTP04053 509 aa14.39□□□□□ -0.11
SSBP3-208ENST00000444533 CD48P09326 243 aa14.39□□□□□ -0.11
SSBP3-208ENST00000444533 CTNNA1P35221 906 aaKnown RBP14.39□□□□□ -0.11
SSBP3-208ENST00000444533 PAPOLAP51003 745 aaKnown RBP14.39□□□□□ -0.11
SSBP3-208ENST00000444533 COPS2P61201 443 aa14.39□□□□□ -0.11
SSBP3-208ENST00000444533 RAD51Q06609 339 aa14.39□□□□□ -0.11
SSBP3-208ENST00000444533 CCDC15Q0P6D6 951 aa14.39□□□□□ -0.11
SSBP3-208ENST00000444533 MMRN1Q13201 1228 aa14.39□□□□□ -0.11
SSBP3-208ENST00000444533 CAMK2GQ13555 558 aaPredicted RBP14.39□□□□□ -0.11
SSBP3-208ENST00000444533 ELAVL3Q14576 367 aaKnown RBP14.39□□□□□ -0.11
SSBP3-208ENST00000444533 TFDP3Q5H9I0 405 aa14.39□□□□□ -0.11
SSBP3-208ENST00000444533 TMCO4Q5TGY1 634 aa14.39□□□□□ -0.11
SSBP3-208ENST00000444533 CCDC181Q5TID7 509 aa14.39□□□□□ -0.11
SSBP3-208ENST00000444533 FAM46CQ5VWP2 391 aa14.39□□□□□ -0.11
SSBP3-208ENST00000444533 ZNF776Q68DI1 518 aaPredicted RBP14.39□□□□□ -0.11
SSBP3-208ENST00000444533 LINGO4Q6UY18 593 aa14.39□□□□□ -0.11
SSBP3-208ENST00000444533 WDR5BQ86VZ2 330 aa14.39□□□□□ -0.11
SSBP3-208ENST00000444533 CPNE8Q86YQ8 564 aa14.39□□□□□ -0.11
SSBP3-208ENST00000444533 TMPRSS6Q8IU80 811 aa14.39□□□□□ -0.11
SSBP3-208ENST00000444533 PCDH20Q8N6Y1 951 aaKnown RBP14.39□□□□□ -0.11
SSBP3-208ENST00000444533 ZNF366Q8N895 744 aa14.39□□□□□ -0.11
SSBP3-208ENST00000444533 TRIM58Q8NG06 486 aa14.39□□□□□ -0.11
SSBP3-208ENST00000444533 EXD1Q8NHP7 514 aa14.39□□□□□ -0.11
SSBP3-208ENST00000444533 RAPGEF5Q92565 580 aa14.39□□□□□ -0.11
SSBP3-208ENST00000444533 TSC1Q92574 1164 aa14.39□□□□□ -0.11
SSBP3-208ENST00000444533 SIPA1Q96FS4 1042 aa14.39□□□□□ -0.11
SSBP3-208ENST00000444533 MRGPRX3Q96LB0 322 aa14.39□□□□□ -0.11
SSBP3-208ENST00000444533 RNF157Q96PX1 679 aa14.39□□□□□ -0.11
SSBP3-208ENST00000444533 GOLPH3Q9H4A6 298 aa14.39□□□□□ -0.11
SSBP3-208ENST00000444533 LRRC19Q9H756 370 aa14.39□□□□□ -0.11
SSBP3-208ENST00000444533 UBA2Q9UBT2 640 aaPredicted RBP14.39□□□□□ -0.11
SSBP3-208ENST00000444533 HCN2Q9UL51 889 aa14.39□□□□□ -0.11
SSBP3-208ENST00000444533 RAB23Q9ULC3 237 aa14.39□□□□□ -0.11
SSBP3-208ENST00000444533 SCML1Q9UN30 329 aa14.39□□□□□ -0.11
SSBP3-208ENST00000444533 PCDHA3Q9Y5H8 950 aa14.39□□□□□ -0.11
SSBP3-208ENST00000444533 A0A1W2PQF6 199 aa14.38□□□□□ -0.11
SSBP3-208ENST00000444533 C1QTNF3-AMACRE9PGA6 284 aa14.38□□□□□ -0.11
SSBP3-208ENST00000444533 SRCP12931 536 aa14.38□□□□□ -0.11
SSBP3-208ENST00000444533 COL9A1P20849 921 aa14.38□□□□□ -0.11
SSBP3-208ENST00000444533 CTNNA2P26232 953 aa14.38□□□□□ -0.11
SSBP3-208ENST00000444533 PXNP49023 591 aaPredicted RBP14.38□□□□□ -0.11
SSBP3-208ENST00000444533 FNTBP49356 437 aa14.38□□□□□ -0.11
SSBP3-208ENST00000444533 ARSEP51690 589 aa14.38□□□□□ -0.11
SSBP3-208ENST00000444533 SNRPD1P62314 119 aaKnown RBP14.38□□□□□ -0.11
SSBP3-208ENST00000444533 ZBTB16Q05516 673 aa14.38□□□□□ -0.11
SSBP3-208ENST00000444533 RFTN1Q14699 578 aaPredicted RBP14.38□□□□□ -0.11
SSBP3-208ENST00000444533 INO80DQ53TQ3 878 aaPredicted RBP14.38□□□□□ -0.11
SSBP3-208ENST00000444533 ARTNQ5T4W7 220 aa14.38□□□□□ -0.11
SSBP3-208ENST00000444533 TIGD7Q6NT04 549 aaPredicted RBP14.38□□□□□ -0.11
SSBP3-208ENST00000444533 KIAA1211LQ6NV74 962 aa14.38□□□□□ -0.11
SSBP3-208ENST00000444533 C22orf39Q6P5X5 142 aa14.38□□□□□ -0.11
SSBP3-208ENST00000444533 CEP68Q76N32 757 aa14.38□□□□□ -0.11
SSBP3-208ENST00000444533 MAML2Q8IZL2 1156 aaPredicted RBP14.38□□□□□ -0.11
SSBP3-208ENST00000444533 RYBPQ8N488 228 aaPredicted RBP14.38□□□□□ -0.11
SSBP3-208ENST00000444533 MDGA1Q8NFP4 955 aa14.38□□□□□ -0.11
SSBP3-208ENST00000444533 GANCQ8TET4 914 aa14.38□□□□□ -0.11
SSBP3-208ENST00000444533 ISG20Q96AZ6 181 aaKnown RBP14.38□□□□□ -0.11
SSBP3-208ENST00000444533 FAF2Q96CS3 445 aa14.38□□□□□ -0.11
SSBP3-208ENST00000444533 ERLEC1Q96DZ1 483 aa14.38□□□□□ -0.11
SSBP3-208ENST00000444533 SLC39A8Q9C0K1 460 aa14.38□□□□□ -0.11
SSBP3-208ENST00000444533 PRSS16Q9NQE7 514 aa14.38□□□□□ -0.11
SSBP3-208ENST00000444533 DYRK4Q9NR20 520 aa14.38□□□□□ -0.11
SSBP3-208ENST00000444533 POLR3BQ9NW08 1133 aaPredicted RBP14.38□□□□□ -0.11
SSBP3-208ENST00000444533 C2orf42Q9NWW7 574 aa14.38□□□□□ -0.11
SSBP3-208ENST00000444533 IPO11Q9UI26 975 aaKnown RBP14.38□□□□□ -0.11
SSBP3-208ENST00000444533 NCKAP1Q9Y2A7 1128 aa14.38□□□□□ -0.11
SSBP3-208ENST00000444533 ARIH1Q9Y4X5 557 aaPredicted RBP14.38□□□□□ -0.11
SSBP3-208ENST00000444533 MYO18AQ92614 2054 aaKnown RBP14.37□□□□□ -0.11
SSBP3-208ENST00000444533 GOLGA6L9A6NEM1 432 aa14.37□□□□□ -0.11
SSBP3-208ENST00000444533 ANTXRLA6NF34 631 aa14.37□□□□□ -0.11
SSBP3-208ENST00000444533 ALOX15BO15296 676 aa14.37□□□□□ -0.11
SSBP3-208ENST00000444533 MAP3K13O43283 966 aa14.37□□□□□ -0.11
SSBP3-208ENST00000444533 PRAMEF11O60813 436 aa14.37□□□□□ -0.11
SSBP3-208ENST00000444533 SIN3BO75182 1162 aa14.37□□□□□ -0.11
SSBP3-208ENST00000444533 FTCDO95954 541 aa14.37□□□□□ -0.11
SSBP3-208ENST00000444533 ADH1BP00325 375 aa14.37□□□□□ -0.11
SSBP3-208ENST00000444533 CHRM1P11229 460 aaPredicted RBP14.37□□□□□ -0.11
SSBP3-208ENST00000444533 GABRG2P18507 467 aa14.37□□□□□ -0.11
SSBP3-208ENST00000444533 GLDCP23378 1020 aa14.37□□□□□ -0.11
SSBP3-208ENST00000444533 IL4RP24394 825 aa14.37□□□□□ -0.11
SSBP3-208ENST00000444533 RENBPP51606 427 aa14.37□□□□□ -0.11
SSBP3-208ENST00000444533 RHOAP61586 193 aa14.37□□□□□ -0.11
SSBP3-208ENST00000444533 ARF5P84085 180 aa14.37□□□□□ -0.11
SSBP3-208ENST00000444533 IL10RBQ08334 325 aa14.37□□□□□ -0.11
SSBP3-208ENST00000444533 PAFAH1B3Q15102 231 aaKnown RBP14.37□□□□□ -0.11
SSBP3-208ENST00000444533 KAZNQ674X7 775 aa14.37□□□□□ -0.11
SSBP3-208ENST00000444533 SPOCD1Q6ZMY3 1216 aa14.37□□□□□ -0.11
SSBP3-208ENST00000444533 Q6ZVU0 165 aa14.37□□□□□ -0.11
SSBP3-208ENST00000444533 NT5DC3Q86UY8 548 aa14.37□□□□□ -0.11
SSBP3-208ENST00000444533 RASSF3Q86WH2 238 aa14.37□□□□□ -0.11
SSBP3-208ENST00000444533 LRRC57Q8N9N7 239 aa14.37□□□□□ -0.11
SSBP3-208ENST00000444533 CCNYQ8ND76 341 aa14.37□□□□□ -0.11
SSBP3-208ENST00000444533 PRSS33Q8NF86 280 aa14.37□□□□□ -0.11
SSBP3-208ENST00000444533 PCDH19Q8TAB3 1148 aa14.37□□□□□ -0.11
SSBP3-208ENST00000444533 MYO19Q96H55 970 aa14.37□□□□□ -0.11
SSBP3-208ENST00000444533 MRGPRX1Q96LB2 322 aa14.37□□□□□ -0.11
SSBP3-208ENST00000444533 ZNF599Q96NL3 588 aa14.37□□□□□ -0.11
SSBP3-208ENST00000444533 FERMT1Q9BQL6 677 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms