RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 STK40Q8N2I9 435 aa14.36□□□□□ -0.11
TREX1-202ENST00000444177 CCDC185Q8N715 623 aa14.36□□□□□ -0.11
TREX1-202ENST00000444177 KDF1Q8NAX2 398 aaPredicted RBP14.36□□□□□ -0.11
TREX1-202ENST00000444177 SETD7Q8WTS6 366 aaKnown RBP14.36□□□□□ -0.11
TREX1-202ENST00000444177 GATA6Q92908 595 aa14.36□□□□□ -0.11
TREX1-202ENST00000444177 PTPRN2Q92932 1015 aa14.36□□□□□ -0.11
TREX1-202ENST00000444177 ZNF653Q96CK0 615 aa14.36□□□□□ -0.11
TREX1-202ENST00000444177 OMDQ99983 421 aa14.36□□□□□ -0.11
TREX1-202ENST00000444177 ORAI3Q9BRQ5 295 aa14.36□□□□□ -0.11
TREX1-202ENST00000444177 FEM1AQ9BSK4 669 aa14.36□□□□□ -0.11
TREX1-202ENST00000444177 RBSNQ9H1K0 784 aa14.36□□□□□ -0.11
TREX1-202ENST00000444177 PARVAQ9NVD7 372 aa14.36□□□□□ -0.11
TREX1-202ENST00000444177 ADAMTS1Q9UHI8 967 aa14.36□□□□□ -0.11
TREX1-202ENST00000444177 KLK13Q9UKR3 277 aa14.36□□□□□ -0.11
TREX1-202ENST00000444177 PCOLCE2Q9UKZ9 415 aa14.36□□□□□ -0.11
TREX1-202ENST00000444177 ANKRD6Q9Y2G4 727 aa14.36□□□□□ -0.11
TREX1-202ENST00000444177 TBC1D30Q9Y2I9 924 aa14.36□□□□□ -0.11
TREX1-202ENST00000444177 MSRB2Q9Y3D2 182 aa14.36□□□□□ -0.11
TREX1-202ENST00000444177 SNX11Q9Y5W9 270 aa14.36□□□□□ -0.11
TREX1-202ENST00000444177 CFAP47Q6ZTR5 3102 aa14.36□□□□□ -0.11
TREX1-202ENST00000444177 ANKRD11Q6UB99 2663 aaPredicted RBP14.35□□□□□ -0.11
TREX1-202ENST00000444177 FAM221BA6H8Z2 402 aa14.35□□□□□ -0.11
TREX1-202ENST00000444177 KCNK3O14649 394 aa14.35□□□□□ -0.11
TREX1-202ENST00000444177 FTLP02792 175 aaPredicted RBP14.35□□□□□ -0.11
TREX1-202ENST00000444177 GYPCP04921 128 aa14.35□□□□□ -0.11
TREX1-202ENST00000444177 ADRA1BP35368 520 aa14.35□□□□□ -0.11
TREX1-202ENST00000444177 GRIA4P48058 902 aa14.35□□□□□ -0.11
TREX1-202ENST00000444177 KRT83P78385 493 aa14.35□□□□□ -0.11
TREX1-202ENST00000444177 RWDD4Q6NW29 188 aaKnown RBP14.35□□□□□ -0.11
TREX1-202ENST00000444177 NCEH1Q6PIU2 408 aa14.35□□□□□ -0.11
TREX1-202ENST00000444177 RAB44Q7Z6P3 723 aaPredicted RBP14.35□□□□□ -0.11
TREX1-202ENST00000444177 SETD3Q86TU7 594 aaPredicted RBP14.35□□□□□ -0.11
TREX1-202ENST00000444177 GAS2L3Q86XJ1 694 aa14.35□□□□□ -0.11
TREX1-202ENST00000444177 DRC7Q8IY82 874 aa14.35□□□□□ -0.11
TREX1-202ENST00000444177 FRS2Q8WU20 508 aa14.35□□□□□ -0.11
TREX1-202ENST00000444177 CENPIQ92674 756 aaPredicted RBP14.35□□□□□ -0.11
TREX1-202ENST00000444177 NTAN1Q96AB6 310 aa14.35□□□□□ -0.11
TREX1-202ENST00000444177 ALG14Q96F25 216 aa14.35□□□□□ -0.11
TREX1-202ENST00000444177 VCPIP1Q96JH7 1222 aa14.35□□□□□ -0.11
TREX1-202ENST00000444177 CNPY3Q9BT09 278 aa14.35□□□□□ -0.11
TREX1-202ENST00000444177 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.35□□□□□ -0.11
TREX1-202ENST00000444177 CNOT8Q9UFF9 292 aaKnown RBP14.35□□□□□ -0.11
TREX1-202ENST00000444177 FZD4Q9ULV1 537 aa14.35□□□□□ -0.11
TREX1-202ENST00000444177 CAPN11Q9UMQ6 739 aa14.35□□□□□ -0.11
TREX1-202ENST00000444177 LUC7L2Q9Y383 392 aaKnown RBP14.35□□□□□ -0.11
TREX1-202ENST00000444177 PCDHGB2Q9Y5G2 931 aa14.35□□□□□ -0.11
TREX1-202ENST00000444177 OR51B4Q9Y5P0 310 aa14.35□□□□□ -0.11
TREX1-202ENST00000444177 ZZEF1O43149 2961 aa14.35□□□□□ -0.11
TREX1-202ENST00000444177 ZFYVE26Q68DK2 2539 aa14.35□□□□□ -0.11
TREX1-202ENST00000444177 KNTC1P50748 2209 aa14.34□□□□□ -0.11
TREX1-202ENST00000444177 ASPMQ8IZT6 3477 aa14.34□□□□□ -0.11
TREX1-202ENST00000444177 PKD1L2Q7Z442 2459 aa14.34□□□□□ -0.11
TREX1-202ENST00000444177 A0A1W2PPC4 97 aa14.34□□□□□ -0.11
TREX1-202ENST00000444177 LRRC72A6NJI9 287 aa14.34□□□□□ -0.11
TREX1-202ENST00000444177 RTN2O75298 545 aa14.34□□□□□ -0.11
TREX1-202ENST00000444177 SERPING1P05155 500 aa14.34□□□□□ -0.11
TREX1-202ENST00000444177 FTH1P19P0C7X4 201 aa14.34□□□□□ -0.11
TREX1-202ENST00000444177 VAV1P15498 845 aa14.34□□□□□ -0.11
TREX1-202ENST00000444177 GOT1P17174 413 aa14.34□□□□□ -0.11
TREX1-202ENST00000444177 C5AR1P21730 350 aa14.34□□□□□ -0.11
TREX1-202ENST00000444177 PSMA2P25787 234 aa14.34□□□□□ -0.11
TREX1-202ENST00000444177 PSMD8P48556 350 aa14.34□□□□□ -0.11
TREX1-202ENST00000444177 VASPP50552 380 aaPredicted RBP14.34□□□□□ -0.11
TREX1-202ENST00000444177 OGDHQ02218 1023 aa14.34□□□□□ -0.11
TREX1-202ENST00000444177 ELAVL3Q14576 367 aaKnown RBP14.34□□□□□ -0.11
TREX1-202ENST00000444177 SUZ12Q15022 739 aaKnown RBP14.34□□□□□ -0.11
TREX1-202ENST00000444177 ACCSLQ4AC99 568 aa14.34□□□□□ -0.11
TREX1-202ENST00000444177 EFHC2Q5JST6 749 aa14.34□□□□□ -0.11
TREX1-202ENST00000444177 KCNT1Q5JUK3 1230 aa14.34□□□□□ -0.11
TREX1-202ENST00000444177 MANEALQ5VSG8 457 aa14.34□□□□□ -0.11
TREX1-202ENST00000444177 HGSNATQ68CP4 663 aa14.34□□□□□ -0.11
TREX1-202ENST00000444177 LAYNQ6UX15 382 aa14.34□□□□□ -0.11
TREX1-202ENST00000444177 TMC6Q7Z403 805 aa14.34□□□□□ -0.11
TREX1-202ENST00000444177 SLFN11Q7Z7L1 901 aa14.34□□□□□ -0.11
TREX1-202ENST00000444177 GLRX5Q86SX6 157 aa14.34□□□□□ -0.11
TREX1-202ENST00000444177 VPS36Q86VN1 386 aa14.34□□□□□ -0.11
TREX1-202ENST00000444177 AADATQ8N5Z0 425 aa14.34□□□□□ -0.11
TREX1-202ENST00000444177 PNPLA1Q8N8W4 532 aa14.34□□□□□ -0.11
TREX1-202ENST00000444177 DCAF4L2Q8NA75 395 aa14.34□□□□□ -0.11
TREX1-202ENST00000444177 OR2T34Q8NGX1 318 aa14.34□□□□□ -0.11
TREX1-202ENST00000444177 RHBDD1Q8TEB9 315 aa14.34□□□□□ -0.11
TREX1-202ENST00000444177 SYN2Q92777 582 aaPredicted RBP14.34□□□□□ -0.11
TREX1-202ENST00000444177 TBC1D31Q96DN5 1066 aa14.34□□□□□ -0.11
TREX1-202ENST00000444177 TRIM11Q96F44 468 aa14.34□□□□□ -0.11
TREX1-202ENST00000444177 PSMB7Q99436 277 aa14.34□□□□□ -0.11
TREX1-202ENST00000444177 C2orf49Q9BVC5 232 aaPredicted RBP14.34□□□□□ -0.11
TREX1-202ENST00000444177 EBF2Q9HAK2 575 aa14.34□□□□□ -0.11
TREX1-202ENST00000444177 MYO1AQ9UBC5 1043 aa14.34□□□□□ -0.11
TREX1-202ENST00000444177 PPARGC1AQ9UBK2 798 aaKnown RBP14.34□□□□□ -0.11
TREX1-202ENST00000444177 OR12D3Q9UGF7 316 aa14.34□□□□□ -0.11
TREX1-202ENST00000444177 VPS51Q9UID3 782 aa14.34□□□□□ -0.11
TREX1-202ENST00000444177 ZMIZ1Q9ULJ6 1067 aa14.34□□□□□ -0.11
TREX1-202ENST00000444177 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.34□□□□□ -0.11
TREX1-202ENST00000444177 BZW2Q9Y6E2 419 aaKnown RBP14.34□□□□□ -0.11
TREX1-202ENST00000444177 SCINQ9Y6U3 715 aa14.34□□□□□ -0.11
TREX1-202ENST00000444177 FAM208BQ5VWN6 2430 aa14.34□□□□□ -0.11
TREX1-202ENST00000444177 GOLGA4Q13439 2230 aaKnown RBP14.34□□□□□ -0.11
TREX1-202ENST00000444177 A0A0D9SEW6 157 aa14.33□□□□□ -0.12
TREX1-202ENST00000444177 TMEM8BA6NDV4 472 aa14.33□□□□□ -0.12
TREX1-202ENST00000444177 C10orf142B7Z368 130 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms