RNA–Protein interactions for RNA: ENST00000441821.5

SYN3-204, Transcript of synapsin III, humanhuman

TSL 1 (best)

Gene SYN3, Length 855 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-204ENST00000441821 APOEP02649 317 aa10.26□□□□□ -0.77
SYN3-204ENST00000441821 GP1BBP13224 206 aa10.26□□□□□ -0.77
SYN3-204ENST00000441821 NME1P15531 152 aaKnown RBP10.26□□□□□ -0.77
SYN3-204ENST00000441821 NUMBP49757 651 aa10.26□□□□□ -0.77
SYN3-204ENST00000441821 UBAP2LQ14157 1087 aaKnown RBP10.26□□□□□ -0.77
SYN3-204ENST00000441821 FZD2Q14332 565 aa10.26□□□□□ -0.77
SYN3-204ENST00000441821 NR0B2Q15466 257 aa10.26□□□□□ -0.77
SYN3-204ENST00000441821 TTC39BQ5VTQ0 682 aaPredicted RBP10.26□□□□□ -0.77
SYN3-204ENST00000441821 Q6ZVU0 165 aa10.26□□□□□ -0.77
SYN3-204ENST00000441821 BEND5Q7L4P6 421 aa10.26□□□□□ -0.77
SYN3-204ENST00000441821 CHSY1Q86X52 802 aa10.26□□□□□ -0.77
SYN3-204ENST00000441821 CCAR2Q8N163 923 aaKnown RBP10.26□□□□□ -0.77
SYN3-204ENST00000441821 EXTL1Q92935 676 aa10.26□□□□□ -0.77
SYN3-204ENST00000441821 ALG14Q96F25 216 aa10.26□□□□□ -0.77
SYN3-204ENST00000441821 BTN2A3PQ96KV6 586 aa10.26□□□□□ -0.77
SYN3-204ENST00000441821 BMFQ96LC9 184 aa10.26□□□□□ -0.77
SYN3-204ENST00000441821 SRRTQ9BXP5 876 aaKnown RBP10.26□□□□□ -0.77
SYN3-204ENST00000441821 SEPT3Q9UH03 358 aa10.26□□□□□ -0.77
SYN3-204ENST00000441821 ACSL6Q9UKU0 697 aa10.26□□□□□ -0.77
SYN3-204ENST00000441821 ZFR2Q9UPR6 939 aaKnown RBP10.26□□□□□ -0.77
SYN3-204ENST00000441821 NAALADL1Q9UQQ1 740 aa10.26□□□□□ -0.77
SYN3-204ENST00000441821 COQ4Q9Y3A0 265 aa10.26□□□□□ -0.77
SYN3-204ENST00000441821 TDRD6O60522 2096 aaKnown RBP10.26□□□□□ -0.77
SYN3-204ENST00000441821 TCAF2A6NFQ2 919 aa10.25□□□□□ -0.77
SYN3-204ENST00000441821 F5H5T6 163 aa10.25□□□□□ -0.77
SYN3-204ENST00000441821 AQP9O43315 295 aa10.25□□□□□ -0.77
SYN3-204ENST00000441821 ACTN4O43707 911 aaKnown RBP10.25□□□□□ -0.77
SYN3-204ENST00000441821 MYL1P05976 194 aa10.25□□□□□ -0.77
SYN3-204ENST00000441821 CTSLP07711 333 aa10.25□□□□□ -0.77
SYN3-204ENST00000441821 PAEPP09466 180 aa10.25□□□□□ -0.77
SYN3-204ENST00000441821 FAM87AP0C7U9 286 aa10.25□□□□□ -0.77
SYN3-204ENST00000441821 SLC5A2P31639 672 aa10.25□□□□□ -0.77
SYN3-204ENST00000441821 RPIAP49247 311 aa10.25□□□□□ -0.77
SYN3-204ENST00000441821 PDX1P52945 283 aa10.25□□□□□ -0.77
SYN3-204ENST00000441821 EIF3IQ13347 325 aaKnown RBP10.25□□□□□ -0.77
SYN3-204ENST00000441821 CNGA2Q16280 664 aa10.25□□□□□ -0.77
SYN3-204ENST00000441821 TMEM259Q4ZIN3 620 aa10.25□□□□□ -0.77
SYN3-204ENST00000441821 ZC3H12AQ5D1E8 599 aaKnown RBP10.25□□□□□ -0.77
SYN3-204ENST00000441821 PERM1Q5SV97 790 aa10.25□□□□□ -0.77
SYN3-204ENST00000441821 OR6B2Q6IFH4 312 aa10.25□□□□□ -0.77
SYN3-204ENST00000441821 CXorf57Q6NSI4 855 aaKnown RBP10.25□□□□□ -0.77
SYN3-204ENST00000441821 CRTC1Q6UUV9 634 aa10.25□□□□□ -0.77
SYN3-204ENST00000441821 KYAT3Q6YP21 454 aaKnown RBP10.25□□□□□ -0.77
SYN3-204ENST00000441821 PTAR1Q7Z6K3 402 aaPredicted RBP10.25□□□□□ -0.77
SYN3-204ENST00000441821 C14orf80Q86SX3 495 aa10.25□□□□□ -0.77
SYN3-204ENST00000441821 TAC4Q86UU9 113 aa10.25□□□□□ -0.77
SYN3-204ENST00000441821 PARGQ86W56 976 aa10.25□□□□□ -0.77
SYN3-204ENST00000441821 SH2D3CQ8N5H7 860 aa10.25□□□□□ -0.77
SYN3-204ENST00000441821 UBR7Q8N806 425 aa10.25□□□□□ -0.77
SYN3-204ENST00000441821 TMIEQ8NEW7 156 aa10.25□□□□□ -0.77
SYN3-204ENST00000441821 TFAP2BQ92481 460 aa10.25□□□□□ -0.77
SYN3-204ENST00000441821 GLMNQ92990 594 aa10.25□□□□□ -0.77
SYN3-204ENST00000441821 NAT6Q93015 286 aa10.25□□□□□ -0.77
SYN3-204ENST00000441821 LIN37Q96GY3 246 aaPredicted RBP10.25□□□□□ -0.77
SYN3-204ENST00000441821 IL12RB2Q99665 862 aa10.25□□□□□ -0.77
SYN3-204ENST00000441821 PRMT1Q99873 361 aaKnown RBP10.25□□□□□ -0.77
SYN3-204ENST00000441821 FEM1AQ9BSK4 669 aa10.25□□□□□ -0.77
SYN3-204ENST00000441821 BOCQ9BWV1 1114 aa10.25□□□□□ -0.77
SYN3-204ENST00000441821 MIS12Q9H081 205 aa10.25□□□□□ -0.77
SYN3-204ENST00000441821 KLF15Q9UIH9 416 aa10.25□□□□□ -0.77
SYN3-204ENST00000441821 PCDHA7Q9UN72 937 aa10.25□□□□□ -0.77
SYN3-204ENST00000441821 FARP1Q9Y4F1 1045 aaPredicted RBP10.25□□□□□ -0.77
SYN3-204ENST00000441821 POM121BA6NF01 834 aa10.24□□□□□ -0.77
SYN3-204ENST00000441821 KCNU1A8MYU2 1149 aa10.24□□□□□ -0.77
SYN3-204ENST00000441821 M0QYV0 167 aa10.24□□□□□ -0.77
SYN3-204ENST00000441821 KPNA3O00505 521 aaPredicted RBP10.24□□□□□ -0.77
SYN3-204ENST00000441821 NTN3O00634 580 aaPredicted RBP10.24□□□□□ -0.77
SYN3-204ENST00000441821 PLD2O14939 933 aa10.24□□□□□ -0.77
SYN3-204ENST00000441821 SART1O43290 800 aaKnown RBP10.24□□□□□ -0.77
SYN3-204ENST00000441821 PCDH8O95206 1070 aa10.24□□□□□ -0.77
SYN3-204ENST00000441821 IGLV3-25P01717 112 aa10.24□□□□□ -0.77
SYN3-204ENST00000441821 CHRNA3P32297 505 aa10.24□□□□□ -0.77
SYN3-204ENST00000441821 RABIFP47224 123 aa10.24□□□□□ -0.77
SYN3-204ENST00000441821 ME1P48163 572 aa10.24□□□□□ -0.77
SYN3-204ENST00000441821 TLE1Q04724 770 aa10.24□□□□□ -0.77
SYN3-204ENST00000441821 SPIDRQ14159 915 aa10.24□□□□□ -0.77
SYN3-204ENST00000441821 STILQ15468 1287 aa10.24□□□□□ -0.77
SYN3-204ENST00000441821 DEFB133Q30KQ1 61 aa10.24□□□□□ -0.77
SYN3-204ENST00000441821 CBWD6Q4V339 395 aa10.24□□□□□ -0.77
SYN3-204ENST00000441821 CBWD3Q5JTY5 395 aa10.24□□□□□ -0.77
SYN3-204ENST00000441821 RABGAP1LQ5R372 815 aa10.24□□□□□ -0.77
SYN3-204ENST00000441821 CBWD5Q5RIA9 395 aa10.24□□□□□ -0.77
SYN3-204ENST00000441821 SYPL2Q5VXT5 272 aa10.24□□□□□ -0.77
SYN3-204ENST00000441821 SEL1L3Q68CR1 1132 aa10.24□□□□□ -0.77
SYN3-204ENST00000441821 ERN2Q76MJ5 926 aaKnown RBP10.24□□□□□ -0.77
SYN3-204ENST00000441821 CIR1Q86X95 450 aaPredicted RBP10.24□□□□□ -0.77
SYN3-204ENST00000441821 GUF1Q8N442 669 aaKnown RBP10.24□□□□□ -0.77
SYN3-204ENST00000441821 FBXO39Q8N4B4 442 aa10.24□□□□□ -0.77
SYN3-204ENST00000441821 ATP6V0D2Q8N8Y2 350 aa10.24□□□□□ -0.77
SYN3-204ENST00000441821 RNF34Q969K3 372 aa10.24□□□□□ -0.77
SYN3-204ENST00000441821 FAM149B1Q96BN6 582 aa10.24□□□□□ -0.77
SYN3-204ENST00000441821 CCDC114Q96M63 670 aa10.24□□□□□ -0.77
SYN3-204ENST00000441821 CCDC3Q9BQI4 270 aa10.24□□□□□ -0.77
SYN3-204ENST00000441821 ZSWIM1Q9BR11 485 aa10.24□□□□□ -0.77
SYN3-204ENST00000441821 TRIM62Q9BVG3 475 aa10.24□□□□□ -0.77
SYN3-204ENST00000441821 HDAC8Q9BY41 377 aa10.24□□□□□ -0.77
SYN3-204ENST00000441821 SLC17A9Q9BYT1 436 aa10.24□□□□□ -0.77
SYN3-204ENST00000441821 DYRK4Q9NR20 520 aa10.24□□□□□ -0.77
SYN3-204ENST00000441821 WDR70Q9NW82 654 aa10.24□□□□□ -0.77
SYN3-204ENST00000441821 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms