RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 LRPAP1P30533 357 aa3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 PTGER1P34995 402 aa3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 PPP1R2P41236 205 aa3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 VIPR2P41587 438 aa3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 STT3AP46977 705 aa3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 PXNP49023 591 aaPredicted RBP3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 COPB1P53618 953 aaKnown RBP3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 TPTEP56180 551 aa3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 PROK1P58294 105 aa3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 FKBP1AP62942 108 aaKnown RBP3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 GABPAQ06546 454 aa3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 FOXD4Q12950 439 aaPredicted RBP3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 BIRC3Q13489 604 aa3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 STIM1Q13586 685 aa3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 SIM2Q14190 667 aaPredicted RBP3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 KCNB1Q14721 858 aa3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 KARSQ15046 597 aaKnown RBP3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 LETM2Q2VYF4 491 aa3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 GLIPR1L2Q4G1C9 344 aa3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 FAM209BQ5JX69 171 aa3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 GPATCH4Q5T3I0 446 aaKnown RBP3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 JAKMIP3Q5VZ66 844 aa3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 ZNF772Q68DY9 489 aaPredicted RBP3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 APOBEC3HQ6NTF7 200 aaKnown RBP3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 CDC42EP5Q6NZY7 148 aa3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 LVRNQ6Q4G3 990 aa3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 APTXQ7Z2E3 356 aaKnown RBP3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 DTX2Q86UW9 622 aa3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 C2CD5Q86YS7 1000 aa3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 FAM109AQ8N4B1 249 aa3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 CERS5Q8N5B7 392 aa3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 SH2D3CQ8N5H7 860 aa3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 TEX19Q8NA77 164 aa3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 RP9Q8TA86 221 aaKnown RBP3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 TBCKQ8TEA7 893 aa3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 NOC3LQ8WTT2 800 aaKnown RBP3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 NELFBQ8WX92 580 aa3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 ANKRD7Q92527 254 aa3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 RFKQ969G6 155 aa3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 ZNF622Q969S3 477 aaKnown RBP eCLIP3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 CCDC51Q96ER9 411 aa3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 CALML4Q96GE6 196 aa3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 ERO1AQ96HE7 468 aa3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 PTDSS2Q9BVG9 487 aa3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 MXD3Q9BW11 206 aa3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 DHX36Q9H2U1 1008 aaKnown RBP3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 CPVLQ9H3G5 476 aa3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 JMJD4Q9H9V9 463 aa3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 AS3MTQ9HBK9 375 aa3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 DDX4Q9NQI0 724 aaKnown RBP3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 MAP3K20Q9NYL2 800 aaKnown RBP3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 ZNF70Q9UC06 446 aaPredicted RBP3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 LIMA1Q9UHB6 759 aaKnown RBP3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 ST3GAL5Q9UNP4 418 aa3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 PLIN4Q96Q06 1357 aa3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 KIAA1551Q9HCM1 1747 aa3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 ARHGEF17Q96PE2 2063 aaPredicted RBP3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 ECM29Q5VYK3 1845 aa3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 TAF1LQ8IZX4 1826 aa3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 PHLPP2Q6ZVD8 1323 aa3.71□□□□□ -1.81
HMGB3P11-201ENST00000440127 SNED1Q8TER0 1413 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 PP2D1A8MPX8 630 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 KCNJ18B7U540 433 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 F8W8V4 182 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 KLRC4O43908 158 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 FGF18O76093 207 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 THP07101 528 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 CELA2AP08217 269 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 NPSP0C0P6 89 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 CHRM3P20309 590 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 EEF1GP26641 437 aaKnown RBP3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 ITPKBP27987 946 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 HOXA7P31268 230 aaPredicted RBP3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 SHMT1P34896 483 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 PBX1P40424 430 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 TECP42680 631 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 PRCPP42785 496 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 CCT5P48643 541 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 ZNF81P51508 661 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 RBM5P52756 815 aaKnown RBP eCLIP3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 MRPL12P52815 198 aaKnown RBP3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 EEFSECP57772 596 aaKnown RBP3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 GOLGA8FQ08AF8 430 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 GOLGA8DPQ0D2H9 430 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 PMS2P11Q13670 270 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 E2F2Q14209 437 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 FGL2Q14314 439 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 KCNJ12Q14500 433 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 PDIA5Q14554 519 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 PLS1Q14651 629 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 KRT31Q15323 416 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 PDCD2Q16342 344 aaPredicted RBP3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 CALCRLQ16602 461 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 CCDC96Q2M329 555 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 TMEM266Q2M3C6 531 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 TBC1D25Q3MII6 688 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 CERKLQ49MI3 558 aaPredicted RBP3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 SLC44A4Q53GD3 710 aa3.71□□□□□ -1.82
HMGB3P11-201ENST00000440127 TMEM63BQ5T3F8 832 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms