RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 TBKBP1A7MCY6 615 aa14.43□□□□□ -0.1
LIMD1-202ENST00000440097 TRIM49D1C9J1S8 452 aa14.43□□□□□ -0.1
LIMD1-202ENST00000440097 TMEM189-UBE2V1I3L0A0 370 aa14.43□□□□□ -0.1
LIMD1-202ENST00000440097 ZBTB24O43167 697 aaPredicted RBP14.43□□□□□ -0.1
LIMD1-202ENST00000440097 UGT1A9O60656 530 aa14.43□□□□□ -0.1
LIMD1-202ENST00000440097 PYGBP11216 843 aa14.43□□□□□ -0.1
LIMD1-202ENST00000440097 PGM1P36871 562 aa14.43□□□□□ -0.1
LIMD1-202ENST00000440097 CPA2P48052 419 aa14.43□□□□□ -0.1
LIMD1-202ENST00000440097 PPIDQ08752 370 aaKnown RBP14.43□□□□□ -0.1
LIMD1-202ENST00000440097 BMPR2Q13873 1038 aa14.43□□□□□ -0.1
LIMD1-202ENST00000440097 TSSK1BQ9BXA7 367 aa14.43□□□□□ -0.1
LIMD1-202ENST00000440097 MMADHCQ9H3L0 296 aaPredicted RBP14.43□□□□□ -0.1
LIMD1-202ENST00000440097 OCEL1Q9H607 264 aa14.43□□□□□ -0.1
LIMD1-202ENST00000440097 UGT1A7Q9HAW7 530 aa14.43□□□□□ -0.1
LIMD1-202ENST00000440097 UGT1A10Q9HAW8 530 aa14.43□□□□□ -0.1
LIMD1-202ENST00000440097 UGT1A8Q9HAW9 530 aa14.43□□□□□ -0.1
LIMD1-202ENST00000440097 KCNK13Q9HB14 408 aa14.43□□□□□ -0.1
LIMD1-202ENST00000440097 TRDMT1O14717 391 aaKnown RBP14.43□□□□□ -0.1
LIMD1-202ENST00000440097 SYN3O14994 580 aa14.43□□□□□ -0.1
LIMD1-202ENST00000440097 JCHAINP01591 159 aa14.43□□□□□ -0.1
LIMD1-202ENST00000440097 TTC39BQ5VTQ0 682 aaPredicted RBP14.43□□□□□ -0.1
LIMD1-202ENST00000440097 IZUMO2Q6UXV1 221 aa14.43□□□□□ -0.1
LIMD1-202ENST00000440097 MIB1Q86YT6 1006 aa14.43□□□□□ -0.1
LIMD1-202ENST00000440097 UNC5BQ8IZJ1 945 aa14.43□□□□□ -0.1
LIMD1-202ENST00000440097 MZB1Q8WU39 189 aa14.43□□□□□ -0.1
LIMD1-202ENST00000440097 FAM161BQ96MY7 647 aa14.43□□□□□ -0.1
LIMD1-202ENST00000440097 NDNQ99608 321 aa14.43□□□□□ -0.1
LIMD1-202ENST00000440097 APOL2Q9BQE5 337 aa14.43□□□□□ -0.1
LIMD1-202ENST00000440097 RNF208Q9H0X6 261 aa14.43□□□□□ -0.1
LIMD1-202ENST00000440097 SMOC2Q9H3U7 446 aa14.43□□□□□ -0.1
LIMD1-202ENST00000440097 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.43□□□□□ -0.1
LIMD1-202ENST00000440097 TET1Q8NFU7 2136 aa14.43□□□□□ -0.1
LIMD1-202ENST00000440097 ARHGAP42A6NI28 874 aa14.42□□□□□ -0.1
LIMD1-202ENST00000440097 DNAJC6O75061 913 aa14.42□□□□□ -0.1
LIMD1-202ENST00000440097 MAGEA3P43357 314 aa14.42□□□□□ -0.1
LIMD1-202ENST00000440097 SLC11A1P49279 550 aa14.42□□□□□ -0.1
LIMD1-202ENST00000440097 EFEMP1Q12805 493 aa14.42□□□□□ -0.1
LIMD1-202ENST00000440097 CES3Q6UWW8 571 aa14.42□□□□□ -0.1
LIMD1-202ENST00000440097 OR52K1Q8NGK4 314 aa14.42□□□□□ -0.1
LIMD1-202ENST00000440097 FUBP3Q96I24 572 aaKnown RBP eCLIP14.42□□□□□ -0.1
LIMD1-202ENST00000440097 SERAC1Q96JX3 654 aa14.42□□□□□ -0.1
LIMD1-202ENST00000440097 SPATA16Q9BXB7 569 aa14.42□□□□□ -0.1
LIMD1-202ENST00000440097 FBXO44Q9H4M3 255 aa14.42□□□□□ -0.1
LIMD1-202ENST00000440097 SSU72Q9NP77 194 aaKnown RBP14.42□□□□□ -0.1
LIMD1-202ENST00000440097 GMIPQ9P107 970 aa14.42□□□□□ -0.1
LIMD1-202ENST00000440097 ARMCX1Q9P291 453 aa14.42□□□□□ -0.1
LIMD1-202ENST00000440097 ANGPTL2Q9UKU9 493 aa14.42□□□□□ -0.1
LIMD1-202ENST00000440097 PCDHA11Q9Y5I1 949 aa14.42□□□□□ -0.1
LIMD1-202ENST00000440097 SHROOM3Q8TF72 1996 aa14.42□□□□□ -0.1
LIMD1-202ENST00000440097 MTSS1O43312 755 aa14.42□□□□□ -0.1
LIMD1-202ENST00000440097 C1QAP02745 245 aa14.42□□□□□ -0.1
LIMD1-202ENST00000440097 SNRPAP09012 282 aaKnown RBP14.42□□□□□ -0.1
LIMD1-202ENST00000440097 ZNF135P52742 658 aaPredicted RBP14.42□□□□□ -0.1
LIMD1-202ENST00000440097 USP46P62068 366 aa14.42□□□□□ -0.1
LIMD1-202ENST00000440097 ZBTB17Q13105 803 aa14.42□□□□□ -0.1
LIMD1-202ENST00000440097 BRMS1LQ5PSV4 323 aa14.42□□□□□ -0.1
LIMD1-202ENST00000440097 MROH9Q5TGP6 573 aa14.42□□□□□ -0.1
LIMD1-202ENST00000440097 LRRC8BQ6P9F7 803 aa14.42□□□□□ -0.1
LIMD1-202ENST00000440097 MON1AQ86VX9 555 aa14.42□□□□□ -0.1
LIMD1-202ENST00000440097 SCML4Q8N228 414 aa14.42□□□□□ -0.1
LIMD1-202ENST00000440097 ARHGAP18Q8N392 663 aa14.42□□□□□ -0.1
LIMD1-202ENST00000440097 ATPAF2Q8N5M1 289 aa14.42□□□□□ -0.1
LIMD1-202ENST00000440097 FBXO32Q969P5 355 aa14.42□□□□□ -0.1
LIMD1-202ENST00000440097 ALKBH8Q96BT7 664 aaKnown RBP14.42□□□□□ -0.1
LIMD1-202ENST00000440097 HDAC11Q96DB2 347 aa14.42□□□□□ -0.1
LIMD1-202ENST00000440097 SERPINB11Q96P15 392 aa14.42□□□□□ -0.1
LIMD1-202ENST00000440097 SLC13A1Q9BZW2 595 aa14.42□□□□□ -0.1
LIMD1-202ENST00000440097 SMYD2Q9NRG4 433 aa14.42□□□□□ -0.1
LIMD1-202ENST00000440097 OSER1Q9NX31 292 aa14.42□□□□□ -0.1
LIMD1-202ENST00000440097 IL1RAPL1Q9NZN1 696 aa14.42□□□□□ -0.1
LIMD1-202ENST00000440097 MPP6Q9NZW5 540 aa14.42□□□□□ -0.1
LIMD1-202ENST00000440097 MTO1Q9Y2Z2 717 aaKnown RBP14.42□□□□□ -0.1
LIMD1-202ENST00000440097 RAD54BQ9Y620 910 aa14.42□□□□□ -0.1
LIMD1-202ENST00000440097 SZT2Q5T011 3432 aa14.41□□□□□ -0.1
LIMD1-202ENST00000440097 KRT38O76015 456 aa14.41□□□□□ -0.1
LIMD1-202ENST00000440097 CSH1P0DML2 217 aa14.41□□□□□ -0.1
LIMD1-202ENST00000440097 CSH2P0DML3 217 aa14.41□□□□□ -0.1
LIMD1-202ENST00000440097 CYP2C18P33260 490 aa14.41□□□□□ -0.1
LIMD1-202ENST00000440097 CDK7P50613 346 aa14.41□□□□□ -0.1
LIMD1-202ENST00000440097 GALNT2Q10471 571 aa14.41□□□□□ -0.1
LIMD1-202ENST00000440097 KRT72Q14CN4 511 aa14.41□□□□□ -0.1
LIMD1-202ENST00000440097 FUT10Q6P4F1 479 aa14.41□□□□□ -0.1
LIMD1-202ENST00000440097 DTNBP1Q96EV8 351 aa14.41□□□□□ -0.1
LIMD1-202ENST00000440097 FAM210AQ96ND0 272 aa14.41□□□□□ -0.1
LIMD1-202ENST00000440097 CASD1Q96PB1 797 aa14.41□□□□□ -0.1
LIMD1-202ENST00000440097 OSBPL2Q9H1P3 480 aa14.41□□□□□ -0.1
LIMD1-202ENST00000440097 HIPK3Q9H422 1215 aa14.41□□□□□ -0.1
LIMD1-202ENST00000440097 CATSPERBQ9H7T0 1116 aa14.41□□□□□ -0.1
LIMD1-202ENST00000440097 SYBUQ9NX95 663 aa14.41□□□□□ -0.1
LIMD1-202ENST00000440097 FCHO1O14526 889 aa14.41□□□□□ -0.1
LIMD1-202ENST00000440097 TBX18O95935 607 aa14.41□□□□□ -0.1
LIMD1-202ENST00000440097 HMBSP08397 361 aa14.41□□□□□ -0.1
LIMD1-202ENST00000440097 COL6A1P12109 1028 aa14.41□□□□□ -0.1
LIMD1-202ENST00000440097 MLNP12872 115 aa14.41□□□□□ -0.1
LIMD1-202ENST00000440097 ANPEPP15144 967 aa14.41□□□□□ -0.1
LIMD1-202ENST00000440097 NFKB1P19838 968 aa14.41□□□□□ -0.1
LIMD1-202ENST00000440097 PRKCHP24723 683 aa14.41□□□□□ -0.1
LIMD1-202ENST00000440097 PRMT2P55345 433 aa14.41□□□□□ -0.1
LIMD1-202ENST00000440097 DSG1Q02413 1049 aa14.41□□□□□ -0.1
LIMD1-202ENST00000440097 GPNMBQ14956 572 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms