RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 GFPT1Q06210 699 aaPredicted RBP24.17■■□□□ 1.46
VARS-217ENST00000440048 SFSWAPQ12872 951 aaKnown RBP24.17■■□□□ 1.46
VARS-217ENST00000440048 CA9Q16790 459 aa24.17■■□□□ 1.46
VARS-217ENST00000440048 DUOXA1Q1HG43 343 aa24.17■■□□□ 1.46
VARS-217ENST00000440048 WDR45BQ5MNZ6 344 aa24.17■■□□□ 1.46
VARS-217ENST00000440048 ERMARDQ5T6L9 678 aa24.17■■□□□ 1.46
VARS-217ENST00000440048 DCAF12L1Q5VU92 463 aa24.17■■□□□ 1.46
VARS-217ENST00000440048 RETSATQ6NUM9 610 aa24.17■■□□□ 1.46
VARS-217ENST00000440048 CYP4V2Q6ZWL3 525 aaPredicted RBP24.17■■□□□ 1.46
VARS-217ENST00000440048 DNASE2BQ8WZ79 361 aa24.17■■□□□ 1.46
VARS-217ENST00000440048 ARHGEF26Q96DR7 871 aa24.17■■□□□ 1.46
VARS-217ENST00000440048 SNRNP25Q9BV90 132 aaKnown RBP24.17■■□□□ 1.46
VARS-217ENST00000440048 EDEM2Q9BV94 578 aa24.17■■□□□ 1.46
VARS-217ENST00000440048 PCED1AQ9H1Q7 454 aa24.17■■□□□ 1.46
VARS-217ENST00000440048 MAGEH1Q9H213 219 aa24.17■■□□□ 1.46
VARS-217ENST00000440048 C6orf106Q9H6K1 298 aaPredicted RBP24.17■■□□□ 1.46
VARS-217ENST00000440048 SGK2Q9HBY8 427 aa24.17■■□□□ 1.46
VARS-217ENST00000440048 ZNHIT6Q9NWK9 470 aaKnown RBP24.17■■□□□ 1.46
VARS-217ENST00000440048 ADAMTS9Q9P2N4 1935 aa24.16■■□□□ 1.46
VARS-217ENST00000440048 CACNA1EQ15878 2313 aa24.16■■□□□ 1.46
VARS-217ENST00000440048 MCF2LO15068 1137 aa24.16■■□□□ 1.46
VARS-217ENST00000440048 BNIP3LO60238 219 aa24.16■■□□□ 1.46
VARS-217ENST00000440048 PRPSAP2O60256 369 aa24.16■■□□□ 1.46
VARS-217ENST00000440048 RAMP2O60895 175 aa24.16■■□□□ 1.46
VARS-217ENST00000440048 MFAP3LO75121 409 aa24.16■■□□□ 1.46
VARS-217ENST00000440048 C5AR1P21730 350 aa24.16■■□□□ 1.46
VARS-217ENST00000440048 GALCP54803 685 aa24.16■■□□□ 1.46
VARS-217ENST00000440048 ADKP55263 362 aaKnown RBP24.16■■□□□ 1.46
VARS-217ENST00000440048 SLC20A2Q08357 652 aa24.16■■□□□ 1.46
VARS-217ENST00000440048 MAPK8IP2Q13387 824 aaPredicted RBP24.16■■□□□ 1.46
VARS-217ENST00000440048 TSR1Q2NL82 804 aaKnown RBP24.16■■□□□ 1.46
VARS-217ENST00000440048 SLC23A3Q6PIS1 610 aa24.16■■□□□ 1.46
VARS-217ENST00000440048 DSG4Q86SJ6 1040 aa24.16■■□□□ 1.46
VARS-217ENST00000440048 AADATQ8N5Z0 425 aa24.16■■□□□ 1.46
VARS-217ENST00000440048 CEP76Q8TAP6 659 aa24.16■■□□□ 1.46
VARS-217ENST00000440048 OMDQ99983 421 aa24.16■■□□□ 1.46
VARS-217ENST00000440048 NCAPGQ9BPX3 1015 aa24.16■■□□□ 1.46
VARS-217ENST00000440048 NUP85Q9BW27 656 aa24.16■■□□□ 1.46
VARS-217ENST00000440048 TRIM5Q9C035 493 aa24.16■■□□□ 1.46
VARS-217ENST00000440048 NEUROG2Q9H2A3 272 aa24.16■■□□□ 1.46
VARS-217ENST00000440048 DHX35Q9H5Z1 703 aaKnown RBP24.16■■□□□ 1.46
VARS-217ENST00000440048 NOL6Q9H6R4 1146 aaKnown RBP24.16■■□□□ 1.46
VARS-217ENST00000440048 CATSPERBQ9H7T0 1116 aa24.16■■□□□ 1.46
VARS-217ENST00000440048 ABHD10Q9NUJ1 306 aa24.16■■□□□ 1.46
VARS-217ENST00000440048 SARDHQ9UL12 918 aa24.16■■□□□ 1.46
VARS-217ENST00000440048 WASH4PA8MWX3 477 aa24.15■■□□□ 1.46
VARS-217ENST00000440048 ALOX15BO15296 676 aa24.15■■□□□ 1.46
VARS-217ENST00000440048 RNASEH2AO75792 299 aaKnown RBP24.15■■□□□ 1.46
VARS-217ENST00000440048 CFIP05156 583 aa24.15■■□□□ 1.46
VARS-217ENST00000440048 HTR7P34969 479 aa24.15■■□□□ 1.46
VARS-217ENST00000440048 SERPINH1P50454 418 aaKnown RBP24.15■■□□□ 1.46
VARS-217ENST00000440048 TPI1P60174 286 aa24.15■■□□□ 1.46
VARS-217ENST00000440048 TBX2Q13207 712 aaPredicted RBP24.15■■□□□ 1.46
VARS-217ENST00000440048 ACAP1Q15027 740 aa24.15■■□□□ 1.46
VARS-217ENST00000440048 POLD3Q15054 466 aaPredicted RBP24.15■■□□□ 1.46
VARS-217ENST00000440048 SLC18A3Q16572 532 aa24.15■■□□□ 1.46
VARS-217ENST00000440048 ASTE1Q2TB18 679 aaPredicted RBP24.15■■□□□ 1.46
VARS-217ENST00000440048 STPG1Q5TH74 334 aa24.15■■□□□ 1.46
VARS-217ENST00000440048 DAB2IPQ5VWQ8 1189 aa24.15■■□□□ 1.46
VARS-217ENST00000440048 C22orf39Q6P5X5 142 aa24.15■■□□□ 1.46
VARS-217ENST00000440048 RABEPKQ7Z6M1 372 aa24.15■■□□□ 1.46
VARS-217ENST00000440048 HDDC3Q8N4P3 179 aa24.15■■□□□ 1.46
VARS-217ENST00000440048 OR2A12Q8NGT7 310 aa24.15■■□□□ 1.46
VARS-217ENST00000440048 NUSAP1Q9BXS6 441 aaKnown RBP24.15■■□□□ 1.46
VARS-217ENST00000440048 RBSNQ9H1K0 784 aa24.15■■□□□ 1.46
VARS-217ENST00000440048 PPM1HQ9ULR3 514 aa24.15■■□□□ 1.46
VARS-217ENST00000440048 FZD4Q9ULV1 537 aa24.15■■□□□ 1.46
VARS-217ENST00000440048 SLC6A14Q9UN76 642 aa24.15■■□□□ 1.46
VARS-217ENST00000440048 ACTL7AQ9Y615 435 aa24.15■■□□□ 1.46
VARS-217ENST00000440048 SSU72P8A0A1W2PR75 194 aa24.14■■□□□ 1.45
VARS-217ENST00000440048 EIF3CLB5ME19 914 aaKnown RBP24.14■■□□□ 1.45
VARS-217ENST00000440048 FGF10O15520 208 aaPredicted RBP24.14■■□□□ 1.45
VARS-217ENST00000440048 CD160O95971 181 aa24.14■■□□□ 1.45
VARS-217ENST00000440048 SERPINF2P08697 491 aa24.14■■□□□ 1.45
VARS-217ENST00000440048 GOT1P17174 413 aa24.14■■□□□ 1.45
VARS-217ENST00000440048 PCK1P35558 622 aa24.14■■□□□ 1.45
VARS-217ENST00000440048 METAP1P53582 386 aa24.14■■□□□ 1.45
VARS-217ENST00000440048 PIP4K2CQ8TBX8 421 aa24.14■■□□□ 1.45
VARS-217ENST00000440048 BTBD6Q96KE9 485 aa24.14■■□□□ 1.45
VARS-217ENST00000440048 CCDC114Q96M63 670 aa24.14■■□□□ 1.45
VARS-217ENST00000440048 KCTD15Q96SI1 283 aaPredicted RBP24.14■■□□□ 1.45
VARS-217ENST00000440048 EIF3CQ99613 913 aaKnown RBP24.14■■□□□ 1.45
VARS-217ENST00000440048 CHP1Q99653 195 aa24.14■■□□□ 1.45
VARS-217ENST00000440048 TNKS2Q9H2K2 1166 aa24.14■■□□□ 1.45
VARS-217ENST00000440048 DEF6Q9H4E7 631 aa24.14■■□□□ 1.45
VARS-217ENST00000440048 ANAPC7Q9UJX3 599 aa24.14■■□□□ 1.45
VARS-217ENST00000440048 FARP1Q9Y4F1 1045 aaPredicted RBP24.14■■□□□ 1.45
VARS-217ENST00000440048 EEF2KO00418 725 aaKnown RBP24.13■■□□□ 1.45
VARS-217ENST00000440048 ZNF821O75541 412 aaPredicted RBP24.13■■□□□ 1.45
VARS-217ENST00000440048 DRD3P35462 400 aa24.13■■□□□ 1.45
VARS-217ENST00000440048 PIGHQ14442 188 aaPredicted RBP24.13■■□□□ 1.45
VARS-217ENST00000440048 FAM46CQ5VWP2 391 aa24.13■■□□□ 1.45
VARS-217ENST00000440048 PSTKQ8IV42 348 aaKnown RBP24.13■■□□□ 1.45
VARS-217ENST00000440048 CEP44Q9C0F1 390 aa24.13■■□□□ 1.45
VARS-217ENST00000440048 MIR1-1HGQ9H1L0 117 aa24.13■■□□□ 1.45
VARS-217ENST00000440048 CAPN10Q9HC96 672 aa24.13■■□□□ 1.45
VARS-217ENST00000440048 FSCN3Q9NQT6 498 aa24.13■■□□□ 1.45
VARS-217ENST00000440048 SUSD2Q9UGT4 822 aa24.13■■□□□ 1.45
VARS-217ENST00000440048 IP6K2Q9UHH9 426 aa24.13■■□□□ 1.45
VARS-217ENST00000440048 EIF2B4Q9UI10 523 aaKnown RBP24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms