RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 ACOT9Q9Y305 439 aa9.2□□□□□ -0.94
COPB1-202ENST00000439561 COMMD10Q9Y6G5 202 aa9.2□□□□□ -0.94
COPB1-202ENST00000439561 STYXL1Q9Y6J8 313 aa9.2□□□□□ -0.94
COPB1-202ENST00000439561 A0A087WXM4 84 aa9.2□□□□□ -0.94
COPB1-202ENST00000439561 E7ENX8 843 aa9.2□□□□□ -0.94
COPB1-202ENST00000439561 CLOCKO15516 846 aa9.2□□□□□ -0.94
COPB1-202ENST00000439561 PLA2G6O60733 806 aa9.2□□□□□ -0.94
COPB1-202ENST00000439561 GCATO75600 419 aa9.2□□□□□ -0.94
COPB1-202ENST00000439561 FBXO21O94952 628 aa9.2□□□□□ -0.94
COPB1-202ENST00000439561 SLC4A1P02730 911 aa9.2□□□□□ -0.94
COPB1-202ENST00000439561 UGT1A6P19224 532 aa9.2□□□□□ -0.94
COPB1-202ENST00000439561 LRPAP1P30533 357 aa9.2□□□□□ -0.94
COPB1-202ENST00000439561 CDH5P33151 784 aaPredicted RBP9.2□□□□□ -0.94
COPB1-202ENST00000439561 YAP1P46937 504 aaKnown RBP9.2□□□□□ -0.94
COPB1-202ENST00000439561 EIF2B2P49770 351 aaKnown RBP9.2□□□□□ -0.94
COPB1-202ENST00000439561 CSE1LP55060 971 aaKnown RBP9.2□□□□□ -0.94
COPB1-202ENST00000439561 SFSWAPQ12872 951 aaKnown RBP9.2□□□□□ -0.94
COPB1-202ENST00000439561 GRM3Q14832 879 aa9.2□□□□□ -0.94
COPB1-202ENST00000439561 UTS2BQ765I0 119 aa9.2□□□□□ -0.94
COPB1-202ENST00000439561 PDZD4Q76G19 769 aaPredicted RBP9.2□□□□□ -0.94
COPB1-202ENST00000439561 SIX6OS1Q8N1H7 587 aa9.2□□□□□ -0.94
COPB1-202ENST00000439561 CBR4Q8N4T8 237 aa9.2□□□□□ -0.94
COPB1-202ENST00000439561 CELF6Q96J87 481 aaKnown RBP9.2□□□□□ -0.94
COPB1-202ENST00000439561 VPS50Q96JG6 964 aa9.2□□□□□ -0.94
COPB1-202ENST00000439561 OSBPL11Q9BXB4 747 aa9.2□□□□□ -0.94
COPB1-202ENST00000439561 SIK2Q9H0K1 926 aa9.2□□□□□ -0.94
COPB1-202ENST00000439561 AS3MTQ9HBK9 375 aa9.2□□□□□ -0.94
COPB1-202ENST00000439561 TRNAU1APQ9NX07 287 aaKnown RBP9.2□□□□□ -0.94
COPB1-202ENST00000439561 MAP3K20Q9NYL2 800 aaKnown RBP9.2□□□□□ -0.94
COPB1-202ENST00000439561 MOCS1Q9NZB8 636 aa9.2□□□□□ -0.94
COPB1-202ENST00000439561 MORF4L1Q9UBU8 362 aa9.2□□□□□ -0.94
COPB1-202ENST00000439561 A0A087WZ62 844 aa9.2□□□□□ -0.94
COPB1-202ENST00000439561 WNT10BO00744 389 aa9.2□□□□□ -0.94
COPB1-202ENST00000439561 HCRTO43612 131 aa9.2□□□□□ -0.94
COPB1-202ENST00000439561 IL18RAPO95256 599 aa9.2□□□□□ -0.94
COPB1-202ENST00000439561 JCHAINP01591 159 aa9.2□□□□□ -0.94
COPB1-202ENST00000439561 VTNP04004 478 aa9.2□□□□□ -0.94
COPB1-202ENST00000439561 JUNP05412 331 aaKnown RBP9.2□□□□□ -0.94
COPB1-202ENST00000439561 ARSAP15289 507 aa9.2□□□□□ -0.94
COPB1-202ENST00000439561 TPI1P60174 286 aa9.2□□□□□ -0.94
COPB1-202ENST00000439561 PLIN5Q00G26 463 aa9.2□□□□□ -0.94
COPB1-202ENST00000439561 IL1RL1Q01638 556 aa9.2□□□□□ -0.94
COPB1-202ENST00000439561 FAM83EQ2M2I3 478 aa9.2□□□□□ -0.94
COPB1-202ENST00000439561 SPANXN3Q5MJ09 141 aa9.2□□□□□ -0.94
COPB1-202ENST00000439561 LIPMQ5VYY2 423 aa9.2□□□□□ -0.94
COPB1-202ENST00000439561 METTL21CQ5VZV1 264 aa9.2□□□□□ -0.94
COPB1-202ENST00000439561 ERI1Q8IV48 349 aaKnown RBP9.2□□□□□ -0.94
COPB1-202ENST00000439561 RBBP8Q99708 897 aa9.2□□□□□ -0.94
COPB1-202ENST00000439561 FDXACB1Q9BRP7 624 aaPredicted RBP9.2□□□□□ -0.94
COPB1-202ENST00000439561 MTG1Q9BT17 334 aaPredicted RBP9.2□□□□□ -0.94
COPB1-202ENST00000439561 OSBPL6Q9BZF3 934 aa9.2□□□□□ -0.94
COPB1-202ENST00000439561 SENP6Q9GZR1 1112 aaPredicted RBP9.2□□□□□ -0.94
COPB1-202ENST00000439561 FAM49AQ9H0Q0 323 aaPredicted RBP9.2□□□□□ -0.94
COPB1-202ENST00000439561 POMKQ9H5K3 350 aa9.2□□□□□ -0.94
COPB1-202ENST00000439561 MRPL40Q9NQ50 206 aaKnown RBP9.2□□□□□ -0.94
COPB1-202ENST00000439561 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.2□□□□□ -0.941e-13■■□□□ 14.1
COPB1-202ENST00000439561 SIX4Q9UIU6 781 aa9.2□□□□□ -0.94
COPB1-202ENST00000439561 CDC14AQ9UNH5 594 aa9.2□□□□□ -0.94
COPB1-202ENST00000439561 COPG1Q9Y678 874 aaKnown RBP9.2□□□□□ -0.94
COPB1-202ENST00000439561 A0A1W2PPW3 197 aa9.19□□□□□ -0.94
COPB1-202ENST00000439561 SPATA31C2B4DYI2 1134 aa9.19□□□□□ -0.94
COPB1-202ENST00000439561 GPR25O00155 361 aa9.19□□□□□ -0.94
COPB1-202ENST00000439561 KDM1AO60341 852 aa9.19□□□□□ -0.94
COPB1-202ENST00000439561 SUPT7LO94864 414 aa9.19□□□□□ -0.94
COPB1-202ENST00000439561 ZBTB11O95625 1053 aaPredicted RBP9.19□□□□□ -0.94
COPB1-202ENST00000439561 MPOP05164 745 aa9.19□□□□□ -0.94
COPB1-202ENST00000439561 IL4RP24394 825 aa9.19□□□□□ -0.94
COPB1-202ENST00000439561 HARS2P49590 506 aaKnown RBP9.19□□□□□ -0.94
COPB1-202ENST00000439561 NDST2P52849 883 aa9.19□□□□□ -0.94
COPB1-202ENST00000439561 CDK18Q07002 472 aa9.19□□□□□ -0.94
COPB1-202ENST00000439561 BNIP3Q12983 259 aa9.19□□□□□ -0.94
COPB1-202ENST00000439561 TMEM132BQ14DG7 1078 aa9.19□□□□□ -0.94
COPB1-202ENST00000439561 MAPRE2Q15555 327 aa9.19□□□□□ -0.94
COPB1-202ENST00000439561 ZNF423Q2M1K9 1284 aa9.19□□□□□ -0.94
COPB1-202ENST00000439561 TRIM16LQ309B1 348 aa9.19□□□□□ -0.94
COPB1-202ENST00000439561 ZIK1Q3SY52 487 aaPredicted RBP9.19□□□□□ -0.94
COPB1-202ENST00000439561 ANKDD1AQ495B1 522 aa9.19□□□□□ -0.94
COPB1-202ENST00000439561 OGFOD2Q6N063 350 aa9.19□□□□□ -0.94
COPB1-202ENST00000439561 ZNF534Q76KX8 674 aa9.19□□□□□ -0.94
COPB1-202ENST00000439561 TP53INP2Q8IXH6 220 aa9.19□□□□□ -0.94
COPB1-202ENST00000439561 DEFB106AQ8N104 65 aa9.19□□□□□ -0.94
COPB1-202ENST00000439561 SLC7A14Q8TBB6 771 aa9.19□□□□□ -0.94
COPB1-202ENST00000439561 MAGEE2Q8TD90 523 aaPredicted RBP9.19□□□□□ -0.94
COPB1-202ENST00000439561 GJD4Q96KN9 370 aaPredicted RBP9.19□□□□□ -0.94
COPB1-202ENST00000439561 SEPHS2Q99611 448 aa9.19□□□□□ -0.94
COPB1-202ENST00000439561 ZNF696Q9H7X3 374 aa9.19□□□□□ -0.94
COPB1-202ENST00000439561 PLAC1Q9HBJ0 212 aa9.19□□□□□ -0.94
COPB1-202ENST00000439561 PDLIM7Q9NR12 457 aa9.19□□□□□ -0.94
COPB1-202ENST00000439561 MKS1Q9NXB0 559 aa9.19□□□□□ -0.94
COPB1-202ENST00000439561 NCKIPSDQ9NZQ3 722 aa9.19□□□□□ -0.94
COPB1-202ENST00000439561 CROTQ9UKG9 612 aa9.19□□□□□ -0.94
COPB1-202ENST00000439561 RBMX2Q9Y388 322 aaKnown RBP9.19□□□□□ -0.94
COPB1-202ENST00000439561 TRPC5OSA6NMA1 111 aa9.19□□□□□ -0.94
COPB1-202ENST00000439561 DFFAO00273 331 aa9.19□□□□□ -0.94
COPB1-202ENST00000439561 ACKR2O00590 384 aa9.19□□□□□ -0.94
COPB1-202ENST00000439561 ANGPT2O15123 496 aa9.19□□□□□ -0.94
COPB1-202ENST00000439561 INPP4BO15327 924 aa9.19□□□□□ -0.94
COPB1-202ENST00000439561 STBD1O95210 358 aa9.19□□□□□ -0.94
COPB1-202ENST00000439561 STMN1P16949 149 aa9.19□□□□□ -0.94
COPB1-202ENST00000439561 ZNF23P17027 643 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms