RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 LRRC8DQ7L1W4 858 aa3.82□□□□□ -1.8
VPS41-207ENST00000439468 RSRC2Q7L4I2 434 aaKnown RBP3.82□□□□□ -1.8
VPS41-207ENST00000439468 TBC1D1Q86TI0 1168 aaPredicted RBP3.82□□□□□ -1.8
VPS41-207ENST00000439468 CHD1LQ86WJ1 897 aa3.82□□□□□ -1.8
VPS41-207ENST00000439468 PCYOX1LQ8NBM8 494 aa3.82□□□□□ -1.8
VPS41-207ENST00000439468 ADPRHL1Q8NDY3 354 aa3.82□□□□□ -1.8
VPS41-207ENST00000439468 PPHLN1Q8NEY8 458 aaKnown RBP3.82□□□□□ -1.8
VPS41-207ENST00000439468 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.82□□□□□ -1.8
VPS41-207ENST00000439468 SKA1Q96BD8 255 aa3.82□□□□□ -1.8
VPS41-207ENST00000439468 MOV10Q9HCE1 1003 aaKnown RBP3.82□□□□□ -1.8
VPS41-207ENST00000439468 ZNF304Q9HCX3 659 aa3.82□□□□□ -1.8
VPS41-207ENST00000439468 NLKQ9UBE8 527 aa3.82□□□□□ -1.8
VPS41-207ENST00000439468 UPB1Q9UBR1 384 aa3.82□□□□□ -1.8
VPS41-207ENST00000439468 TBX20Q9UMR3 447 aa3.82□□□□□ -1.8
VPS41-207ENST00000439468 CAMK2AQ9UQM7 478 aa3.82□□□□□ -1.8
VPS41-207ENST00000439468 DTX4Q9Y2E6 619 aa3.82□□□□□ -1.8
VPS41-207ENST00000439468 CYP46A1Q9Y6A2 500 aa3.82□□□□□ -1.8
VPS41-207ENST00000439468 ZMYM2Q9UBW7 1377 aa3.81□□□□□ -1.8
VPS41-207ENST00000439468 B4E171 279 aa3.81□□□□□ -1.8
VPS41-207ENST00000439468 H3BNX3 289 aa3.81□□□□□ -1.8
VPS41-207ENST00000439468 IFNL4K9M1U5 179 aa3.81□□□□□ -1.8
VPS41-207ENST00000439468 TNPO2O14787 897 aaKnown RBP3.81□□□□□ -1.8
VPS41-207ENST00000439468 PER2O15055 1255 aa3.81□□□□□ -1.8
VPS41-207ENST00000439468 CBX6O95503 412 aa3.81□□□□□ -1.8
VPS41-207ENST00000439468 METTL18O95568 372 aa3.81□□□□□ -1.8
VPS41-207ENST00000439468 URODP06132 367 aa3.81□□□□□ -1.8
VPS41-207ENST00000439468 CD63P08962 238 aa3.81□□□□□ -1.8
VPS41-207ENST00000439468 FCGR2AP12318 317 aa3.81□□□□□ -1.8
VPS41-207ENST00000439468 RPS6KB1P23443 525 aa3.81□□□□□ -1.8
VPS41-207ENST00000439468 KRT9P35527 623 aa3.81□□□□□ -1.8
VPS41-207ENST00000439468 PSMC2P35998 433 aaKnown RBP3.81□□□□□ -1.8
VPS41-207ENST00000439468 TSPAN7P41732 249 aa3.81□□□□□ -1.8
VPS41-207ENST00000439468 CDH15P55291 814 aa3.81□□□□□ -1.8
VPS41-207ENST00000439468 GPR68Q15743 365 aa3.81□□□□□ -1.8
VPS41-207ENST00000439468 EARS2Q5JPH6 523 aaKnown RBP3.81□□□□□ -1.8
VPS41-207ENST00000439468 KIAA1755Q5JYT7 1200 aa3.81□□□□□ -1.8
VPS41-207ENST00000439468 ADGRG6Q86SQ4 1221 aa3.81□□□□□ -1.8
VPS41-207ENST00000439468 MON1AQ86VX9 555 aa3.81□□□□□ -1.8
VPS41-207ENST00000439468 UEVLDQ8IX04 471 aa3.81□□□□□ -1.8
VPS41-207ENST00000439468 ADGRF4Q8IZF3 695 aa3.81□□□□□ -1.8
VPS41-207ENST00000439468 PAQR4Q8N4S7 273 aaPredicted RBP3.81□□□□□ -1.8
VPS41-207ENST00000439468 C9orf106Q8NAJ2 232 aa3.81□□□□□ -1.8
VPS41-207ENST00000439468 SETD9Q8NE22 299 aa3.81□□□□□ -1.8
VPS41-207ENST00000439468 OR52N4Q8NGI2 321 aa3.81□□□□□ -1.8
VPS41-207ENST00000439468 UCMAQ8WVF2 138 aa3.81□□□□□ -1.8
VPS41-207ENST00000439468 COQ8BQ96D53 544 aa3.81□□□□□ -1.8
VPS41-207ENST00000439468 EYA3Q99504 573 aa3.81□□□□□ -1.8
VPS41-207ENST00000439468 FUZQ9BT04 418 aa3.81□□□□□ -1.8
VPS41-207ENST00000439468 SLC25A18Q9H1K4 315 aa3.81□□□□□ -1.8
VPS41-207ENST00000439468 PCDHB16Q9NRJ7 776 aa3.81□□□□□ -1.8
VPS41-207ENST00000439468 IRAK4Q9NWZ3 460 aa3.81□□□□□ -1.8
VPS41-207ENST00000439468 ZDHHC7Q9NXF8 308 aa3.81□□□□□ -1.8
VPS41-207ENST00000439468 ALKBH4Q9NXW9 302 aa3.81□□□□□ -1.8
VPS41-207ENST00000439468 CNOT7Q9UIV1 285 aaKnown RBP3.81□□□□□ -1.8
VPS41-207ENST00000439468 SQORQ9Y6N5 450 aa3.81□□□□□ -1.8
VPS41-207ENST00000439468 KCNJ18B7U540 433 aa3.8□□□□□ -1.8
VPS41-207ENST00000439468 PROB1E7EW31 1015 aa3.8□□□□□ -1.8
VPS41-207ENST00000439468 UGDHO60701 494 aa3.8□□□□□ -1.8
VPS41-207ENST00000439468 TULP3O75386 442 aa3.8□□□□□ -1.8
VPS41-207ENST00000439468 NFATC1O95644 943 aa3.8□□□□□ -1.8
VPS41-207ENST00000439468 WNT1P04628 370 aa3.8□□□□□ -1.8
VPS41-207ENST00000439468 SNHG28P0DPA3 235 aa3.8□□□□□ -1.8
VPS41-207ENST00000439468 KLRC2P26717 231 aa3.8□□□□□ -1.8
VPS41-207ENST00000439468 HSF1Q00613 529 aa3.8□□□□□ -1.8
VPS41-207ENST00000439468 CFHR1Q03591 330 aa3.8□□□□□ -1.8
VPS41-207ENST00000439468 SLC18A3Q16572 532 aa3.8□□□□□ -1.8
VPS41-207ENST00000439468 BAK1Q16611 211 aa3.8□□□□□ -1.8
VPS41-207ENST00000439468 TSTQ16762 297 aaKnown RBP3.8□□□□□ -1.8
VPS41-207ENST00000439468 GLE1Q53GS7 698 aaKnown RBP3.8□□□□□ -1.8
VPS41-207ENST00000439468 ZNF667Q5HYK9 610 aa3.8□□□□□ -1.8
VPS41-207ENST00000439468 C10orf76Q5T2E6 689 aa3.8□□□□□ -1.8
VPS41-207ENST00000439468 C1orf122Q6ZSJ8 110 aa3.8□□□□□ -1.8
VPS41-207ENST00000439468 BHLHA9Q7RTU4 235 aa3.8□□□□□ -1.8
VPS41-207ENST00000439468 R3HCC1LQ7Z5L2 792 aaKnown RBP3.8□□□□□ -1.8
VPS41-207ENST00000439468 IRF2BP2Q7Z5L9 587 aa3.8□□□□□ -1.8
VPS41-207ENST00000439468 GALNT7Q86SF2 657 aa3.8□□□□□ -1.8
VPS41-207ENST00000439468 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.8□□□□□ -1.8
VPS41-207ENST00000439468 PLD5Q8N7P1 536 aa3.8□□□□□ -1.8
VPS41-207ENST00000439468 TSPYL6Q8N831 410 aa3.8□□□□□ -1.8
VPS41-207ENST00000439468 SCAIQ8N9R8 606 aa3.8□□□□□ -1.8
VPS41-207ENST00000439468 WACQ9BTA9 647 aa3.8□□□□□ -1.8
VPS41-207ENST00000439468 HEMGNQ9BXL5 484 aa3.8□□□□□ -1.8
VPS41-207ENST00000439468 CXorf56Q9H5V9 222 aa3.8□□□□□ -1.8
VPS41-207ENST00000439468 AAMDCQ9H7C9 122 aa3.8□□□□□ -1.8
VPS41-207ENST00000439468 TTC12Q9H892 705 aaPredicted RBP3.8□□□□□ -1.8
VPS41-207ENST00000439468 JMJD4Q9H9V9 463 aa3.8□□□□□ -1.8
VPS41-207ENST00000439468 SEMA4BQ9NPR2 832 aaPredicted RBP3.8□□□□□ -1.8
VPS41-207ENST00000439468 POT1Q9NUX5 634 aa3.8□□□□□ -1.8
VPS41-207ENST00000439468 HEY2Q9UBP5 337 aa3.8□□□□□ -1.8
VPS41-207ENST00000439468 AASSQ9UDR5 926 aa3.8□□□□□ -1.8
VPS41-207ENST00000439468 ICKQ9UPZ9 632 aa3.8□□□□□ -1.8
VPS41-207ENST00000439468 TNFSF13BQ9Y275 285 aa3.8□□□□□ -1.8
VPS41-207ENST00000439468 TMEM98Q9Y2Y6 226 aa3.8□□□□□ -1.8
VPS41-207ENST00000439468 A0A1W2PPH5 198 aa3.79□□□□□ -1.8
VPS41-207ENST00000439468 C2CD4BA6NLJ0 364 aa3.79□□□□□ -1.8
VPS41-207ENST00000439468 USP12O75317 370 aa3.79□□□□□ -1.8
VPS41-207ENST00000439468 NTN1O95631 604 aa3.79□□□□□ -1.8
VPS41-207ENST00000439468 CTSAP10619 480 aa3.79□□□□□ -1.8
VPS41-207ENST00000439468 TNNT1P13805 278 aa3.79□□□□□ -1.8
VPS41-207ENST00000439468 DDIT3P35638 169 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms