RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 MAGEC1O60732 1142 aa10.12□□□□□ -0.79
CDC42SE1-202ENST00000439374 RFPL1O75677 317 aa10.12□□□□□ -0.79
CDC42SE1-202ENST00000439374 ZBTB11O95625 1053 aaPredicted RBP10.12□□□□□ -0.79
CDC42SE1-202ENST00000439374 APOEP02649 317 aa10.12□□□□□ -0.79
CDC42SE1-202ENST00000439374 SERPINA6P08185 405 aa10.12□□□□□ -0.79
CDC42SE1-202ENST00000439374 SMPD1P17405 629 aa10.12□□□□□ -0.79
CDC42SE1-202ENST00000439374 MS4A2Q01362 244 aa10.12□□□□□ -0.79
CDC42SE1-202ENST00000439374 GNA12Q03113 381 aa10.12□□□□□ -0.79
CDC42SE1-202ENST00000439374 PPP1R8Q12972 351 aaKnown RBP10.12□□□□□ -0.79
CDC42SE1-202ENST00000439374 DGKDQ16760 1214 aa10.12□□□□□ -0.79
CDC42SE1-202ENST00000439374 PQLC3Q8N755 202 aa10.12□□□□□ -0.79
CDC42SE1-202ENST00000439374 TDRD5Q8NAT2 981 aaKnown RBP10.12□□□□□ -0.79
CDC42SE1-202ENST00000439374 AGAP2Q99490 1192 aa10.12□□□□□ -0.79
CDC42SE1-202ENST00000439374 THAP1Q9NVV9 213 aa10.12□□□□□ -0.79
CDC42SE1-202ENST00000439374 EBF1Q9UH73 591 aa10.12□□□□□ -0.79
CDC42SE1-202ENST00000439374 CDC14AQ9UNH5 594 aa10.12□□□□□ -0.79
CDC42SE1-202ENST00000439374 DGKBQ9Y6T7 804 aa10.12□□□□□ -0.79
CDC42SE1-202ENST00000439374 EEF2KO00418 725 aaKnown RBP10.12□□□□□ -0.79
CDC42SE1-202ENST00000439374 POMCP01189 267 aa10.12□□□□□ -0.79
CDC42SE1-202ENST00000439374 CES1P23141 567 aa10.12□□□□□ -0.79
CDC42SE1-202ENST00000439374 TKTL1P51854 596 aa10.12□□□□□ -0.79
CDC42SE1-202ENST00000439374 PCSK7Q16549 785 aa10.12□□□□□ -0.79
CDC42SE1-202ENST00000439374 IL23RQ5VWK5 629 aa10.12□□□□□ -0.79
CDC42SE1-202ENST00000439374 SYPL2Q5VXT5 272 aa10.12□□□□□ -0.79
CDC42SE1-202ENST00000439374 HFE2Q6ZVN8 426 aa10.12□□□□□ -0.79
CDC42SE1-202ENST00000439374 RIN3Q8TB24 985 aa10.12□□□□□ -0.79
CDC42SE1-202ENST00000439374 CMTM5Q96DZ9 223 aa10.12□□□□□ -0.79
CDC42SE1-202ENST00000439374 GAD1Q99259 594 aa10.12□□□□□ -0.79
CDC42SE1-202ENST00000439374 CCDC106Q9BWC9 280 aa10.12□□□□□ -0.79
CDC42SE1-202ENST00000439374 TCF7L2Q9NQB0 619 aa10.12□□□□□ -0.79
CDC42SE1-202ENST00000439374 COL2A1P02458 1487 aaPredicted RBP10.11□□□□□ -0.79
CDC42SE1-202ENST00000439374 BRCA2P51587 3418 aa10.11□□□□□ -0.79
CDC42SE1-202ENST00000439374 NEMP2A6NFY4 417 aa10.11□□□□□ -0.79
CDC42SE1-202ENST00000439374 CNMDO75829 334 aa10.11□□□□□ -0.79
CDC42SE1-202ENST00000439374 JCHAINP01591 159 aa10.11□□□□□ -0.79
CDC42SE1-202ENST00000439374 JUNP05412 331 aaKnown RBP10.11□□□□□ -0.79
CDC42SE1-202ENST00000439374 EIF2B2P49770 351 aaKnown RBP10.11□□□□□ -0.79
CDC42SE1-202ENST00000439374 MYBPC1Q00872 1141 aa10.11□□□□□ -0.79
CDC42SE1-202ENST00000439374 TRAF2Q12933 501 aa10.11□□□□□ -0.79
CDC42SE1-202ENST00000439374 BNIP3Q12983 259 aa10.11□□□□□ -0.79
CDC42SE1-202ENST00000439374 ITGADQ13349 1161 aa10.11□□□□□ -0.79
CDC42SE1-202ENST00000439374 KRT72Q14CN4 511 aa10.11□□□□□ -0.79
CDC42SE1-202ENST00000439374 OTUD3Q5T2D3 398 aaPredicted RBP10.11□□□□□ -0.79
CDC42SE1-202ENST00000439374 KLC3Q6P597 504 aa10.11□□□□□ -0.79
CDC42SE1-202ENST00000439374 NOTUMQ6P988 496 aa10.11□□□□□ -0.79
CDC42SE1-202ENST00000439374 BNC2Q6ZN30 1099 aaPredicted RBP10.11□□□□□ -0.79
CDC42SE1-202ENST00000439374 ATG14Q6ZNE5 492 aa10.11□□□□□ -0.79
CDC42SE1-202ENST00000439374 HTR3CQ8WXA8 447 aa10.11□□□□□ -0.79
CDC42SE1-202ENST00000439374 MCRS1Q96EZ8 462 aa10.11□□□□□ -0.79
CDC42SE1-202ENST00000439374 KCTD15Q96SI1 283 aaPredicted RBP10.11□□□□□ -0.79
CDC42SE1-202ENST00000439374 MROH8Q9H579 483 aa10.11□□□□□ -0.79
CDC42SE1-202ENST00000439374 COQ10BQ9H8M1 238 aa10.11□□□□□ -0.79
CDC42SE1-202ENST00000439374 CYP3A43Q9HB55 503 aa10.11□□□□□ -0.79
CDC42SE1-202ENST00000439374 XPNPEP3Q9NQH7 507 aa10.11□□□□□ -0.79
CDC42SE1-202ENST00000439374 NOD1Q9Y239 953 aa10.11□□□□□ -0.79
CDC42SE1-202ENST00000439374 FARP1Q9Y4F1 1045 aaPredicted RBP10.11□□□□□ -0.79
CDC42SE1-202ENST00000439374 ARHGAP10A1A4S6 786 aa10.11□□□□□ -0.79
CDC42SE1-202ENST00000439374 PLOD2O00469 737 aa10.11□□□□□ -0.79
CDC42SE1-202ENST00000439374 SPTLC1O15269 473 aa10.11□□□□□ -0.79
CDC42SE1-202ENST00000439374 GAS2O43903 313 aaKnown RBP10.11□□□□□ -0.79
CDC42SE1-202ENST00000439374 MFSD11O43934 449 aa10.11□□□□□ -0.79
CDC42SE1-202ENST00000439374 CPA3P15088 417 aa10.11□□□□□ -0.79
CDC42SE1-202ENST00000439374 ARRB2P32121 409 aa10.11□□□□□ -0.79
CDC42SE1-202ENST00000439374 AFF1P51825 1210 aaKnown RBP10.11□□□□□ -0.79
CDC42SE1-202ENST00000439374 TPD52P55327 224 aaPredicted RBP10.11□□□□□ -0.79
CDC42SE1-202ENST00000439374 SNX16P57768 344 aa10.11□□□□□ -0.79
CDC42SE1-202ENST00000439374 TPI1P60174 286 aa10.11□□□□□ -0.79
CDC42SE1-202ENST00000439374 DMPKQ09013 629 aa10.11□□□□□ -0.79
CDC42SE1-202ENST00000439374 KLF10Q13118 480 aa10.11□□□□□ -0.79
CDC42SE1-202ENST00000439374 PDAP1Q13442 181 aaKnown RBP10.11□□□□□ -0.79
CDC42SE1-202ENST00000439374 FUT11Q495W5 492 aa10.11□□□□□ -0.79
CDC42SE1-202ENST00000439374 ZNF280DQ6N043 979 aa10.11□□□□□ -0.79
CDC42SE1-202ENST00000439374 LCLAT1Q6UWP7 414 aa10.11□□□□□ -0.79
CDC42SE1-202ENST00000439374 TDRPQ86YL5 185 aa10.11□□□□□ -0.79
CDC42SE1-202ENST00000439374 ELMO1Q92556 727 aa10.11□□□□□ -0.79
CDC42SE1-202ENST00000439374 CSPG4P5Q96PW8 444 aa10.11□□□□□ -0.79
CDC42SE1-202ENST00000439374 CCDC90BQ9GZT6 254 aa10.11□□□□□ -0.79
CDC42SE1-202ENST00000439374 ITGA11Q9UKX5 1188 aa10.11□□□□□ -0.79
CDC42SE1-202ENST00000439374 CNTN6Q9UQ52 1028 aa10.11□□□□□ -0.79
CDC42SE1-202ENST00000439374 A0A0G2JLL6 359 aaPredicted RBP10.1□□□□□ -0.79
CDC42SE1-202ENST00000439374 CAPN14A8MX76 684 aa10.1□□□□□ -0.79
CDC42SE1-202ENST00000439374 PMPCBO75439 489 aa10.1□□□□□ -0.79
CDC42SE1-202ENST00000439374 BEST1O76090 585 aa10.1□□□□□ -0.79
CDC42SE1-202ENST00000439374 PABPC4LP0CB38 370 aaKnown RBP10.1□□□□□ -0.79
CDC42SE1-202ENST00000439374 ALDH4A1P30038 563 aa10.1□□□□□ -0.79
CDC42SE1-202ENST00000439374 RAP1GDS1P52306 607 aa10.1□□□□□ -0.79
CDC42SE1-202ENST00000439374 PRRT2Q7Z6L0 340 aaPredicted RBP10.1□□□□□ -0.79
CDC42SE1-202ENST00000439374 DSELQ8IZU8 1212 aa10.1□□□□□ -0.79
CDC42SE1-202ENST00000439374 FBXW8Q8N3Y1 598 aa10.1□□□□□ -0.79
CDC42SE1-202ENST00000439374 TSNARE1Q96NA8 513 aa10.1□□□□□ -0.79
CDC42SE1-202ENST00000439374 ULBP1Q9BZM6 244 aa10.1□□□□□ -0.79
CDC42SE1-202ENST00000439374 GIMAP2Q9UG22 337 aa10.1□□□□□ -0.79
CDC42SE1-202ENST00000439374 KIAA1217Q5T5P2 1943 aa10.1□□□□□ -0.79
CDC42SE1-202ENST00000439374 LRRC37AA6NMS7 1700 aa10.1□□□□□ -0.79
CDC42SE1-202ENST00000439374 SMIM28A0A1B0GU29 152 aa10.1□□□□□ -0.79
CDC42SE1-202ENST00000439374 A0A1W2PPW3 197 aa10.1□□□□□ -0.79
CDC42SE1-202ENST00000439374 KCNU1A8MYU2 1149 aa10.1□□□□□ -0.79
CDC42SE1-202ENST00000439374 BTBD19C9JJ37 291 aa10.1□□□□□ -0.79
CDC42SE1-202ENST00000439374 CXCL11O14625 94 aa10.1□□□□□ -0.79
CDC42SE1-202ENST00000439374 GPC4O75487 556 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms