RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 PSEN1P49768 467 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 NEK3P51956 506 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 GTF2A2P52657 109 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 LIMK2P53671 638 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 RAB10P61026 200 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 GJC2Q5T442 439 aaPredicted RBP6.79□□□□□ -1.32
CSDE1-205ENST00000438362 CERCAMQ5T4B2 595 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 C15orf39Q6ZRI6 1047 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 ADCY4Q8NFM4 1077 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 LZICQ8WZA0 190 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 KLRG1Q96E93 195 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 DCUN1D1Q96GG9 259 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 SENP8Q96LD8 212 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 RBBP8Q99708 897 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 THUMPD3Q9BV44 507 aaKnown RBP6.79□□□□□ -1.32
CSDE1-205ENST00000438362 MRPS26Q9BYN8 205 aaKnown RBP6.79□□□□□ -1.32
CSDE1-205ENST00000438362 FZD8Q9H461 694 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 FAM124BQ9H5Z6 455 aaPredicted RBP6.79□□□□□ -1.32
CSDE1-205ENST00000438362 RUBCNLQ9H714 662 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 MID1IP1Q9NPA3 183 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 RGS18Q9NS28 235 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 SEPT3Q9UH03 358 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 POMPQ9Y244 141 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 LZTS1Q9Y250 596 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 FARP1Q9Y4F1 1045 aaPredicted RBP6.79□□□□□ -1.32
CSDE1-205ENST00000438362 CNTNAP2Q9UHC6 1331 aa6.79□□□□□ -1.32
CSDE1-205ENST00000438362 M0R3G1 203 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 STX7O15400 261 aaKnown RBP6.78□□□□□ -1.32
CSDE1-205ENST00000438362 DEAF1O75398 565 aaPredicted RBP6.78□□□□□ -1.32
CSDE1-205ENST00000438362 VPS26AO75436 327 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 DLDP09622 509 aaKnown RBP6.78□□□□□ -1.32
CSDE1-205ENST00000438362 CDH2P19022 906 aaPredicted RBP6.78□□□□□ -1.32
CSDE1-205ENST00000438362 ADRA1BP35368 520 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 RGS4P49798 205 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 IDH3AP50213 366 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 TUBP50607 506 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 CA9Q16790 459 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 ZRANB3Q5FWF4 1079 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 C10orf120Q5SQS8 335 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 B3GNT9Q6UX72 402 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 CHRDL2Q6WN34 429 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 TAS1R3Q7RTX0 852 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 MIB1Q86YT6 1006 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 DSELQ8IZU8 1212 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 TERB1Q8NA31 727 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 FAM162AQ96A26 154 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 BTBD9Q96Q07 612 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 TWNKQ96RR1 684 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 MRPL57Q9BQC6 102 aaKnown RBP6.78□□□□□ -1.32
CSDE1-205ENST00000438362 DCUN1D5Q9BTE7 237 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 C9orf16Q9BUW7 83 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 ZNF395Q9H8N7 513 aaPredicted RBP6.78□□□□□ -1.32
CSDE1-205ENST00000438362 ARHGEF4Q9NR80 690 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 PDGFCQ9NRA1 345 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 LATS2Q9NRM7 1088 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 HMGXB4Q9UGU5 601 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 FBXO5Q9UKT4 447 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 PCDHB12Q9Y5F1 795 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 CASTOR2A6NHX0 329 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 IRF6O14896 467 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 TADA2AO75478 443 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 LTA4HP09960 611 aaKnown RBP6.78□□□□□ -1.32
CSDE1-205ENST00000438362 CCDC166P0CW27 439 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 TFEBP19484 476 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 CYP2B6P20813 491 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 ADORA2AP29274 412 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 PRDX6P30041 224 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 RAP1GDS1P52306 607 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 ADARP55265 1226 aaKnown RBP6.78□□□□□ -1.32
CSDE1-205ENST00000438362 PLIN5Q00G26 463 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 MBTD1Q05BQ5 628 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 CTBP1Q13363 440 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 SEMA5AQ13591 1074 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 SQLEQ14534 574 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 SLC10A6Q3KNW5 377 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 GNASQ5JWF2 1037 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 PTRHD1Q6GMV3 140 aaKnown RBP6.78□□□□□ -1.32
CSDE1-205ENST00000438362 GLB1LQ6UWU2 654 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 CAMK1DQ8IU85 385 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 MIER2Q8N344 545 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 SNX19Q92543 992 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 CEP19Q96LK0 163 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 PPP1R10Q96QC0 940 aaKnown RBP6.78□□□□□ -1.32
CSDE1-205ENST00000438362 GATA5Q9BWX5 397 aaPredicted RBP6.78□□□□□ -1.32
CSDE1-205ENST00000438362 EBF3Q9H4W6 596 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 PDZD7Q9H5P4 517 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 SPAG4Q9NPE6 437 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 ADARB2Q9NS39 739 aaKnown RBP6.78□□□□□ -1.32
CSDE1-205ENST00000438362 DTLQ9NZJ0 730 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 AFF4Q9UHB7 1163 aaKnown RBP6.78□□□□□ -1.32
CSDE1-205ENST00000438362 PKP3Q9Y446 797 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 PLCH1Q4KWH8 1693 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 NCF1BA6NI72 391 aaPredicted RBP6.78□□□□□ -1.32
CSDE1-205ENST00000438362 C2orf81A6NN90 581 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 ZNF839A8K0R7 811 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 NCF1CA8MVU1 366 aaPredicted RBP6.78□□□□□ -1.32
CSDE1-205ENST00000438362 E7ESA3 106 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 LDLRP01130 860 aa6.78□□□□□ -1.32
CSDE1-205ENST00000438362 NCF1P14598 390 aaPredicted RBP6.78□□□□□ -1.32
CSDE1-205ENST00000438362 HNRNPLP14866 589 aaKnown RBP eCLIP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms