RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 ARL13AQ5H913 290 aaPredicted RBP17.03■□□□□ 0.32
TTC3-209ENST00000438055 ATG14Q6ZNE5 492 aa17.03■□□□□ 0.32
TTC3-209ENST00000438055 OR6Y1Q8NGX8 325 aa17.03■□□□□ 0.32
TTC3-209ENST00000438055 CDRT15Q96T59 188 aa17.03■□□□□ 0.32
TTC3-209ENST00000438055 GBA3Q9H227 469 aa17.03■□□□□ 0.32
TTC3-209ENST00000438055 FBXW11Q9UKB1 542 aa17.03■□□□□ 0.32
TTC3-209ENST00000438055 ADAM28Q9UKQ2 775 aa17.03■□□□□ 0.32
TTC3-209ENST00000438055 ITGAXP20702 1163 aa17.03■□□□□ 0.32
TTC3-209ENST00000438055 CPOXP36551 454 aa17.03■□□□□ 0.32
TTC3-209ENST00000438055 PSEN1P49768 467 aa17.03■□□□□ 0.32
TTC3-209ENST00000438055 MPP1Q00013 466 aa17.03■□□□□ 0.32
TTC3-209ENST00000438055 STXBP5Q5T5C0 1151 aa17.03■□□□□ 0.32
TTC3-209ENST00000438055 SCN4BQ8IWT1 228 aa17.03■□□□□ 0.32
TTC3-209ENST00000438055 SERPINI1Q99574 410 aa17.03■□□□□ 0.32
TTC3-209ENST00000438055 PAPOLBQ9NRJ5 636 aaKnown RBP17.03■□□□□ 0.32
TTC3-209ENST00000438055 TRHDEQ9UKU6 1024 aa17.03■□□□□ 0.32
TTC3-209ENST00000438055 ACOT9Q9Y305 439 aa17.03■□□□□ 0.32
TTC3-209ENST00000438055 LYNP07948 512 aa17.02■□□□□ 0.32
TTC3-209ENST00000438055 MYL4P12829 197 aa17.02■□□□□ 0.32
TTC3-209ENST00000438055 CD68P34810 354 aaPredicted RBP17.02■□□□□ 0.32
TTC3-209ENST00000438055 NPY2RP49146 381 aa17.02■□□□□ 0.32
TTC3-209ENST00000438055 DBN1Q16643 649 aa17.02■□□□□ 0.32
TTC3-209ENST00000438055 KIAA0319Q5VV43 1072 aa17.02■□□□□ 0.32
TTC3-209ENST00000438055 SMG8Q8ND04 991 aaKnown RBP17.02■□□□□ 0.32
TTC3-209ENST00000438055 C1orf21Q9H246 121 aa17.02■□□□□ 0.32
TTC3-209ENST00000438055 XPR1Q9UBH6 696 aa17.02■□□□□ 0.32
TTC3-209ENST00000438055 ZCWPW2A0A1B0GU75 182 aa17.02■□□□□ 0.32
TTC3-209ENST00000438055 MT-CO1P00395 513 aa17.02■□□□□ 0.32
TTC3-209ENST00000438055 KCNE1P15382 129 aa17.02■□□□□ 0.32
TTC3-209ENST00000438055 PPIDQ08752 370 aaKnown RBP17.02■□□□□ 0.32
TTC3-209ENST00000438055 LBRQ14739 615 aaKnown RBP17.02■□□□□ 0.32
TTC3-209ENST00000438055 ARHGAP36Q6ZRI8 547 aa17.02■□□□□ 0.32
TTC3-209ENST00000438055 EXT2Q93063 718 aa17.02■□□□□ 0.32
TTC3-209ENST00000438055 LRGUKQ96M69 825 aa17.02■□□□□ 0.32
TTC3-209ENST00000438055 KLHL4Q9C0H6 718 aa17.02■□□□□ 0.32
TTC3-209ENST00000438055 CNGB3Q9NQW8 809 aa17.02■□□□□ 0.32
TTC3-209ENST00000438055 ADA2Q9NZK5 511 aa17.02■□□□□ 0.32
TTC3-209ENST00000438055 ANK1P16157 1881 aa17.02■□□□□ 0.32
TTC3-209ENST00000438055 PTGESO14684 152 aa17.02■□□□□ 0.31
TTC3-209ENST00000438055 F2P00734 622 aa17.02■□□□□ 0.31
TTC3-209ENST00000438055 F9P00740 461 aa17.02■□□□□ 0.31
TTC3-209ENST00000438055 LHX1P48742 406 aa17.02■□□□□ 0.31
TTC3-209ENST00000438055 RPL14P50914 215 aaKnown RBP17.02■□□□□ 0.31
TTC3-209ENST00000438055 PLK1P53350 603 aa17.02■□□□□ 0.31
TTC3-209ENST00000438055 COG7P83436 770 aa17.02■□□□□ 0.31
TTC3-209ENST00000438055 TUBB3Q13509 450 aa17.02■□□□□ 0.31
TTC3-209ENST00000438055 FLOT2Q14254 428 aa17.02■□□□□ 0.31
TTC3-209ENST00000438055 GEN1Q17RS7 908 aa17.02■□□□□ 0.31
TTC3-209ENST00000438055 UBXN11Q5T124 520 aa17.02■□□□□ 0.31
TTC3-209ENST00000438055 METTL23Q86XA0 190 aa17.02■□□□□ 0.31
TTC3-209ENST00000438055 ICA1LQ8NDH6 482 aa17.02■□□□□ 0.31
TTC3-209ENST00000438055 PPP2R3CQ969Q6 453 aa17.02■□□□□ 0.31
TTC3-209ENST00000438055 FAM136AQ96C01 138 aa17.02■□□□□ 0.31
TTC3-209ENST00000438055 FTHL17Q9BXU8 183 aa17.02■□□□□ 0.31
TTC3-209ENST00000438055 CDYLQ9Y232 598 aa17.02■□□□□ 0.31
TTC3-209ENST00000438055 FYNP06241 537 aa17.01■□□□□ 0.31
TTC3-209ENST00000438055 THRAP10827 490 aa17.01■□□□□ 0.31
TTC3-209ENST00000438055 CALRP27797 417 aaKnown RBP17.01■□□□□ 0.31
TTC3-209ENST00000438055 PIK3R1P27986 724 aa17.01■□□□□ 0.31
TTC3-209ENST00000438055 MRPS22P82650 360 aaKnown RBP17.01■□□□□ 0.31
TTC3-209ENST00000438055 CDK18Q07002 472 aa17.01■□□□□ 0.31
TTC3-209ENST00000438055 CNGA3Q16281 694 aa17.01■□□□□ 0.31
TTC3-209ENST00000438055 MAP3K21Q5TCX8 1036 aa17.01■□□□□ 0.31
TTC3-209ENST00000438055 OLFML2BQ68BL8 750 aa17.01■□□□□ 0.31
TTC3-209ENST00000438055 ZNF470Q6ECI4 717 aa17.01■□□□□ 0.31
TTC3-209ENST00000438055 TAC4Q86UU9 113 aa17.01■□□□□ 0.31
TTC3-209ENST00000438055 ST13P4Q8IZP2 240 aaPredicted RBP17.01■□□□□ 0.31
TTC3-209ENST00000438055 GCNAQ96QF7 691 aa17.01■□□□□ 0.31
TTC3-209ENST00000438055 TUBGCP5Q96RT8 1024 aa17.01■□□□□ 0.31
TTC3-209ENST00000438055 PARK7Q99497 189 aaKnown RBP17.01■□□□□ 0.31
TTC3-209ENST00000438055 KATNBL1Q9H079 304 aa17.01■□□□□ 0.31
TTC3-209ENST00000438055 GPAMQ9HCL2 828 aa17.01■□□□□ 0.31
TTC3-209ENST00000438055 SLC38A7Q9NVC3 462 aa17.01■□□□□ 0.31
TTC3-209ENST00000438055 RBM47A0AV96 593 aaKnown RBP17.01■□□□□ 0.31
TTC3-209ENST00000438055 MAGEB16A2A368 324 aa17.01■□□□□ 0.31
TTC3-209ENST00000438055 I6L893 689 aaPredicted RBP17.01■□□□□ 0.31
TTC3-209ENST00000438055 HDAC3O15379 428 aa17.01■□□□□ 0.31
TTC3-209ENST00000438055 MAP3K13O43283 966 aa17.01■□□□□ 0.31
TTC3-209ENST00000438055 STMN1P16949 149 aa17.01■□□□□ 0.31
TTC3-209ENST00000438055 PCSK1P29120 753 aa17.01■□□□□ 0.31
TTC3-209ENST00000438055 HARS2P49590 506 aaKnown RBP17.01■□□□□ 0.31
TTC3-209ENST00000438055 IRX1P78414 480 aaPredicted RBP17.01■□□□□ 0.31
TTC3-209ENST00000438055 BTBD8Q5XKL5 378 aa17.01■□□□□ 0.31
TTC3-209ENST00000438055 USP50Q70EL3 339 aaPredicted RBP17.01■□□□□ 0.31
TTC3-209ENST00000438055 TMEM135Q86UB9 458 aa17.01■□□□□ 0.31
TTC3-209ENST00000438055 SPATA24Q86W54 205 aa17.01■□□□□ 0.31
TTC3-209ENST00000438055 SPNS2Q8IVW8 549 aa17.01■□□□□ 0.31
TTC3-209ENST00000438055 PPHLN1Q8NEY8 458 aaKnown RBP17.01■□□□□ 0.31
TTC3-209ENST00000438055 MYLPFQ96A32 169 aa17.01■□□□□ 0.31
TTC3-209ENST00000438055 RCN3Q96D15 328 aa17.01■□□□□ 0.31
TTC3-209ENST00000438055 TEKT5Q96M29 485 aa17.01■□□□□ 0.31
TTC3-209ENST00000438055 WDR6Q9NNW5 1121 aaKnown RBP17.01■□□□□ 0.31
TTC3-209ENST00000438055 ERI2A8K979 691 aaKnown RBP17.01■□□□□ 0.31
TTC3-209ENST00000438055 MSI1O43347 362 aaKnown RBP17.01■□□□□ 0.31
TTC3-209ENST00000438055 DDHD2O94830 711 aa17.01■□□□□ 0.31
TTC3-209ENST00000438055 BRCC3P46736 316 aa17.01■□□□□ 0.31
TTC3-209ENST00000438055 CRYBB1P53674 252 aaPredicted RBP17.01■□□□□ 0.31
TTC3-209ENST00000438055 CYLC2Q14093 348 aaPredicted RBP17.01■□□□□ 0.31
TTC3-209ENST00000438055 CSHL1Q14406 222 aa17.01■□□□□ 0.31
TTC3-209ENST00000438055 LSM12Q3MHD2 195 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms