RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 SLC9A9Q8IVB4 645 aa16.09■□□□□ 0.17
PTPN13-204ENST00000436978 DEFB107AQ8IZN7 70 aa16.09■□□□□ 0.17
PTPN13-204ENST00000436978 EIF1ADQ8N9N8 165 aaKnown RBP16.09■□□□□ 0.17
PTPN13-204ENST00000436978 ANKRD52Q8NB46 1076 aa16.09■□□□□ 0.17
PTPN13-204ENST00000436978 CEP41Q9BYV8 373 aa16.09■□□□□ 0.17
PTPN13-204ENST00000436978 URADA6NGE7 173 aa16.09■□□□□ 0.17
PTPN13-204ENST00000436978 ANKDD1BA6NHY2 528 aa16.09■□□□□ 0.17
PTPN13-204ENST00000436978 PARNO95453 639 aaKnown RBP16.09■□□□□ 0.17
PTPN13-204ENST00000436978 SCNN1GP51170 649 aa16.09■□□□□ 0.17
PTPN13-204ENST00000436978 STAG3L4Q8TBR4 150 aa16.09■□□□□ 0.17
PTPN13-204ENST00000436978 ZNF711Q9Y462 761 aa16.09■□□□□ 0.17
PTPN13-204ENST00000436978 CCNB1P14635 433 aa16.08■□□□□ 0.17
PTPN13-204ENST00000436978 MFSD7Q6UXD7 560 aa16.08■□□□□ 0.17
PTPN13-204ENST00000436978 PAGE2Q7Z2X7 111 aa16.08■□□□□ 0.17
PTPN13-204ENST00000436978 CAMKK1Q8N5S9 505 aa16.08■□□□□ 0.17
PTPN13-204ENST00000436978 MLPHQ9BV36 600 aaPredicted RBP16.08■□□□□ 0.17
PTPN13-204ENST00000436978 PEAK1Q9H792 1746 aa16.08■□□□□ 0.17
PTPN13-204ENST00000436978 TNFRSF8P28908 595 aa16.08■□□□□ 0.17
PTPN13-204ENST00000436978 NEK3P51956 506 aa16.08■□□□□ 0.17
PTPN13-204ENST00000436978 FAM187BQ17R55 369 aa16.08■□□□□ 0.17
PTPN13-204ENST00000436978 CCDC103Q8IW40 242 aa16.08■□□□□ 0.17
PTPN13-204ENST00000436978 TCP10LQ8TDR4 215 aa16.08■□□□□ 0.17
PTPN13-204ENST00000436978 OXNAD1Q96HP4 312 aaPredicted RBP16.08■□□□□ 0.17
PTPN13-204ENST00000436978 NDOR1Q9UHB4 597 aa16.08■□□□□ 0.17
PTPN13-204ENST00000436978 GLI1P08151 1106 aa16.08■□□□□ 0.16
PTPN13-204ENST00000436978 SERPINB3P29508 390 aa16.08■□□□□ 0.16
PTPN13-204ENST00000436978 BMPR2Q13873 1038 aa16.08■□□□□ 0.16
PTPN13-204ENST00000436978 CHADLQ6NUI6 762 aa16.08■□□□□ 0.16
PTPN13-204ENST00000436978 IL27RAQ6UWB1 636 aa16.08■□□□□ 0.16
PTPN13-204ENST00000436978 RIPOR1Q6ZS17 1223 aa16.08■□□□□ 0.16
PTPN13-204ENST00000436978 C16orf62Q7Z3J2 963 aa16.08■□□□□ 0.16
PTPN13-204ENST00000436978 KRT73Q86Y46 540 aa16.08■□□□□ 0.16
PTPN13-204ENST00000436978 AADATQ8N5Z0 425 aa16.08■□□□□ 0.16
PTPN13-204ENST00000436978 LACRTQ9GZZ8 138 aa16.08■□□□□ 0.16
PTPN13-204ENST00000436978 IRF6O14896 467 aa16.08■□□□□ 0.16
PTPN13-204ENST00000436978 ZCWPW2Q504Y3 356 aa16.08■□□□□ 0.16
PTPN13-204ENST00000436978 SLC30A9Q6PML9 568 aa16.08■□□□□ 0.16
PTPN13-204ENST00000436978 DHFR2Q86XF0 187 aa16.08■□□□□ 0.16
PTPN13-204ENST00000436978 TOP6BLQ8N6T0 577 aa16.08■□□□□ 0.16
PTPN13-204ENST00000436978 GDF3Q9NR23 364 aa16.08■□□□□ 0.16
PTPN13-204ENST00000436978 ZMYM5Q9UJ78 669 aa16.08■□□□□ 0.16
PTPN13-204ENST00000436978 PDE2AO00408 941 aaPredicted RBP16.08■□□□□ 0.16
PTPN13-204ENST00000436978 SPTLC1O15269 473 aa16.08■□□□□ 0.16
PTPN13-204ENST00000436978 TSHRP16473 764 aa16.08■□□□□ 0.16
PTPN13-204ENST00000436978 ZNHIT3Q15649 155 aaPredicted RBP16.08■□□□□ 0.16
PTPN13-204ENST00000436978 BHLHB9Q6PI77 547 aa16.08■□□□□ 0.16
PTPN13-204ENST00000436978 TMPRSS6Q8IU80 811 aa16.08■□□□□ 0.16
PTPN13-204ENST00000436978 FAM71AQ8IYT1 594 aa16.08■□□□□ 0.16
PTPN13-204ENST00000436978 FUT8Q9BYC5 575 aa16.08■□□□□ 0.16
PTPN13-204ENST00000436978 BTBD7Q9P203 1132 aa16.08■□□□□ 0.16
PTPN13-204ENST00000436978 NFKBIL1Q9UBC1 381 aaPredicted RBP16.08■□□□□ 0.16
PTPN13-204ENST00000436978 RWDD3Q9Y3V2 267 aa16.08■□□□□ 0.16
PTPN13-204ENST00000436978 PTCH2Q9Y6C5 1203 aa16.08■□□□□ 0.16
PTPN13-204ENST00000436978 SMIM31A0A1B0GVY4 71 aa16.08■□□□□ 0.16
PTPN13-204ENST00000436978 MYL12AP19105 171 aa16.08■□□□□ 0.16
PTPN13-204ENST00000436978 MEA1Q16626 185 aa16.08■□□□□ 0.16
PTPN13-204ENST00000436978 SAMD4BQ5PRF9 694 aaKnown RBP16.08■□□□□ 0.16
PTPN13-204ENST00000436978 RPTORQ8N122 1335 aa16.08■□□□□ 0.16
PTPN13-204ENST00000436978 DNAJC1Q96KC8 554 aaKnown RBP16.08■□□□□ 0.16
PTPN13-204ENST00000436978 ZNF232Q9UNY5 417 aa16.08■□□□□ 0.16
PTPN13-204ENST00000436978 LOC102724159A0A0B4J2E5 919 aa16.07■□□□□ 0.16
PTPN13-204ENST00000436978 TBL1XO60907 577 aa16.07■□□□□ 0.16
PTPN13-204ENST00000436978 PWP2Q15269 919 aaKnown RBP16.07■□□□□ 0.16
PTPN13-204ENST00000436978 RGMBQ6NW40 437 aa16.07■□□□□ 0.16
PTPN13-204ENST00000436978 ZBTB49Q6ZSB9 765 aa16.07■□□□□ 0.16
PTPN13-204ENST00000436978 FAM126BQ8IXS8 530 aa16.07■□□□□ 0.16
PTPN13-204ENST00000436978 DUSP9Q99956 384 aaKnown RBP16.07■□□□□ 0.16
PTPN13-204ENST00000436978 BLOC1S4Q9NUP1 217 aa16.07■□□□□ 0.16
PTPN13-204ENST00000436978 CATP04040 527 aaKnown RBP16.07■□□□□ 0.16
PTPN13-204ENST00000436978 ATP6V1B1P15313 513 aa16.07■□□□□ 0.16
PTPN13-204ENST00000436978 CDC25CP30307 473 aa16.07■□□□□ 0.16
PTPN13-204ENST00000436978 RERGQ96A58 199 aaPredicted RBP16.07■□□□□ 0.16
PTPN13-204ENST00000436978 MRPS23Q9Y3D9 190 aaKnown RBP16.07■□□□□ 0.16
PTPN13-204ENST00000436978 SIGLEC1Q9BZZ2 1709 aa16.07■□□□□ 0.16
PTPN13-204ENST00000436978 SMIM35A0A1B0GVV1 85 aa16.07■□□□□ 0.16
PTPN13-204ENST00000436978 ANKRD63C9JTQ0 380 aa16.07■□□□□ 0.16
PTPN13-204ENST00000436978 DENND1CQ8IV53 801 aa16.07■□□□□ 0.16
PTPN13-204ENST00000436978 MTERF3Q96E29 417 aa16.07■□□□□ 0.16
PTPN13-204ENST00000436978 CORO1BQ9BR76 489 aa16.07■□□□□ 0.16
PTPN13-204ENST00000436978 RAB23Q9ULC3 237 aa16.07■□□□□ 0.16
PTPN13-204ENST00000436978 TPP1O14773 563 aa16.07■□□□□ 0.16
PTPN13-204ENST00000436978 ZFPM1Q8IX07 1006 aa16.07■□□□□ 0.16
PTPN13-204ENST00000436978 LRRC52Q8N7C0 313 aa16.07■□□□□ 0.16
PTPN13-204ENST00000436978 POP5Q969H6 163 aaKnown RBP16.07■□□□□ 0.16
PTPN13-204ENST00000436978 BCL9LQ86UU0 1499 aa16.07■□□□□ 0.16
PTPN13-204ENST00000436978 PAICSP22234 425 aaKnown RBP16.07■□□□□ 0.16
PTPN13-204ENST00000436978 AGMOQ6ZNB7 445 aa16.07■□□□□ 0.16
PTPN13-204ENST00000436978 C19orf18Q8NEA5 215 aa16.07■□□□□ 0.16
PTPN13-204ENST00000436978 MYLPFQ96A32 169 aa16.07■□□□□ 0.16
PTPN13-204ENST00000436978 KLHL3Q9UH77 587 aa16.07■□□□□ 0.16
PTPN13-204ENST00000436978 DUSP12Q9UNI6 340 aa16.07■□□□□ 0.16
PTPN13-204ENST00000436978 DDX3XO00571 662 aaKnown RBP eCLIP16.07■□□□□ 0.16
PTPN13-204ENST00000436978 RARAP10276 462 aa16.07■□□□□ 0.16
PTPN13-204ENST00000436978 HTR1BP28222 390 aa16.07■□□□□ 0.16
PTPN13-204ENST00000436978 NUMBP49757 651 aa16.07■□□□□ 0.16
PTPN13-204ENST00000436978 CLK3P49761 638 aaKnown RBP16.07■□□□□ 0.16
PTPN13-204ENST00000436978 DEFB115Q30KQ5 88 aa16.07■□□□□ 0.16
PTPN13-204ENST00000436978 CDC73Q6P1J9 531 aa16.07■□□□□ 0.16
PTPN13-204ENST00000436978 MOSPD2Q8NHP6 518 aa16.07■□□□□ 0.16
PTPN13-204ENST00000436978 ZFP28Q8NHY6 868 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms