RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 PRMT1Q99873 361 aaKnown RBP15.2■□□□□ 0.02
HDAC8-213ENST00000436675 FEM1AQ9BSK4 669 aa15.2■□□□□ 0.02
HDAC8-213ENST00000436675 FAM204AQ9H8W3 233 aa15.2■□□□□ 0.02
HDAC8-213ENST00000436675 ARMCX3Q9UH62 379 aaPredicted RBP15.2■□□□□ 0.02
HDAC8-213ENST00000436675 SLC12A6Q9UHW9 1150 aa15.2■□□□□ 0.02
HDAC8-213ENST00000436675 ZFR2Q9UPR6 939 aaKnown RBP15.2■□□□□ 0.02
HDAC8-213ENST00000436675 UBR5O95071 2799 aaPredicted RBP15.2■□□□□ 0.02
HDAC8-213ENST00000436675 FLNCQ14315 2725 aa15.19■□□□□ 0.02
HDAC8-213ENST00000436675 K7ENP7 123 aa15.19■□□□□ 0.02
HDAC8-213ENST00000436675 CASC3O15234 703 aaKnown RBP15.19■□□□□ 0.02
HDAC8-213ENST00000436675 ALOX15BO15296 676 aa15.19■□□□□ 0.02
HDAC8-213ENST00000436675 SLC16A3O15427 465 aaKnown RBP15.19■□□□□ 0.02
HDAC8-213ENST00000436675 SART1O43290 800 aaKnown RBP15.19■□□□□ 0.02
HDAC8-213ENST00000436675 MT-CO1P00395 513 aa15.19■□□□□ 0.02
HDAC8-213ENST00000436675 CHRNA3P32297 505 aa15.19■□□□□ 0.02
HDAC8-213ENST00000436675 PRCPP42785 496 aa15.19■□□□□ 0.02
HDAC8-213ENST00000436675 GPD2P43304 727 aa15.19■□□□□ 0.02
HDAC8-213ENST00000436675 FMO5P49326 533 aa15.19■□□□□ 0.02
HDAC8-213ENST00000436675 PMS1P54277 932 aaKnown RBP15.19■□□□□ 0.02
HDAC8-213ENST00000436675 NFATC3Q12968 1075 aa15.19■□□□□ 0.02
HDAC8-213ENST00000436675 MAPK8IP2Q13387 824 aaPredicted RBP15.19■□□□□ 0.02
HDAC8-213ENST00000436675 TAF5Q15542 800 aa15.19■□□□□ 0.02
HDAC8-213ENST00000436675 INO80CQ6PI98 192 aaPredicted RBP15.19■□□□□ 0.02
HDAC8-213ENST00000436675 CCDC81Q6ZN84 652 aa15.19■□□□□ 0.02
HDAC8-213ENST00000436675 CHST14Q8NCH0 376 aa15.19■□□□□ 0.02
HDAC8-213ENST00000436675 SLC46A1Q96NT5 459 aa15.19■□□□□ 0.02
HDAC8-213ENST00000436675 TSG101Q99816 390 aa15.19■□□□□ 0.02
HDAC8-213ENST00000436675 DYRK4Q9NR20 520 aa15.19■□□□□ 0.02
HDAC8-213ENST00000436675 EVA1BQ9NVM1 165 aa15.19■□□□□ 0.02
HDAC8-213ENST00000436675 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.19■□□□□ 0.02
HDAC8-213ENST00000436675 VANGL2Q9ULK5 521 aa15.19■□□□□ 0.02
HDAC8-213ENST00000436675 ENTPD2Q9Y5L3 495 aa15.19■□□□□ 0.02
HDAC8-213ENST00000436675 TLN1Q9Y490 2541 aaKnown RBP15.19■□□□□ 0.02
HDAC8-213ENST00000436675 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.18■□□□□ 0.02
HDAC8-213ENST00000436675 TRIM49BA6NDI0 452 aa15.18■□□□□ 0.02
HDAC8-213ENST00000436675 E5RJQ4 531 aa15.18■□□□□ 0.02
HDAC8-213ENST00000436675 K7ERQ8 282 aa15.18■□□□□ 0.02
HDAC8-213ENST00000436675 SNAP91O60641 907 aa15.18■□□□□ 0.02
HDAC8-213ENST00000436675 SRCP12931 536 aa15.18■□□□□ 0.02
HDAC8-213ENST00000436675 OXCT1P55809 520 aa15.18■□□□□ 0.02
HDAC8-213ENST00000436675 HNRNPKP61978 463 aaKnown RBP eCLIP15.18■□□□□ 0.02
HDAC8-213ENST00000436675 ZNF177Q13360 481 aaPredicted RBP15.18■□□□□ 0.02
HDAC8-213ENST00000436675 FZD2Q14332 565 aa15.18■□□□□ 0.02
HDAC8-213ENST00000436675 DEFB133Q30KQ1 61 aa15.18■□□□□ 0.02
HDAC8-213ENST00000436675 TTC39BQ5VTQ0 682 aaPredicted RBP15.18■□□□□ 0.02
HDAC8-213ENST00000436675 ARHGEF19Q8IW93 802 aa15.18■□□□□ 0.02
HDAC8-213ENST00000436675 ATP11CQ8NB49 1132 aa15.18■□□□□ 0.02
HDAC8-213ENST00000436675 ZNF548Q8NEK5 533 aaPredicted RBP15.18■□□□□ 0.02
HDAC8-213ENST00000436675 GRIN3AQ8TCU5 1115 aa15.18■□□□□ 0.02
HDAC8-213ENST00000436675 SNRNP27Q8WVK2 155 aaKnown RBP15.18■□□□□ 0.02
HDAC8-213ENST00000436675 PRR11Q96HE9 360 aaPredicted RBP15.18■□□□□ 0.02
HDAC8-213ENST00000436675 DUSP23Q9BVJ7 150 aa15.18■□□□□ 0.02
HDAC8-213ENST00000436675 MUC3BQ9H195 1237 aa15.18■□□□□ 0.02
HDAC8-213ENST00000436675 GOLPH3LQ9H4A5 285 aa15.18■□□□□ 0.02
HDAC8-213ENST00000436675 SYNDIG1Q9H7V2 258 aa15.18■□□□□ 0.02
HDAC8-213ENST00000436675 POPDC2Q9HBU9 364 aa15.18■□□□□ 0.02
HDAC8-213ENST00000436675 FARP1Q9Y4F1 1045 aaPredicted RBP15.18■□□□□ 0.02
HDAC8-213ENST00000436675 HEMK1Q9Y5R4 338 aaPredicted RBP15.18■□□□□ 0.02
HDAC8-213ENST00000436675 AHCTF1Q8WYP5 2266 aa15.18■□□□□ 0.02
HDAC8-213ENST00000436675 DOPEY2Q9Y3R5 2298 aa15.18■□□□□ 0.02
HDAC8-213ENST00000436675 POM121BA6NF01 834 aa15.17■□□□□ 0.02
HDAC8-213ENST00000436675 A6NNZ2 444 aa15.17■□□□□ 0.02
HDAC8-213ENST00000436675 MUSKO15146 869 aa15.17■□□□□ 0.02
HDAC8-213ENST00000436675 ENDOD1O94919 500 aa15.17■□□□□ 0.02
HDAC8-213ENST00000436675 TNFSF15O95150 251 aa15.17■□□□□ 0.02
HDAC8-213ENST00000436675 IGLV3-25P01717 112 aa15.17■□□□□ 0.02
HDAC8-213ENST00000436675 KRT5P13647 590 aa15.17■□□□□ 0.02
HDAC8-213ENST00000436675 RRM1P23921 792 aa15.17■□□□□ 0.02
HDAC8-213ENST00000436675 ACADSBP45954 432 aa15.17■□□□□ 0.02
HDAC8-213ENST00000436675 VASPP50552 380 aaPredicted RBP15.17■□□□□ 0.02
HDAC8-213ENST00000436675 YWHAZP63104 245 aaKnown RBP15.17■□□□□ 0.02
HDAC8-213ENST00000436675 NFKB2Q00653 900 aa15.17■□□□□ 0.02
HDAC8-213ENST00000436675 FKBP3Q00688 224 aaKnown RBP15.17■□□□□ 0.02
HDAC8-213ENST00000436675 CLN3Q13286 438 aa15.17■□□□□ 0.02
HDAC8-213ENST00000436675 PNOCQ13519 176 aa15.17■□□□□ 0.02
HDAC8-213ENST00000436675 AUHQ13825 339 aaKnown RBP15.17■□□□□ 0.02
HDAC8-213ENST00000436675 ARSIQ5FYB1 569 aa15.17■□□□□ 0.02
HDAC8-213ENST00000436675 PERM1Q5SV97 790 aa15.17■□□□□ 0.02
HDAC8-213ENST00000436675 C6orf132Q5T0Z8 1188 aa15.17■□□□□ 0.02
HDAC8-213ENST00000436675 ZCCHC8Q6NZY4 707 aaKnown RBP15.17■□□□□ 0.02
HDAC8-213ENST00000436675 NEK5Q6P3R8 708 aa15.17■□□□□ 0.02
HDAC8-213ENST00000436675 RBM44Q6ZP01 1051 aaKnown RBP15.17■□□□□ 0.02
HDAC8-213ENST00000436675 ABI3BPQ7Z7G0 1075 aa15.17■□□□□ 0.02
HDAC8-213ENST00000436675 C14orf80Q86SX3 495 aa15.17■□□□□ 0.02
HDAC8-213ENST00000436675 EXD3Q8N9H8 876 aa15.17■□□□□ 0.02
HDAC8-213ENST00000436675 LMX1AQ8TE12 382 aa15.17■□□□□ 0.02
HDAC8-213ENST00000436675 BMFQ96LC9 184 aa15.17■□□□□ 0.02
HDAC8-213ENST00000436675 PPP1R9BQ96SB3 815 aa15.17■□□□□ 0.02
HDAC8-213ENST00000436675 FAM117AQ9C073 453 aa15.17■□□□□ 0.02
HDAC8-213ENST00000436675 TNKS2Q9H2K2 1166 aa15.17■□□□□ 0.02
HDAC8-213ENST00000436675 USP29Q9HBJ7 922 aa15.17■□□□□ 0.02
HDAC8-213ENST00000436675 DDIT4Q9NX09 232 aa15.17■□□□□ 0.02
HDAC8-213ENST00000436675 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.17■□□□□ 0.02
HDAC8-213ENST00000436675 IPO11Q9UI26 975 aaKnown RBP15.17■□□□□ 0.02
HDAC8-213ENST00000436675 KLF15Q9UIH9 416 aa15.17■□□□□ 0.02
HDAC8-213ENST00000436675 SSUH2Q9Y2M2 353 aa15.17■□□□□ 0.02
HDAC8-213ENST00000436675 OR51B4Q9Y5P0 310 aa15.17■□□□□ 0.02
HDAC8-213ENST00000436675 FAM237AA0A1B0GTK4 181 aa15.16■□□□□ 0.02
HDAC8-213ENST00000436675 RAD51BO15315 384 aa15.16■□□□□ 0.02
HDAC8-213ENST00000436675 SMAD6O43541 496 aaKnown RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms