RNA–Protein interactions for RNA: ENST00000433655.5

CTSD-204, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 2,006 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-204ENST00000433655 A0A1W2PQH9 124 aa17.3■□□□□ 0.36
CTSD-204ENST00000433655 CCDC78A2IDD5 438 aa17.3■□□□□ 0.36
CTSD-204ENST00000433655 MPOP05164 745 aa17.3■□□□□ 0.36
CTSD-204ENST00000433655 ATP5BP06576 529 aaKnown RBP17.3■□□□□ 0.36
CTSD-204ENST00000433655 CPA3P15088 417 aa17.3■□□□□ 0.36
CTSD-204ENST00000433655 ALOX15P16050 662 aaPredicted RBP17.3■□□□□ 0.36
CTSD-204ENST00000433655 GRK2P25098 689 aa17.3■□□□□ 0.36
CTSD-204ENST00000433655 HTR7P34969 479 aa17.3■□□□□ 0.36
CTSD-204ENST00000433655 ITGA9Q13797 1035 aa17.3■□□□□ 0.36
CTSD-204ENST00000433655 UBAP2LQ14157 1087 aaKnown RBP17.3■□□□□ 0.36
CTSD-204ENST00000433655 URGCPQ8TCY9 931 aa17.3■□□□□ 0.36
CTSD-204ENST00000433655 TBL1YQ9BQ87 522 aa17.3■□□□□ 0.36
CTSD-204ENST00000433655 ZCWPW1Q9H0M4 648 aa17.3■□□□□ 0.36
CTSD-204ENST00000433655 GLOD4Q9HC38 313 aa17.3■□□□□ 0.36
CTSD-204ENST00000433655 RGS18Q9NS28 235 aa17.3■□□□□ 0.36
CTSD-204ENST00000433655 HS3ST4Q9Y661 456 aa17.3■□□□□ 0.36
CTSD-204ENST00000433655 PRR5-ARHGAP8B1AHC4 643 aa17.29■□□□□ 0.36
CTSD-204ENST00000433655 PSMD3O43242 534 aa17.29■□□□□ 0.36
CTSD-204ENST00000433655 HLA-DQB2P05538 268 aa17.29■□□□□ 0.36
CTSD-204ENST00000433655 C2P06681 752 aa17.29■□□□□ 0.36
CTSD-204ENST00000433655 RALBP11234 206 aa17.29■□□□□ 0.36
CTSD-204ENST00000433655 ADRA1AP35348 466 aa17.29■□□□□ 0.36
CTSD-204ENST00000433655 GPR15P49685 360 aa17.29■□□□□ 0.36
CTSD-204ENST00000433655 ABCE1P61221 599 aaKnown RBP17.29■□□□□ 0.36
CTSD-204ENST00000433655 ARHGAP8P85298 464 aa17.29■□□□□ 0.36
CTSD-204ENST00000433655 KHDC1Q4VXA5 237 aaKnown RBP17.29■□□□□ 0.36
CTSD-204ENST00000433655 LINC00523Q86TU6 105 aa17.29■□□□□ 0.36
CTSD-204ENST00000433655 WDR75Q8IWA0 830 aaKnown RBP17.29■□□□□ 0.36
CTSD-204ENST00000433655 KCNV2Q8TDN2 545 aa17.29■□□□□ 0.36
CTSD-204ENST00000433655 ZNF570Q96NI8 536 aa17.29■□□□□ 0.36
CTSD-204ENST00000433655 OXCT2Q9BYC2 517 aaPredicted RBP17.29■□□□□ 0.36
CTSD-204ENST00000433655 MMADHCQ9H3L0 296 aaPredicted RBP17.29■□□□□ 0.36
CTSD-204ENST00000433655 CATSPERBQ9H7T0 1116 aa17.29■□□□□ 0.36
CTSD-204ENST00000433655 PLA2G4CQ9UP65 541 aa17.29■□□□□ 0.36
CTSD-204ENST00000433655 AAR2Q9Y312 384 aaKnown RBP17.29■□□□□ 0.36
CTSD-204ENST00000433655 SQORQ9Y6N5 450 aa17.29■□□□□ 0.36
CTSD-204ENST00000433655 DOCK4Q8N1I0 1966 aa17.29■□□□□ 0.36
CTSD-204ENST00000433655 E9PAM4 449 aa17.28■□□□□ 0.36
CTSD-204ENST00000433655 MATN3O15232 486 aa17.28■□□□□ 0.36
CTSD-204ENST00000433655 TIMM44O43615 452 aa17.28■□□□□ 0.36
CTSD-204ENST00000433655 GABRB3P28472 473 aa17.28■□□□□ 0.36
CTSD-204ENST00000433655 GRM3Q14832 879 aa17.28■□□□□ 0.36
CTSD-204ENST00000433655 SDHAF4Q5VUM1 108 aa17.28■□□□□ 0.36
CTSD-204ENST00000433655 NAPRTQ6XQN6 538 aa17.28■□□□□ 0.36
CTSD-204ENST00000433655 ZC3HC1Q86WB0 502 aaKnown RBP17.28■□□□□ 0.36
CTSD-204ENST00000433655 LZTR1Q8N653 840 aa17.28■□□□□ 0.36
CTSD-204ENST00000433655 IPMKQ8NFU5 416 aa17.28■□□□□ 0.36
CTSD-204ENST00000433655 RILPQ96NA2 401 aa17.28■□□□□ 0.36
CTSD-204ENST00000433655 GPR22Q99680 433 aa17.28■□□□□ 0.36
CTSD-204ENST00000433655 STN1Q9H668 368 aaKnown RBP17.28■□□□□ 0.36
CTSD-204ENST00000433655 NOL6Q9H6R4 1146 aaKnown RBP17.28■□□□□ 0.36
CTSD-204ENST00000433655 ABI2Q9NYB9 513 aaPredicted RBP17.28■□□□□ 0.36
CTSD-204ENST00000433655 TAGLN3Q9UI15 199 aa17.28■□□□□ 0.36
CTSD-204ENST00000433655 NOD1Q9Y239 953 aa17.28■□□□□ 0.36
CTSD-204ENST00000433655 ARHGEF37A1IGU5 675 aa17.28■□□□□ 0.36
CTSD-204ENST00000433655 B2RBV5 119 aa17.28■□□□□ 0.36
CTSD-204ENST00000433655 AP3B1O00203 1094 aa17.28■□□□□ 0.36
CTSD-204ENST00000433655 OAZ2O95190 189 aa17.28■□□□□ 0.36
CTSD-204ENST00000433655 MOCS2O96007 188 aaPredicted RBP17.28■□□□□ 0.36
CTSD-204ENST00000433655 CKBP12277 381 aa17.28■□□□□ 0.36
CTSD-204ENST00000433655 DNAJB2P25686 324 aa17.28■□□□□ 0.36
CTSD-204ENST00000433655 ARNTP27540 789 aa17.28■□□□□ 0.36
CTSD-204ENST00000433655 TUBP50607 506 aa17.28■□□□□ 0.36
CTSD-204ENST00000433655 CDK7P50613 346 aa17.28■□□□□ 0.36
CTSD-204ENST00000433655 PGGT1BP53609 377 aa17.28■□□□□ 0.36
CTSD-204ENST00000433655 NRG1Q02297 640 aaPredicted RBP17.28■□□□□ 0.36
CTSD-204ENST00000433655 PIK3R6Q5UE93 754 aa17.28■□□□□ 0.36
CTSD-204ENST00000433655 PDPK2PQ6A1A2 396 aa17.28■□□□□ 0.36
CTSD-204ENST00000433655 PKN3Q6P5Z2 889 aa17.28■□□□□ 0.36
CTSD-204ENST00000433655 SCN4BQ8IWT1 228 aa17.28■□□□□ 0.36
CTSD-204ENST00000433655 COLGALT2Q8IYK4 626 aa17.28■□□□□ 0.36
CTSD-204ENST00000433655 RTL3Q8N8U3 475 aaKnown RBP17.28■□□□□ 0.36
CTSD-204ENST00000433655 RBM15BQ8NDT2 890 aaKnown RBP17.28■□□□□ 0.36
CTSD-204ENST00000433655 WDR60Q8WVS4 1066 aa17.28■□□□□ 0.36
CTSD-204ENST00000433655 TACO1Q9BSH4 297 aaKnown RBP17.28■□□□□ 0.36
CTSD-204ENST00000433655 FICDQ9BVA6 458 aa17.28■□□□□ 0.36
CTSD-204ENST00000433655 C1QTNF1Q9BXJ1 281 aa17.28■□□□□ 0.36
CTSD-204ENST00000433655 MPP6Q9NZW5 540 aa17.28■□□□□ 0.36
CTSD-204ENST00000433655 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.27■□□□□ 0.36
CTSD-204ENST00000433655 RPSAP08865 295 aaKnown RBP17.27■□□□□ 0.36
CTSD-204ENST00000433655 AOC1P19801 751 aa17.27■□□□□ 0.36
CTSD-204ENST00000433655 IDH3AP50213 366 aa17.27■□□□□ 0.36
CTSD-204ENST00000433655 RCN2Q14257 317 aa17.27■□□□□ 0.36
CTSD-204ENST00000433655 KPNB1Q14974 876 aaKnown RBP17.27■□□□□ 0.36
CTSD-204ENST00000433655 TBCCQ15814 346 aa17.27■□□□□ 0.36
CTSD-204ENST00000433655 ACSBG2Q5FVE4 666 aa17.27■□□□□ 0.36
CTSD-204ENST00000433655 PCID2Q5JVF3 399 aa17.27■□□□□ 0.36
CTSD-204ENST00000433655 CNTN4Q8IWV2 1026 aa17.27■□□□□ 0.36
CTSD-204ENST00000433655 ZNF683Q8IZ20 524 aa17.27■□□□□ 0.36
CTSD-204ENST00000433655 TMEM151AQ8N4L1 468 aa17.27■□□□□ 0.36
CTSD-204ENST00000433655 PCSK9Q8NBP7 692 aaKnown RBP17.27■□□□□ 0.36
CTSD-204ENST00000433655 SLC39A13Q96H72 371 aa17.27■□□□□ 0.36
CTSD-204ENST00000433655 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.27■□□□□ 0.361e-6■■□□□ 11.5
CTSD-204ENST00000433655 DNAJC28Q9NX36 388 aa17.27■□□□□ 0.36
CTSD-204ENST00000433655 PCDHB12Q9Y5F1 795 aa17.27■□□□□ 0.36
CTSD-204ENST00000433655 MIA3Q5JRA6 1907 aa17.26■□□□□ 0.35
CTSD-204ENST00000433655 H0Y3Z8 333 aa17.26■□□□□ 0.35
CTSD-204ENST00000433655 TMEM189-UBE2V1I3L0A0 370 aa17.26■□□□□ 0.35
CTSD-204ENST00000433655 ANXA9O76027 345 aa17.26■□□□□ 0.35
CTSD-204ENST00000433655 PEX11BO96011 259 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms