RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 ASIC2Q16515 512 aa3.65□□□□□ -1.83
CLK1-204ENST00000432425 FNBP1LQ5T0N5 605 aa3.65□□□□□ -1.83
CLK1-204ENST00000432425 HEPHL1Q6MZM0 1159 aa3.65□□□□□ -1.83
CLK1-204ENST00000432425 GALNT7Q86SF2 657 aa3.65□□□□□ -1.83
CLK1-204ENST00000432425 PALB2Q86YC2 1186 aa3.65□□□□□ -1.83
CLK1-204ENST00000432425 CACNA2D3Q8IZS8 1091 aa3.65□□□□□ -1.83
CLK1-204ENST00000432425 PRR26Q8N8Z3 221 aa3.65□□□□□ -1.83
CLK1-204ENST00000432425 SMRP1Q8NCR6 262 aa3.65□□□□□ -1.83
CLK1-204ENST00000432425 RUBCNQ92622 972 aa3.65□□□□□ -1.83
CLK1-204ENST00000432425 GOLGA1Q92805 767 aa3.65□□□□□ -1.83
CLK1-204ENST00000432425 CTAGE1Q96RT6 745 aa3.65□□□□□ -1.83
CLK1-204ENST00000432425 MPHOSPH6Q99547 160 aaKnown RBP3.65□□□□□ -1.83
CLK1-204ENST00000432425 DDX23Q9BUQ8 820 aaKnown RBP3.65□□□□□ -1.83
CLK1-204ENST00000432425 SLCO5A1Q9H2Y9 848 aa3.65□□□□□ -1.83
CLK1-204ENST00000432425 TAF1DQ9H5J8 278 aaPredicted RBP3.65□□□□□ -1.83
CLK1-204ENST00000432425 SLC22A11Q9NSA0 550 aa3.65□□□□□ -1.83
CLK1-204ENST00000432425 KLQ9UEF7 1012 aa3.65□□□□□ -1.83
CLK1-204ENST00000432425 CDH22Q9UJ99 828 aa3.65□□□□□ -1.83
CLK1-204ENST00000432425 PROCRQ9UNN8 238 aa3.65□□□□□ -1.83
CLK1-204ENST00000432425 E7EVH7 732 aa3.64□□□□□ -1.83
CLK1-204ENST00000432425 SEPT4O43236 478 aa3.64□□□□□ -1.83
CLK1-204ENST00000432425 LCATP04180 440 aa3.64□□□□□ -1.83
CLK1-204ENST00000432425 CYP21A2P08686 494 aa3.64□□□□□ -1.83
CLK1-204ENST00000432425 UNGP13051 313 aaPredicted RBP3.64□□□□□ -1.83
CLK1-204ENST00000432425 PLA2G2AP14555 144 aa3.64□□□□□ -1.83
CLK1-204ENST00000432425 CHN1P15882 459 aa3.64□□□□□ -1.83
CLK1-204ENST00000432425 PCYT1AP49585 367 aa3.64□□□□□ -1.83
CLK1-204ENST00000432425 FOXO1Q12778 655 aa3.64□□□□□ -1.83
CLK1-204ENST00000432425 TRAF1Q13077 416 aa3.64□□□□□ -1.83
CLK1-204ENST00000432425 TRIM14Q14142 442 aa3.64□□□□□ -1.83
CLK1-204ENST00000432425 DUSP6Q16828 381 aa3.64□□□□□ -1.83
CLK1-204ENST00000432425 LRRC24Q50LG9 513 aa3.64□□□□□ -1.83
CLK1-204ENST00000432425 INO80DQ53TQ3 878 aaPredicted RBP3.64□□□□□ -1.83
CLK1-204ENST00000432425 RUNDC3AQ59EK9 446 aa3.64□□□□□ -1.83
CLK1-204ENST00000432425 FSCBQ5H9T9 825 aa3.64□□□□□ -1.83
CLK1-204ENST00000432425 TMEM268Q5VZI3 342 aa3.64□□□□□ -1.83
CLK1-204ENST00000432425 AADACL2Q6P093 401 aa3.64□□□□□ -1.83
CLK1-204ENST00000432425 SYT13Q7L8C5 426 aa3.64□□□□□ -1.83
CLK1-204ENST00000432425 SPICE1Q8N0Z3 855 aa3.64□□□□□ -1.83
CLK1-204ENST00000432425 SAMD3Q8N6K7 520 aa3.64□□□□□ -1.83
CLK1-204ENST00000432425 OR6Y1Q8NGX8 325 aa3.64□□□□□ -1.83
CLK1-204ENST00000432425 C2CD4CQ8TF44 421 aa3.64□□□□□ -1.83
CLK1-204ENST00000432425 FAR1Q8WVX9 515 aa3.64□□□□□ -1.83
CLK1-204ENST00000432425 PHF21BQ96EK2 531 aa3.64□□□□□ -1.83
CLK1-204ENST00000432425 ACAD9Q9H845 621 aa3.64□□□□□ -1.83
CLK1-204ENST00000432425 PLEKHB1Q9UF11 243 aaPredicted RBP3.64□□□□□ -1.83
CLK1-204ENST00000432425 C17orf102A2RUQ5 167 aa3.63□□□□□ -1.83
CLK1-204ENST00000432425 FAM90A20PA6NIJ5 464 aa3.63□□□□□ -1.83
CLK1-204ENST00000432425 PRR23D1E9PI22 279 aaPredicted RBP3.63□□□□□ -1.83
CLK1-204ENST00000432425 VWA5AO00534 786 aa3.63□□□□□ -1.83
CLK1-204ENST00000432425 LIASO43766 372 aa3.63□□□□□ -1.83
CLK1-204ENST00000432425 KRT38O76015 456 aa3.63□□□□□ -1.83
CLK1-204ENST00000432425 MYZAPP0CAP1 466 aa3.63□□□□□ -1.83
CLK1-204ENST00000432425 PRR23D2P0DMB1 279 aaPredicted RBP3.63□□□□□ -1.83
CLK1-204ENST00000432425 SKIV2L2P42285 1042 aaKnown RBP3.63□□□□□ -1.83
CLK1-204ENST00000432425 PPP3CCP48454 512 aa3.63□□□□□ -1.83
CLK1-204ENST00000432425 MCM2P49736 904 aa3.63□□□□□ -1.83
CLK1-204ENST00000432425 CLCNKBP51801 687 aa3.63□□□□□ -1.83
CLK1-204ENST00000432425 RBM5P52756 815 aaKnown RBP eCLIP3.63□□□□□ -1.83
CLK1-204ENST00000432425 CRYZQ08257 329 aaKnown RBP3.63□□□□□ -1.83
CLK1-204ENST00000432425 DSC1Q08554 894 aa3.63□□□□□ -1.83
CLK1-204ENST00000432425 MORC3Q14149 939 aa3.63□□□□□ -1.83
CLK1-204ENST00000432425 TIGD6Q17RP2 521 aa3.63□□□□□ -1.83
CLK1-204ENST00000432425 ZNF324BQ6AW86 544 aaPredicted RBP3.63□□□□□ -1.83
CLK1-204ENST00000432425 TMEM71Q6P5X7 295 aa3.63□□□□□ -1.83
CLK1-204ENST00000432425 BRSK2Q8IWQ3 736 aa3.63□□□□□ -1.83
CLK1-204ENST00000432425 NUDCD2Q8WVJ2 157 aa3.63□□□□□ -1.83
CLK1-204ENST00000432425 APOLD1Q96LR9 279 aa3.63□□□□□ -1.83
CLK1-204ENST00000432425 TEFMQ96QE5 360 aaKnown RBP3.63□□□□□ -1.83
CLK1-204ENST00000432425 KLHL31Q9H511 634 aa3.63□□□□□ -1.83
CLK1-204ENST00000432425 THAP1Q9NVV9 213 aa3.63□□□□□ -1.83
CLK1-204ENST00000432425 GRHPRQ9UBQ7 328 aa3.63□□□□□ -1.83
CLK1-204ENST00000432425 UPB1Q9UBR1 384 aa3.63□□□□□ -1.83
CLK1-204ENST00000432425 TAGLN3Q9UI15 199 aa3.63□□□□□ -1.83
CLK1-204ENST00000432425 DHDHQ9UQ10 334 aa3.63□□□□□ -1.83
CLK1-204ENST00000432425 DOCK7Q96N67 2140 aa3.63□□□□□ -1.83
CLK1-204ENST00000432425 EME2A4GXA9 379 aaPredicted RBP3.62□□□□□ -1.83
CLK1-204ENST00000432425 PRSS44E7EML9 344 aa3.62□□□□□ -1.83
CLK1-204ENST00000432425 I6L893 689 aaPredicted RBP3.62□□□□□ -1.83
CLK1-204ENST00000432425 ACOT8O14734 319 aa3.62□□□□□ -1.83
CLK1-204ENST00000432425 RNMTO43148 476 aaKnown RBP3.62□□□□□ -1.83
CLK1-204ENST00000432425 STRNO43815 780 aa3.62□□□□□ -1.83
CLK1-204ENST00000432425 DDAH2O95865 285 aa3.62□□□□□ -1.83
CLK1-204ENST00000432425 TFRCP02786 760 aaKnown RBP3.62□□□□□ -1.83
CLK1-204ENST00000432425 ACP5P13686 325 aa3.62□□□□□ -1.83
CLK1-204ENST00000432425 Q0VFX4 171 aa3.62□□□□□ -1.83
CLK1-204ENST00000432425 SMAD1Q15797 465 aaKnown RBP3.62□□□□□ -1.83
CLK1-204ENST00000432425 CAPRIN2Q6IMN6 1127 aaKnown RBP3.62□□□□□ -1.83
CLK1-204ENST00000432425 Q6ZSV7 163 aa3.62□□□□□ -1.83
CLK1-204ENST00000432425 ZNF367Q7RTV3 350 aa3.62□□□□□ -1.83
CLK1-204ENST00000432425 WDR5BQ86VZ2 330 aa3.62□□□□□ -1.83
CLK1-204ENST00000432425 CEP76Q8TAP6 659 aa3.62□□□□□ -1.83
CLK1-204ENST00000432425 HDAC7Q8WUI4 952 aa3.62□□□□□ -1.83
CLK1-204ENST00000432425 SLC35F5Q8WV83 523 aa3.62□□□□□ -1.83
CLK1-204ENST00000432425 PAGR1Q9BTK6 254 aa3.62□□□□□ -1.83
CLK1-204ENST00000432425 PLEKHA2Q9HB19 425 aa3.62□□□□□ -1.83
CLK1-204ENST00000432425 SAYSD1Q9NPB0 183 aa3.62□□□□□ -1.83
CLK1-204ENST00000432425 CD93Q9NPY3 652 aa3.62□□□□□ -1.83
CLK1-204ENST00000432425 SRPRBQ9Y5M8 271 aaKnown RBP3.62□□□□□ -1.83
CLK1-204ENST00000432425 MST1RQ04912 1400 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms