RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 CFHR1Q03591 330 aa3.39□□□□□ -1.87
HMGB1P27-201ENST00000431429 PGM5Q15124 567 aa3.39□□□□□ -1.87
HMGB1P27-201ENST00000431429 OLFML1Q6UWY5 402 aa3.39□□□□□ -1.87
HMGB1P27-201ENST00000431429 DHRS13Q6UX07 377 aa3.39□□□□□ -1.87
HMGB1P27-201ENST00000431429 ATF7IPQ6VMQ6 1270 aa3.39□□□□□ -1.87
HMGB1P27-201ENST00000431429 ZNF813Q6ZN06 617 aa3.39□□□□□ -1.87
HMGB1P27-201ENST00000431429 UBE2Q1Q7Z7E8 422 aa3.39□□□□□ -1.87
HMGB1P27-201ENST00000431429 KLBQ86Z14 1044 aa3.39□□□□□ -1.87
HMGB1P27-201ENST00000431429 CPXM2Q8N436 756 aa3.39□□□□□ -1.87
HMGB1P27-201ENST00000431429 ARL14EPQ8N8R7 260 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P27-201ENST00000431429 C8orf58Q8NAV2 365 aa3.39□□□□□ -1.87
HMGB1P27-201ENST00000431429 ETNPPLQ8TBG4 499 aa3.39□□□□□ -1.87
HMGB1P27-201ENST00000431429 KCNG4Q8TDN1 519 aa3.39□□□□□ -1.87
HMGB1P27-201ENST00000431429 IP6K1Q92551 441 aa3.39□□□□□ -1.87
HMGB1P27-201ENST00000431429 USP6NLQ92738 828 aa3.39□□□□□ -1.87
HMGB1P27-201ENST00000431429 KAT2AQ92830 837 aa3.39□□□□□ -1.87
HMGB1P27-201ENST00000431429 ERP27Q96DN0 273 aa3.39□□□□□ -1.87
HMGB1P27-201ENST00000431429 ZNF764Q96H86 408 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P27-201ENST00000431429 MPHOSPH8Q99549 860 aa3.39□□□□□ -1.87
HMGB1P27-201ENST00000431429 STRA6Q9BX79 667 aa3.39□□□□□ -1.87
HMGB1P27-201ENST00000431429 TMX4Q9H1E5 349 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P27-201ENST00000431429 SCPEP1Q9HB40 452 aa3.39□□□□□ -1.87
HMGB1P27-201ENST00000431429 VEZTQ9HBM0 779 aa3.39□□□□□ -1.87
HMGB1P27-201ENST00000431429 IL17RBQ9NRM6 502 aa3.39□□□□□ -1.87
HMGB1P27-201ENST00000431429 PLSCR4Q9NRQ2 329 aa3.39□□□□□ -1.87
HMGB1P27-201ENST00000431429 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.39□□□□□ -1.87
HMGB1P27-201ENST00000431429 GRHL1Q9NZI5 618 aa3.39□□□□□ -1.87
HMGB1P27-201ENST00000431429 NCKIPSDQ9NZQ3 722 aa3.39□□□□□ -1.87
HMGB1P27-201ENST00000431429 SH3BP4Q9P0V3 963 aa3.39□□□□□ -1.87
HMGB1P27-201ENST00000431429 NLKQ9UBE8 527 aa3.39□□□□□ -1.87
HMGB1P27-201ENST00000431429 TBC1D29Q9UFV1 150 aa3.39□□□□□ -1.87
HMGB1P27-201ENST00000431429 SLC25A13Q9UJS0 675 aa3.39□□□□□ -1.87
HMGB1P27-201ENST00000431429 ADGRF5Q8IZF2 1346 aa3.39□□□□□ -1.87
HMGB1P27-201ENST00000431429 TCRBV7S3A2A0A539 114 aa3.38□□□□□ -1.87
HMGB1P27-201ENST00000431429 DYTNA2CJ06 578 aa3.38□□□□□ -1.87
HMGB1P27-201ENST00000431429 WIPF3A6NGB9 483 aa3.38□□□□□ -1.87
HMGB1P27-201ENST00000431429 AHCYL1O43865 530 aa3.38□□□□□ -1.87
HMGB1P27-201ENST00000431429 NEURL1O76050 574 aa3.38□□□□□ -1.87
HMGB1P27-201ENST00000431429 SEC14L2O76054 403 aa3.38□□□□□ -1.87
HMGB1P27-201ENST00000431429 HEXAP06865 529 aa3.38□□□□□ -1.87
HMGB1P27-201ENST00000431429 HSPA1AP0DMV8 641 aaKnown RBP3.38□□□□□ -1.87
HMGB1P27-201ENST00000431429 HSPA1BP0DMV9 641 aaKnown RBP3.38□□□□□ -1.87
HMGB1P27-201ENST00000431429 ST6GAL1P15907 406 aa3.38□□□□□ -1.87
HMGB1P27-201ENST00000431429 ALOX12P18054 663 aa3.38□□□□□ -1.87
HMGB1P27-201ENST00000431429 CDH2P19022 906 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P27-201ENST00000431429 GPD1P21695 349 aa3.38□□□□□ -1.87
HMGB1P27-201ENST00000431429 CD72P21854 359 aa3.38□□□□□ -1.87
HMGB1P27-201ENST00000431429 TACR3P29371 465 aa3.38□□□□□ -1.87
HMGB1P27-201ENST00000431429 CPOXP36551 454 aa3.38□□□□□ -1.87
HMGB1P27-201ENST00000431429 ACVRL1P37023 503 aa3.38□□□□□ -1.87
HMGB1P27-201ENST00000431429 RAD52P43351 418 aa3.38□□□□□ -1.87
HMGB1P27-201ENST00000431429 EIF3BP55884 814 aaKnown RBP3.38□□□□□ -1.87
HMGB1P27-201ENST00000431429 PROK1P58294 105 aa3.38□□□□□ -1.87
HMGB1P27-201ENST00000431429 CYP4A11Q02928 519 aa3.38□□□□□ -1.87
HMGB1P27-201ENST00000431429 ACVR2BQ13705 512 aa3.38□□□□□ -1.87
HMGB1P27-201ENST00000431429 TOMM20Q15388 145 aa3.38□□□□□ -1.87
HMGB1P27-201ENST00000431429 PFKFB3Q16875 520 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P27-201ENST00000431429 C5orf22Q49AR2 442 aa3.38□□□□□ -1.87
HMGB1P27-201ENST00000431429 C10orf76Q5T2E6 689 aa3.38□□□□□ -1.87
HMGB1P27-201ENST00000431429 ASPHD1Q5U4P2 390 aa3.38□□□□□ -1.87
HMGB1P27-201ENST00000431429 MEX3CQ5U5Q3 659 aaKnown RBP3.38□□□□□ -1.87
HMGB1P27-201ENST00000431429 TXNDC8Q6A555 127 aa3.38□□□□□ -1.87
HMGB1P27-201ENST00000431429 SERPINA13PQ6UXR4 307 aa3.38□□□□□ -1.87
HMGB1P27-201ENST00000431429 GALNT5Q7Z7M9 940 aa3.38□□□□□ -1.87
HMGB1P27-201ENST00000431429 AMIGO2Q86SJ2 522 aa3.38□□□□□ -1.87
HMGB1P27-201ENST00000431429 TRIM74Q86UV6 250 aa3.38□□□□□ -1.87
HMGB1P27-201ENST00000431429 TRIM73Q86UV7 250 aa3.38□□□□□ -1.87
HMGB1P27-201ENST00000431429 CCDC105Q8IYK2 499 aa3.38□□□□□ -1.87
HMGB1P27-201ENST00000431429 TMEM217Q8N7C4 229 aa3.38□□□□□ -1.87
HMGB1P27-201ENST00000431429 CCDC89Q8N998 374 aa3.38□□□□□ -1.87
HMGB1P27-201ENST00000431429 FAM47BQ8NA70 645 aa3.38□□□□□ -1.87
HMGB1P27-201ENST00000431429 C11orf65Q8NCR3 313 aa3.38□□□□□ -1.87
HMGB1P27-201ENST00000431429 OR4N2Q8NGD1 307 aa3.38□□□□□ -1.87
HMGB1P27-201ENST00000431429 NEK9Q8TD19 979 aa3.38□□□□□ -1.87
HMGB1P27-201ENST00000431429 HSPH1Q92598 858 aa3.38□□□□□ -1.87
HMGB1P27-201ENST00000431429 KLHL29Q96CT2 875 aa3.38□□□□□ -1.87
HMGB1P27-201ENST00000431429 SAAL1Q96ER3 474 aa3.38□□□□□ -1.87
HMGB1P27-201ENST00000431429 TEFMQ96QE5 360 aaKnown RBP3.38□□□□□ -1.87
HMGB1P27-201ENST00000431429 MAP7D2Q96T17 732 aa3.38□□□□□ -1.87
HMGB1P27-201ENST00000431429 PIP5K1AQ99755 562 aa3.38□□□□□ -1.87
HMGB1P27-201ENST00000431429 PIMREGQ9BSJ6 248 aa3.38□□□□□ -1.87
HMGB1P27-201ENST00000431429 DUSP26Q9BV47 211 aa3.38□□□□□ -1.87
HMGB1P27-201ENST00000431429 KRTAP9-9Q9BYP9 154 aa3.38□□□□□ -1.87
HMGB1P27-201ENST00000431429 KRTAP9-4Q9BYQ2 154 aa3.38□□□□□ -1.87
HMGB1P27-201ENST00000431429 PDCL3Q9H2J4 239 aa3.38□□□□□ -1.87
HMGB1P27-201ENST00000431429 KRT84Q9NSB2 600 aa3.38□□□□□ -1.87
HMGB1P27-201ENST00000431429 C20orf141Q9NUB4 165 aa3.38□□□□□ -1.87
HMGB1P27-201ENST00000431429 ARL8BQ9NVJ2 186 aa3.38□□□□□ -1.87
HMGB1P27-201ENST00000431429 ASB6Q9NWX5 421 aa3.38□□□□□ -1.87
HMGB1P27-201ENST00000431429 KIAA1456Q9P272 454 aa3.38□□□□□ -1.87
HMGB1P27-201ENST00000431429 PEMTQ9UBM1 199 aa3.38□□□□□ -1.87
HMGB1P27-201ENST00000431429 POLG2Q9UHN1 485 aa3.38□□□□□ -1.87
HMGB1P27-201ENST00000431429 CDH22Q9UJ99 828 aa3.38□□□□□ -1.87
HMGB1P27-201ENST00000431429 TLK1Q9UKI8 766 aa3.38□□□□□ -1.87
HMGB1P27-201ENST00000431429 FBXO4Q9UKT5 387 aa3.38□□□□□ -1.87
HMGB1P27-201ENST00000431429 RABGAP1Q9Y3P9 1069 aa3.38□□□□□ -1.87
HMGB1P27-201ENST00000431429 LAS1LQ9Y4W2 734 aaKnown RBP3.38□□□□□ -1.87
HMGB1P27-201ENST00000431429 WNT6Q9Y6F9 365 aa3.38□□□□□ -1.87
HMGB1P27-201ENST00000431429 ARHGEF17Q96PE2 2063 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P27-201ENST00000431429 RSF1Q96T23 1441 aaPredicted RBP3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms