RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 SPOCD1Q6ZMY3 1216 aa15.27■□□□□ 0.04
GARNL3-204ENST00000429629 NPWQ8N729 165 aa15.27■□□□□ 0.04
GARNL3-204ENST00000429629 KRT35Q92764 455 aa15.27■□□□□ 0.04
GARNL3-204ENST00000429629 ETNK2Q9NVF9 386 aa15.27■□□□□ 0.04
GARNL3-204ENST00000429629 WASH3PC4AMC7 463 aa15.26■□□□□ 0.03
GARNL3-204ENST00000429629 ALOX15BO15296 676 aa15.26■□□□□ 0.03
GARNL3-204ENST00000429629 MT-CO1P00395 513 aa15.26■□□□□ 0.03
GARNL3-204ENST00000429629 EPHX1P07099 455 aa15.26■□□□□ 0.03
GARNL3-204ENST00000429629 SRCP12931 536 aa15.26■□□□□ 0.03
GARNL3-204ENST00000429629 PRKCHP24723 683 aa15.26■□□□□ 0.03
GARNL3-204ENST00000429629 MSNP26038 577 aaKnown RBP15.26■□□□□ 0.03
GARNL3-204ENST00000429629 CNR2P34972 360 aa15.26■□□□□ 0.03
GARNL3-204ENST00000429629 IL10RBQ08334 325 aa15.26■□□□□ 0.03
GARNL3-204ENST00000429629 GALNT2Q10471 571 aa15.26■□□□□ 0.03
GARNL3-204ENST00000429629 ANGPT1Q15389 498 aa15.26■□□□□ 0.03
GARNL3-204ENST00000429629 DLG2Q15700 870 aa15.26■□□□□ 0.03
GARNL3-204ENST00000429629 HS1BP3Q53T59 392 aa15.26■□□□□ 0.03
GARNL3-204ENST00000429629 C9orf64Q5T6V5 341 aa15.26■□□□□ 0.03
GARNL3-204ENST00000429629 MEI1Q5TIA1 1274 aa15.26■□□□□ 0.03
GARNL3-204ENST00000429629 NCBP2-AS2Q69YL0 99 aa15.26■□□□□ 0.03
GARNL3-204ENST00000429629 PCDH20Q8N6Y1 951 aaKnown RBP15.26■□□□□ 0.03
GARNL3-204ENST00000429629 PLD5Q8N7P1 536 aa15.26■□□□□ 0.03
GARNL3-204ENST00000429629 ATP11CQ8NB49 1132 aa15.26■□□□□ 0.03
GARNL3-204ENST00000429629 OR2T3Q8NH03 318 aa15.26■□□□□ 0.03
GARNL3-204ENST00000429629 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.26■□□□□ 0.03
GARNL3-204ENST00000429629 RNF25Q96BH1 459 aaPredicted RBP15.26■□□□□ 0.03
GARNL3-204ENST00000429629 RPL10LQ96L21 214 aaKnown RBP15.26■□□□□ 0.03
GARNL3-204ENST00000429629 PDFQ9HBH1 243 aa15.26■□□□□ 0.03
GARNL3-204ENST00000429629 PRSS16Q9NQE7 514 aa15.26■□□□□ 0.03
GARNL3-204ENST00000429629 IPO11Q9UI26 975 aaKnown RBP15.26■□□□□ 0.03
GARNL3-204ENST00000429629 SCML1Q9UN30 329 aa15.26■□□□□ 0.03
GARNL3-204ENST00000429629 hCG_1818297A0A087WSY0 165 aa15.25■□□□□ 0.03
GARNL3-204ENST00000429629 APOL1O14791 398 aa15.25■□□□□ 0.03
GARNL3-204ENST00000429629 MCF2LO15068 1137 aa15.25■□□□□ 0.03
GARNL3-204ENST00000429629 DDX3YO15523 660 aaKnown RBP15.25■□□□□ 0.03
GARNL3-204ENST00000429629 TGM2P21980 687 aa15.25■□□□□ 0.03
GARNL3-204ENST00000429629 CCNCP24863 283 aa15.25■□□□□ 0.03
GARNL3-204ENST00000429629 NSUN2Q08J23 767 aaKnown RBP eCLIP15.25■□□□□ 0.03
GARNL3-204ENST00000429629 SFSWAPQ12872 951 aaKnown RBP15.25■□□□□ 0.03
GARNL3-204ENST00000429629 ELAVL3Q14576 367 aaKnown RBP15.25■□□□□ 0.03
GARNL3-204ENST00000429629 RPS6KA1Q15418 735 aa15.25■□□□□ 0.03
GARNL3-204ENST00000429629 TSTD1Q8NFU3 115 aa15.25■□□□□ 0.03
GARNL3-204ENST00000429629 ALG3Q92685 438 aa15.25■□□□□ 0.03
GARNL3-204ENST00000429629 PTPRN2Q92932 1015 aa15.25■□□□□ 0.03
GARNL3-204ENST00000429629 CCDC114Q96M63 670 aa15.25■□□□□ 0.03
GARNL3-204ENST00000429629 KLHL11Q9NVR0 708 aa15.25■□□□□ 0.03
GARNL3-204ENST00000429629 C2orf42Q9NWW7 574 aa15.25■□□□□ 0.03
GARNL3-204ENST00000429629 DTLQ9NZJ0 730 aa15.25■□□□□ 0.03
GARNL3-204ENST00000429629 AMACRQ9UHK6 382 aa15.25■□□□□ 0.03
GARNL3-204ENST00000429629 JRKLQ9Y4A0 524 aa15.25■□□□□ 0.03
GARNL3-204ENST00000429629 FARP1Q9Y4F1 1045 aaPredicted RBP15.25■□□□□ 0.03
GARNL3-204ENST00000429629 TTC34A8MYJ7 566 aa15.24■□□□□ 0.03
GARNL3-204ENST00000429629 MAFKO60675 156 aa15.24■□□□□ 0.03
GARNL3-204ENST00000429629 ZNF821O75541 412 aaPredicted RBP15.24■□□□□ 0.03
GARNL3-204ENST00000429629 ZNF189O75820 626 aaPredicted RBP15.24■□□□□ 0.03
GARNL3-204ENST00000429629 FTCDO95954 541 aa15.24■□□□□ 0.03
GARNL3-204ENST00000429629 SP9P0CG40 484 aa15.24■□□□□ 0.03
GARNL3-204ENST00000429629 TNNT1P13805 278 aa15.24■□□□□ 0.03
GARNL3-204ENST00000429629 GLDCP23378 1020 aa15.24■□□□□ 0.03
GARNL3-204ENST00000429629 CSNK1DP48730 415 aa15.24■□□□□ 0.03
GARNL3-204ENST00000429629 MARCKSL1P49006 195 aa15.24■□□□□ 0.03
GARNL3-204ENST00000429629 STK19P49842 368 aaPredicted RBP15.24■□□□□ 0.03
GARNL3-204ENST00000429629 CSTF1Q05048 431 aaKnown RBP15.24■□□□□ 0.03
GARNL3-204ENST00000429629 BYSLQ13895 437 aaKnown RBP15.24■□□□□ 0.03
GARNL3-204ENST00000429629 HNRNPDQ14103 355 aaKnown RBP15.24■□□□□ 0.03
GARNL3-204ENST00000429629 KIAA1211LQ6NV74 962 aa15.24■□□□□ 0.03
GARNL3-204ENST00000429629 BBS12Q6ZW61 710 aa15.24■□□□□ 0.03
GARNL3-204ENST00000429629 DSG4Q86SJ6 1040 aa15.24■□□□□ 0.03
GARNL3-204ENST00000429629 WDR5BQ86VZ2 330 aa15.24■□□□□ 0.03
GARNL3-204ENST00000429629 LONP2Q86WA8 852 aa15.24■□□□□ 0.03
GARNL3-204ENST00000429629 ZBTB44Q8NCP5 570 aa15.24■□□□□ 0.03
GARNL3-204ENST00000429629 CELF6Q96J87 481 aaKnown RBP15.24■□□□□ 0.03
GARNL3-204ENST00000429629 LRIG1Q96JA1 1093 aa15.24■□□□□ 0.03
GARNL3-204ENST00000429629 OSBPL8Q9BZF1 889 aa15.24■□□□□ 0.03
GARNL3-204ENST00000429629 RSPH9Q9H1X1 276 aaPredicted RBP15.24■□□□□ 0.03
GARNL3-204ENST00000429629 CARD9Q9H257 536 aa15.24■□□□□ 0.03
GARNL3-204ENST00000429629 ZSCAN32Q9NX65 697 aa15.24■□□□□ 0.03
GARNL3-204ENST00000429629 UBA2Q9UBT2 640 aaPredicted RBP15.24■□□□□ 0.03
GARNL3-204ENST00000429629 PCDHGA2Q9Y5H1 932 aa15.24■□□□□ 0.03
GARNL3-204ENST00000429629 MYOFQ9NZM1 2061 aa15.24■□□□□ 0.03
GARNL3-204ENST00000429629 KIAA1549LQ6ZVL6 1849 aa15.24■□□□□ 0.03
GARNL3-204ENST00000429629 J3KR12 359 aa15.23■□□□□ 0.03
GARNL3-204ENST00000429629 DFFAO00273 331 aa15.23■□□□□ 0.03
GARNL3-204ENST00000429629 MATN3O15232 486 aa15.23■□□□□ 0.03
GARNL3-204ENST00000429629 SMAD6O43541 496 aaKnown RBP15.23■□□□□ 0.03
GARNL3-204ENST00000429629 KIF5CO60282 957 aa15.23■□□□□ 0.03
GARNL3-204ENST00000429629 CST8O60676 142 aa15.23■□□□□ 0.03
GARNL3-204ENST00000429629 RNASEH1O60930 286 aaKnown RBP15.23■□□□□ 0.03
GARNL3-204ENST00000429629 ZNF217O75362 1048 aa15.23■□□□□ 0.03
GARNL3-204ENST00000429629 TJP3O95049 919 aa15.23■□□□□ 0.03
GARNL3-204ENST00000429629 GSRP00390 522 aa15.23■□□□□ 0.03
GARNL3-204ENST00000429629 PYGMP11217 842 aa15.23■□□□□ 0.03
GARNL3-204ENST00000429629 COL9A1P20849 921 aa15.23■□□□□ 0.03
GARNL3-204ENST00000429629 HSPA9P38646 679 aaKnown RBP15.23■□□□□ 0.03
GARNL3-204ENST00000429629 GARSP41250 739 aaKnown RBP15.23■□□□□ 0.03
GARNL3-204ENST00000429629 WASP42768 502 aa15.23■□□□□ 0.03
GARNL3-204ENST00000429629 RENBPP51606 427 aa15.23■□□□□ 0.03
GARNL3-204ENST00000429629 COPAP53621 1224 aa15.23■□□□□ 0.03
GARNL3-204ENST00000429629 SLC10A2Q12908 348 aaPredicted RBP15.23■□□□□ 0.03
GARNL3-204ENST00000429629 PDK1Q15118 436 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms