RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 ZFP90Q8TF47 636 aa9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 SLC7A3Q8WY07 619 aa9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 NXPE3Q969Y0 559 aa9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 CIDECQ96AQ7 238 aaPredicted RBP9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 HEXIM2Q96MH2 286 aaKnown RBP9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 RIPOR3Q96MK2 946 aa9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 BCL7BQ9BQE9 202 aa9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 DDX28Q9NUL7 540 aaKnown RBP9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 ACOXLQ9NUZ1 547 aa9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 FAM205AQ6ZU69 1335 aa9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 A0A0G2JMP0 313 aa9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 DENND3A2RUS2 1198 aa9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 SAGE2PA6NJ88 616 aa9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 EXTL3O43909 919 aa9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 ENTPD3O75355 529 aa9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 HLA-DRAP01903 254 aa9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 IFNA16P05015 189 aa9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 MBL2P11226 248 aaPredicted RBP9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 XRCC1P18887 633 aaPredicted RBP9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 HIBADHP31937 336 aaKnown RBP9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 TRIM23P36406 574 aa9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 DDOSTP39656 456 aa9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 RGS7P49802 495 aa9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 ST13P50502 369 aaKnown RBP9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 NDST1P52848 882 aa9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 RUNX1T1Q06455 604 aa9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 GRB10Q13322 594 aa9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 FASTKD3Q14CZ7 662 aaKnown RBP9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 ACAP2Q15057 778 aa9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 LDLRAP1Q5SW96 308 aa9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 IRAK1BP1Q5VVH5 260 aa9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 TTBK2Q6IQ55 1244 aa9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 ZNF704Q6ZNC4 412 aaPredicted RBP9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 ATG14Q6ZNE5 492 aa9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 APPL2Q8NEU8 664 aa9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 PIWIL2Q8TC59 973 aaKnown RBP9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 LRRC20Q8TCA0 184 aa9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 ATG4AQ8WYN0 398 aa9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 MRRFQ96E11 262 aaKnown RBP9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 C8orf37Q96NL8 207 aa9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 IL12RB2Q99665 862 aa9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 SENP7Q9BQF6 1050 aa9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 FBXO28Q9NVF7 368 aa9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 ADPRHL2Q9NX46 363 aa9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 TAS2R14Q9NYV8 317 aa9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 ACTR3BQ9P1U1 418 aa9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 GMEB2Q9UKD1 530 aa9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 ACAD8Q9UKU7 415 aa9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 DIMT1Q9UNQ2 313 aaKnown RBP9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 JAG2Q9Y219 1238 aa9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 ZNF175Q9Y473 711 aa9.01□□□□□ -0.97
CDC42BPA-206ENST00000429440 A0A0X1KG70 313 aa9□□□□□ -0.97
CDC42BPA-206ENST00000429440 PHGDHO43175 533 aaKnown RBP9□□□□□ -0.97
CDC42BPA-206ENST00000429440 UGT2B11O75310 529 aa9□□□□□ -0.97
CDC42BPA-206ENST00000429440 SERPINB2P05120 415 aa9□□□□□ -0.97
CDC42BPA-206ENST00000429440 C7P10643 843 aa9□□□□□ -0.97
CDC42BPA-206ENST00000429440 ME2P23368 584 aa9□□□□□ -0.97
CDC42BPA-206ENST00000429440 RPL9P32969 192 aaKnown RBP9□□□□□ -0.97
CDC42BPA-206ENST00000429440 MAPKAPK2P49137 400 aa9□□□□□ -0.97
CDC42BPA-206ENST00000429440 GPX6P59796 221 aa9□□□□□ -0.97
CDC42BPA-206ENST00000429440 ORC2Q13416 577 aaPredicted RBP9□□□□□ -0.97
CDC42BPA-206ENST00000429440 BFSP2Q13515 415 aa9□□□□□ -0.97
CDC42BPA-206ENST00000429440 CARTPTQ16568 116 aa9□□□□□ -0.97
CDC42BPA-206ENST00000429440 ZNF181Q2M3W8 571 aa9□□□□□ -0.97
CDC42BPA-206ENST00000429440 IFIT1BQ5T764 474 aaKnown RBP9□□□□□ -0.97
CDC42BPA-206ENST00000429440 RNASEH2BQ5TBB1 312 aaKnown RBP9□□□□□ -0.97
CDC42BPA-206ENST00000429440 LLGL2Q6P1M3 1020 aa9□□□□□ -0.97
CDC42BPA-206ENST00000429440 HORMAD1Q86X24 394 aa9□□□□□ -0.97
CDC42BPA-206ENST00000429440 WDR49Q8IV35 697 aa9□□□□□ -0.97
CDC42BPA-206ENST00000429440 CHCHD4Q8N4Q1 142 aa9□□□□□ -0.97
CDC42BPA-206ENST00000429440 DAGLBQ8NCG7 672 aa9□□□□□ -0.97
CDC42BPA-206ENST00000429440 SNX19Q92543 992 aa9□□□□□ -0.97
CDC42BPA-206ENST00000429440 DUS3LQ96G46 650 aaKnown RBP9□□□□□ -0.97
CDC42BPA-206ENST00000429440 CSF3RQ99062 836 aa9□□□□□ -0.97
CDC42BPA-206ENST00000429440 KLF6Q99612 283 aaPredicted RBP9□□□□□ -0.97
CDC42BPA-206ENST00000429440 BEGAINQ9BUH8 593 aa9□□□□□ -0.97
CDC42BPA-206ENST00000429440 HEMGNQ9BXL5 484 aa9□□□□□ -0.97
CDC42BPA-206ENST00000429440 IDI2Q9BXS1 227 aa9□□□□□ -0.97
CDC42BPA-206ENST00000429440 ADAM33Q9BZ11 813 aa9□□□□□ -0.97
CDC42BPA-206ENST00000429440 ERVMER34-1Q9H9K5 563 aa9□□□□□ -0.97
CDC42BPA-206ENST00000429440 MCM9Q9NXL9 1143 aa9□□□□□ -0.97
CDC42BPA-206ENST00000429440 GCNT4Q9P109 453 aa9□□□□□ -0.97
CDC42BPA-206ENST00000429440 MKL2Q9ULH7 1088 aa9□□□□□ -0.97
CDC42BPA-206ENST00000429440 SHOC2Q9UQ13 582 aa9□□□□□ -0.97
CDC42BPA-206ENST00000429440 PLLPQ9Y342 182 aa9□□□□□ -0.97
CDC42BPA-206ENST00000429440 CLRN2A0PK11 232 aa9□□□□□ -0.97
CDC42BPA-206ENST00000429440 C2orf81A6NN90 581 aa9□□□□□ -0.97
CDC42BPA-206ENST00000429440 NOP56O00567 594 aaKnown RBP9□□□□□ -0.97
CDC42BPA-206ENST00000429440 COPEO14579 308 aa9□□□□□ -0.97
CDC42BPA-206ENST00000429440 ACOT8O14734 319 aa9□□□□□ -0.97
CDC42BPA-206ENST00000429440 RIMBP2O15034 1052 aa9□□□□□ -0.97
CDC42BPA-206ENST00000429440 NOS1APO75052 506 aaPredicted RBP9□□□□□ -0.97
CDC42BPA-206ENST00000429440 UPK1BO75841 260 aa9□□□□□ -0.97
CDC42BPA-206ENST00000429440 FTLP02792 175 aaPredicted RBP9□□□□□ -0.97
CDC42BPA-206ENST00000429440 KITP10721 976 aa9□□□□□ -0.97
CDC42BPA-206ENST00000429440 BMP4P12644 408 aa9□□□□□ -0.97
CDC42BPA-206ENST00000429440 IL12AP29459 219 aa9□□□□□ -0.97
CDC42BPA-206ENST00000429440 MAGEA11P43364 429 aa9□□□□□ -0.97
CDC42BPA-206ENST00000429440 ABCG1P45844 678 aa9□□□□□ -0.97
CDC42BPA-206ENST00000429440 SERPINB10P48595 397 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms