RNA–Protein interactions for RNA: ENST00000428205.1

AP001117.1-201, humanhuman

TSL 2 BASIC

Gene AP001117.1, Length 609 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001117.1-201ENST00000428205 RTP4Q96DX8 246 aa3.5□□□□□ -1.85
AP001117.1-201ENST00000428205 CCDC138Q96M89 665 aa3.5□□□□□ -1.85
AP001117.1-201ENST00000428205 NPAS1Q99742 590 aa3.5□□□□□ -1.85
AP001117.1-201ENST00000428205 MECRQ9BV79 373 aa3.5□□□□□ -1.85
AP001117.1-201ENST00000428205 HIPK3Q9H422 1215 aa3.5□□□□□ -1.85
AP001117.1-201ENST00000428205 LIN7CQ9NUP9 197 aaKnown RBP3.5□□□□□ -1.85
AP001117.1-201ENST00000428205 GEMIN8Q9NWZ8 242 aaKnown RBP3.5□□□□□ -1.85
AP001117.1-201ENST00000428205 ZDHHC7Q9NXF8 308 aa3.5□□□□□ -1.85
AP001117.1-201ENST00000428205 IL36RNQ9UBH0 155 aa3.5□□□□□ -1.85
AP001117.1-201ENST00000428205 CNTN6Q9UQ52 1028 aa3.5□□□□□ -1.85
AP001117.1-201ENST00000428205 RAP2CQ9Y3L5 183 aa3.5□□□□□ -1.85
AP001117.1-201ENST00000428205 PLSCR5A0PG75 271 aa3.49□□□□□ -1.85
AP001117.1-201ENST00000428205 TMEM247A6NEH6 219 aa3.49□□□□□ -1.85
AP001117.1-201ENST00000428205 PRSS47A8MTI9 375 aa3.49□□□□□ -1.85
AP001117.1-201ENST00000428205 SLC16A5O15375 505 aa3.49□□□□□ -1.85
AP001117.1-201ENST00000428205 ASAP2O43150 1006 aa3.49□□□□□ -1.85
AP001117.1-201ENST00000428205 DNPH1O43598 174 aa3.49□□□□□ -1.85
AP001117.1-201ENST00000428205 HLA-DQA2P01906 255 aa3.49□□□□□ -1.85
AP001117.1-201ENST00000428205 HOXB9P17482 250 aaPredicted RBP3.49□□□□□ -1.85
AP001117.1-201ENST00000428205 GNLYP22749 145 aa3.49□□□□□ -1.85
AP001117.1-201ENST00000428205 TNNT3P45378 269 aaPredicted RBP3.49□□□□□ -1.85
AP001117.1-201ENST00000428205 PCP4P48539 62 aa3.49□□□□□ -1.85
AP001117.1-201ENST00000428205 PMS2P54278 862 aa3.49□□□□□ -1.85
AP001117.1-201ENST00000428205 TMPRSS3P57727 454 aa3.49□□□□□ -1.85
AP001117.1-201ENST00000428205 COASYQ13057 564 aa3.49□□□□□ -1.85
AP001117.1-201ENST00000428205 PLCB4Q15147 1175 aa3.49□□□□□ -1.85
AP001117.1-201ENST00000428205 BTBD16Q32M84 506 aa3.49□□□□□ -1.85
AP001117.1-201ENST00000428205 TBRG1Q3YBR2 411 aa3.49□□□□□ -1.85
AP001117.1-201ENST00000428205 HEPHL1Q6MZM0 1159 aa3.49□□□□□ -1.85
AP001117.1-201ENST00000428205 TMEM71Q6P5X7 295 aa3.49□□□□□ -1.85
AP001117.1-201ENST00000428205 CTR9Q6PD62 1173 aa3.49□□□□□ -1.85
AP001117.1-201ENST00000428205 H1FNTQ75WM6 255 aaPredicted RBP3.49□□□□□ -1.85
AP001117.1-201ENST00000428205 CLIP4Q8N3C7 705 aa3.49□□□□□ -1.85
AP001117.1-201ENST00000428205 MORC4Q8TE76 937 aa3.49□□□□□ -1.85
AP001117.1-201ENST00000428205 WFIKKN2Q8TEU8 576 aa3.49□□□□□ -1.85
AP001117.1-201ENST00000428205 RBM28Q9NW13 759 aaKnown RBP3.49□□□□□ -1.85
AP001117.1-201ENST00000428205 KCNG2Q9UJ96 466 aa3.49□□□□□ -1.85
AP001117.1-201ENST00000428205 SLC25A13Q9UJS0 675 aa3.49□□□□□ -1.85
AP001117.1-201ENST00000428205 KIF3AQ9Y496 699 aa3.49□□□□□ -1.85
AP001117.1-201ENST00000428205 SRPRBQ9Y5M8 271 aaKnown RBP3.49□□□□□ -1.85
AP001117.1-201ENST00000428205 RAI2Q9Y5P3 530 aa3.49□□□□□ -1.85
AP001117.1-201ENST00000428205 A0A087WYN8 130 aa3.48□□□□□ -1.85
AP001117.1-201ENST00000428205 TCRBV7S3A2A0A539 114 aa3.48□□□□□ -1.85
AP001117.1-201ENST00000428205 FAM90A18PA6NE21 464 aa3.48□□□□□ -1.85
AP001117.1-201ENST00000428205 FAM90A16PA6NEW6 464 aa3.48□□□□□ -1.85
AP001117.1-201ENST00000428205 FAM90A9PA6NNJ1 464 aa3.48□□□□□ -1.85
AP001117.1-201ENST00000428205 CYSRT1A8MQ03 144 aa3.48□□□□□ -1.85
AP001117.1-201ENST00000428205 FAM90A5PA8MXJ8 464 aa3.48□□□□□ -1.85
AP001117.1-201ENST00000428205 FRAT2O75474 233 aaPredicted RBP3.48□□□□□ -1.85
AP001117.1-201ENST00000428205 TMCC1O94876 653 aa3.48□□□□□ -1.85
AP001117.1-201ENST00000428205 ZBTB11O95625 1053 aaPredicted RBP3.48□□□□□ -1.85
AP001117.1-201ENST00000428205 NBPF7P0C2Y1 421 aaPredicted RBP3.48□□□□□ -1.85
AP001117.1-201ENST00000428205 FAM90A15PP0C7V4 464 aa3.48□□□□□ -1.85
AP001117.1-201ENST00000428205 FAM90A14PP0C7W9 464 aa3.48□□□□□ -1.85
AP001117.1-201ENST00000428205 PRPH2P23942 346 aa3.48□□□□□ -1.85
AP001117.1-201ENST00000428205 SSR1P43307 286 aaKnown RBP3.48□□□□□ -1.85
AP001117.1-201ENST00000428205 PPP3CCP48454 512 aa3.48□□□□□ -1.85
AP001117.1-201ENST00000428205 AMTP48728 403 aa3.48□□□□□ -1.85
AP001117.1-201ENST00000428205 RGS19P49795 217 aa3.48□□□□□ -1.85
AP001117.1-201ENST00000428205 PDLIM4P50479 330 aa3.48□□□□□ -1.85
AP001117.1-201ENST00000428205 CDK7P50613 346 aa3.48□□□□□ -1.85
AP001117.1-201ENST00000428205 CLCN5P51795 746 aa3.48□□□□□ -1.85
AP001117.1-201ENST00000428205 NUDT6P53370 316 aa3.48□□□□□ -1.85
AP001117.1-201ENST00000428205 LMOD3Q0VAK6 560 aa3.48□□□□□ -1.85
AP001117.1-201ENST00000428205 HNF4GQ14541 408 aa3.48□□□□□ -1.85
AP001117.1-201ENST00000428205 ZNF284Q2VY69 593 aa3.48□□□□□ -1.85
AP001117.1-201ENST00000428205 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.48□□□□□ -1.85
AP001117.1-201ENST00000428205 ZNF771Q7L3S4 317 aaPredicted RBP3.48□□□□□ -1.85
AP001117.1-201ENST00000428205 ARMC9Q7Z3E5 817 aa3.48□□□□□ -1.85
AP001117.1-201ENST00000428205 FJX1Q86VR8 437 aa3.48□□□□□ -1.85
AP001117.1-201ENST00000428205 PALB2Q86YC2 1186 aa3.48□□□□□ -1.85
AP001117.1-201ENST00000428205 HORMAD2Q8N7B1 307 aa3.48□□□□□ -1.85
AP001117.1-201ENST00000428205 TMEM163Q8TC26 289 aa3.48□□□□□ -1.85
AP001117.1-201ENST00000428205 SLC2A12Q8TD20 617 aa3.48□□□□□ -1.85
AP001117.1-201ENST00000428205 SLC35F5Q8WV83 523 aa3.48□□□□□ -1.85
AP001117.1-201ENST00000428205 HES6Q96HZ4 224 aa3.48□□□□□ -1.85
AP001117.1-201ENST00000428205 FRG2BQ96QU4 278 aa3.48□□□□□ -1.85
AP001117.1-201ENST00000428205 Q9N2J8 555 aa3.48□□□□□ -1.85
AP001117.1-201ENST00000428205 ZBED9Q6R2W3 1325 aa3.47□□□□□ -1.85
AP001117.1-201ENST00000428205 NACADO15069 1562 aa3.47□□□□□ -1.85
AP001117.1-201ENST00000428205 AGAP5A6NIR3 686 aa3.47□□□□□ -1.85
AP001117.1-201ENST00000428205 VGLL3A8MV65 326 aa3.47□□□□□ -1.85
AP001117.1-201ENST00000428205 EFCAB8A8MWE9 144 aa3.47□□□□□ -1.85
AP001117.1-201ENST00000428205 ERVV-2B6SEH9 535 aa3.47□□□□□ -1.85
AP001117.1-201ENST00000428205 LDB2O43679 373 aa3.47□□□□□ -1.85
AP001117.1-201ENST00000428205 KCNJ13O60928 360 aa3.47□□□□□ -1.85
AP001117.1-201ENST00000428205 SOX30O94993 753 aa3.47□□□□□ -1.85
AP001117.1-201ENST00000428205 MMP3P08254 477 aa3.47□□□□□ -1.85
AP001117.1-201ENST00000428205 ABCB4P21439 1286 aa3.47□□□□□ -1.85
AP001117.1-201ENST00000428205 PRKCHP24723 683 aa3.47□□□□□ -1.85
AP001117.1-201ENST00000428205 HMGN5P82970 282 aaKnown RBP3.47□□□□□ -1.85
AP001117.1-201ENST00000428205 POU3F1Q03052 451 aaPredicted RBP3.47□□□□□ -1.85
AP001117.1-201ENST00000428205 CCDC173Q0VFZ6 552 aa3.47□□□□□ -1.85
AP001117.1-201ENST00000428205 STARD3Q14849 445 aa3.47□□□□□ -1.85
AP001117.1-201ENST00000428205 ZACNQ401N2 412 aa3.47□□□□□ -1.85
AP001117.1-201ENST00000428205 GXYLT1Q4G148 440 aa3.47□□□□□ -1.85
AP001117.1-201ENST00000428205 HSP90AB3PQ58FF7 597 aa3.47□□□□□ -1.85
AP001117.1-201ENST00000428205 ATPAF1Q5TC12 328 aaPredicted RBP3.47□□□□□ -1.85
AP001117.1-201ENST00000428205 RINLQ6ZS11 566 aa3.47□□□□□ -1.85
AP001117.1-201ENST00000428205 ZSCAN30Q86W11 494 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms