RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 K7ERQ8 282 aa16.02■□□□□ 0.16
DDX55-203ENST00000421670 KCNK1O00180 336 aa16.02■□□□□ 0.16
DDX55-203ENST00000421670 LIASO43766 372 aa16.02■□□□□ 0.16
DDX55-203ENST00000421670 CD160O95971 181 aa16.02■□□□□ 0.16
DDX55-203ENST00000421670 PEX11BO96011 259 aa16.02■□□□□ 0.16
DDX55-203ENST00000421670 ATP5BP06576 529 aaKnown RBP16.02■□□□□ 0.16
DDX55-203ENST00000421670 SULT2A1Q06520 285 aa16.02■□□□□ 0.16
DDX55-203ENST00000421670 SLC45A4Q5BKX6 768 aa16.02■□□□□ 0.16
DDX55-203ENST00000421670 DNTTIP2Q5QJE6 756 aaKnown RBP16.02■□□□□ 0.16
DDX55-203ENST00000421670 CCDC13Q8IYE1 715 aa16.02■□□□□ 0.16
DDX55-203ENST00000421670 SLC35B2Q8TB61 432 aa16.02■□□□□ 0.16
DDX55-203ENST00000421670 EDAQ92838 391 aa16.02■□□□□ 0.16
DDX55-203ENST00000421670 MYO19Q96H55 970 aa16.02■□□□□ 0.16
DDX55-203ENST00000421670 ZNF419Q96HQ0 510 aaPredicted RBP16.02■□□□□ 0.16
DDX55-203ENST00000421670 SHDQ96IW2 340 aa16.02■□□□□ 0.16
DDX55-203ENST00000421670 MRGPRX3Q96LB0 322 aa16.02■□□□□ 0.16
DDX55-203ENST00000421670 TSGA13Q96PP4 275 aa16.02■□□□□ 0.16
DDX55-203ENST00000421670 CEP41Q9BYV8 373 aa16.02■□□□□ 0.16
DDX55-203ENST00000421670 LTB4R2Q9NPC1 389 aa16.02■□□□□ 0.16
DDX55-203ENST00000421670 SEPT10Q9P0V9 454 aa16.02■□□□□ 0.16
DDX55-203ENST00000421670 UBA2Q9UBT2 640 aaPredicted RBP16.02■□□□□ 0.16
DDX55-203ENST00000421670 CDC23Q9UJX2 597 aa16.02■□□□□ 0.16
DDX55-203ENST00000421670 MRFAP1Q9Y605 127 aa16.02■□□□□ 0.16
DDX55-203ENST00000421670 SMAD6O43541 496 aaKnown RBP16.01■□□□□ 0.15
DDX55-203ENST00000421670 RNF40O75150 1001 aa16.01■□□□□ 0.15
DDX55-203ENST00000421670 ASLP04424 464 aa16.01■□□□□ 0.15
DDX55-203ENST00000421670 SRCP12931 536 aa16.01■□□□□ 0.15
DDX55-203ENST00000421670 CCNCP24863 283 aa16.01■□□□□ 0.15
DDX55-203ENST00000421670 RBL1P28749 1068 aa16.01■□□□□ 0.15
DDX55-203ENST00000421670 TIE1P35590 1138 aa16.01■□□□□ 0.15
DDX55-203ENST00000421670 PAFAH1B1P43034 410 aa16.01■□□□□ 0.15
DDX55-203ENST00000421670 TNFRSF4P43489 277 aa16.01■□□□□ 0.15
DDX55-203ENST00000421670 KIR2DL1P43626 348 aaPredicted RBP16.01■□□□□ 0.15
DDX55-203ENST00000421670 SERPINH1P50454 418 aaKnown RBP16.01■□□□□ 0.15
DDX55-203ENST00000421670 CLCN6P51797 869 aa16.01■□□□□ 0.15
DDX55-203ENST00000421670 SIGLEC14Q08ET2 396 aa16.01■□□□□ 0.15
DDX55-203ENST00000421670 XRCC4Q13426 336 aa16.01■□□□□ 0.15
DDX55-203ENST00000421670 BYSLQ13895 437 aaKnown RBP16.01■□□□□ 0.15
DDX55-203ENST00000421670 ZNF234Q14588 700 aa16.01■□□□□ 0.15
DDX55-203ENST00000421670 FNDC3BQ53EP0 1204 aaKnown RBP16.01■□□□□ 0.15
DDX55-203ENST00000421670 C2orf27AQ580R0 203 aa16.01■□□□□ 0.15
DDX55-203ENST00000421670 RETSATQ6NUM9 610 aa16.01■□□□□ 0.15
DDX55-203ENST00000421670 DARS2Q6PI48 645 aaKnown RBP16.01■□□□□ 0.15
DDX55-203ENST00000421670 LRRC49Q8IUZ0 686 aa16.01■□□□□ 0.15
DDX55-203ENST00000421670 ZNF687Q8N1G0 1237 aa16.01■□□□□ 0.15
DDX55-203ENST00000421670 SH2D3CQ8N5H7 860 aa16.01■□□□□ 0.15
DDX55-203ENST00000421670 ZNF366Q8N895 744 aa16.01■□□□□ 0.15
DDX55-203ENST00000421670 ZNF513Q8N8E2 541 aaPredicted RBP16.01■□□□□ 0.15
DDX55-203ENST00000421670 ATP11CQ8NB49 1132 aa16.01■□□□□ 0.15
DDX55-203ENST00000421670 UCMAQ8WVF2 138 aa16.01■□□□□ 0.15
DDX55-203ENST00000421670 ACOX2Q99424 681 aa16.01■□□□□ 0.15
DDX55-203ENST00000421670 CACNA2D2Q9NY47 1150 aa16.01■□□□□ 0.15
DDX55-203ENST00000421670 SLCO3A1Q9UIG8 710 aa16.01■□□□□ 0.15
DDX55-203ENST00000421670 HS3ST2Q9Y278 367 aa16.01■□□□□ 0.15
DDX55-203ENST00000421670 FCF1Q9Y324 198 aaKnown RBP16.01■□□□□ 0.15
DDX55-203ENST00000421670 STARD13Q9Y3M8 1113 aa16.01■□□□□ 0.15
DDX55-203ENST00000421670 GOLGA6L10A0A0M3HER8 536 aa16■□□□□ 0.15
DDX55-203ENST00000421670 ZSCAN5CA6NGD5 496 aaPredicted RBP16■□□□□ 0.15
DDX55-203ENST00000421670 HACD1B0YJ81 288 aa16■□□□□ 0.15
DDX55-203ENST00000421670 TMCC1O94876 653 aa16■□□□□ 0.15
DDX55-203ENST00000421670 PDGFBP01127 241 aaPredicted RBP16■□□□□ 0.15
DDX55-203ENST00000421670 CHRM1P11229 460 aaPredicted RBP16■□□□□ 0.15
DDX55-203ENST00000421670 NRLP54845 237 aa16■□□□□ 0.15
DDX55-203ENST00000421670 SLC10A7Q0GE19 358 aa16■□□□□ 0.15
DDX55-203ENST00000421670 ZBTB17Q13105 803 aa16■□□□□ 0.15
DDX55-203ENST00000421670 OASLQ15646 514 aaKnown RBP16■□□□□ 0.15
DDX55-203ENST00000421670 CCNG2Q16589 344 aa16■□□□□ 0.15
DDX55-203ENST00000421670 KCTD19Q17RG1 926 aaPredicted RBP16■□□□□ 0.15
DDX55-203ENST00000421670 TMCO4Q5TGY1 634 aa16■□□□□ 0.15
DDX55-203ENST00000421670 HEATR6Q6AI08 1181 aaKnown RBP16■□□□□ 0.15
DDX55-203ENST00000421670 TIGD7Q6NT04 549 aaPredicted RBP16■□□□□ 0.15
DDX55-203ENST00000421670 Q6ZS52 159 aa16■□□□□ 0.15
DDX55-203ENST00000421670 CDKL3Q8IVW4 592 aaPredicted RBP16■□□□□ 0.15
DDX55-203ENST00000421670 USP33Q8TEY7 942 aa16■□□□□ 0.15
DDX55-203ENST00000421670 TMEM121Q9BTD3 319 aa16■□□□□ 0.15
DDX55-203ENST00000421670 BRD8Q9H0E9 1235 aa16■□□□□ 0.15
DDX55-203ENST00000421670 RNF14Q9UBS8 474 aa16■□□□□ 0.15
DDX55-203ENST00000421670 PLA2G4CQ9UP65 541 aa16■□□□□ 0.15
DDX55-203ENST00000421670 MRPS17Q9Y2R5 130 aaKnown RBP16■□□□□ 0.15
DDX55-203ENST00000421670 WASH3PC4AMC7 463 aa16■□□□□ 0.15
DDX55-203ENST00000421670 STK25O00506 426 aa16■□□□□ 0.15
DDX55-203ENST00000421670 MATN3O15232 486 aa16■□□□□ 0.15
DDX55-203ENST00000421670 KCNN4O15554 427 aa16■□□□□ 0.15
DDX55-203ENST00000421670 TIMM44O43615 452 aa16■□□□□ 0.15
DDX55-203ENST00000421670 SRPRAP08240 638 aaKnown RBP16■□□□□ 0.15
DDX55-203ENST00000421670 CHRNB1P11230 501 aa16■□□□□ 0.15
DDX55-203ENST00000421670 HLA-EP13747 358 aa16■□□□□ 0.15
DDX55-203ENST00000421670 CCNB1P14635 433 aa16■□□□□ 0.15
DDX55-203ENST00000421670 IL12RB1P42701 662 aa16■□□□□ 0.15
DDX55-203ENST00000421670 WASP42768 502 aa16■□□□□ 0.15
DDX55-203ENST00000421670 KCNJ1P48048 391 aa16■□□□□ 0.15
DDX55-203ENST00000421670 GEMIN4P57678 1058 aaKnown RBP16■□□□□ 0.15
DDX55-203ENST00000421670 LBRQ14739 615 aaKnown RBP16■□□□□ 0.15
DDX55-203ENST00000421670 TTC27Q6P3X3 843 aa16■□□□□ 0.15
DDX55-203ENST00000421670 CHPFQ8IZ52 775 aa16■□□□□ 0.15
DDX55-203ENST00000421670 ALLCQ8N6M5 410 aa16■□□□□ 0.15
DDX55-203ENST00000421670 FLCNQ8NFG4 579 aa16■□□□□ 0.15
DDX55-203ENST00000421670 PJA1Q8NG27 643 aa16■□□□□ 0.15
DDX55-203ENST00000421670 HTR3CQ8WXA8 447 aa16■□□□□ 0.15
DDX55-203ENST00000421670 NKD2Q969F2 451 aaPredicted RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms