RNA–Protein interactions for RNA: ENST00000420794.2

BDNF-209, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-209ENST00000420794 NSMCE4AQ9NXX6 385 aa7.55□□□□□ -1.2
BDNF-209ENST00000420794 TBC1D3BA6NDS4 549 aa7.54□□□□□ -1.2
BDNF-209ENST00000420794 C2orf81A6NN90 581 aa7.54□□□□□ -1.2
BDNF-209ENST00000420794 DCLK1O15075 740 aa7.54□□□□□ -1.2
BDNF-209ENST00000420794 FAM153BP0C7A2 387 aa7.54□□□□□ -1.2
BDNF-209ENST00000420794 SAT1P21673 171 aa7.54□□□□□ -1.2
BDNF-209ENST00000420794 MTHFRP42898 656 aa7.54□□□□□ -1.2
BDNF-209ENST00000420794 SLC20A2Q08357 652 aa7.54□□□□□ -1.2
BDNF-209ENST00000420794 MPP3Q13368 585 aa7.54□□□□□ -1.2
BDNF-209ENST00000420794 DPYSQ14117 519 aa7.54□□□□□ -1.2
BDNF-209ENST00000420794 CBX2Q14781 532 aaPredicted RBP7.54□□□□□ -1.2
BDNF-209ENST00000420794 FAM153CQ494X1 144 aa7.54□□□□□ -1.2
BDNF-209ENST00000420794 PIK3R6Q5UE93 754 aa7.54□□□□□ -1.2
BDNF-209ENST00000420794 RAPH1Q70E73 1250 aa7.54□□□□□ -1.2
BDNF-209ENST00000420794 C14orf80Q86SX3 495 aa7.54□□□□□ -1.2
BDNF-209ENST00000420794 RASSF3Q86WH2 238 aa7.54□□□□□ -1.2
BDNF-209ENST00000420794 RIBC1Q8N443 379 aaPredicted RBP7.54□□□□□ -1.2
BDNF-209ENST00000420794 ZNF276Q8N554 614 aa7.54□□□□□ -1.2
BDNF-209ENST00000420794 OR7D4Q8NG98 312 aa7.54□□□□□ -1.2
BDNF-209ENST00000420794 ZSCAN18Q8TBC5 510 aaPredicted RBP7.54□□□□□ -1.2
BDNF-209ENST00000420794 SP7Q8TDD2 431 aaPredicted RBP7.54□□□□□ -1.2
BDNF-209ENST00000420794 ACDQ96AP0 544 aa7.54□□□□□ -1.2
BDNF-209ENST00000420794 ZNF599Q96NL3 588 aa7.54□□□□□ -1.2
BDNF-209ENST00000420794 ZIM3Q96PE6 472 aa7.54□□□□□ -1.2
BDNF-209ENST00000420794 SEMA3CQ99985 751 aa7.54□□□□□ -1.2
BDNF-209ENST00000420794 TBL1YQ9BQ87 522 aa7.54□□□□□ -1.2
BDNF-209ENST00000420794 FUT8Q9BYC5 575 aa7.54□□□□□ -1.2
BDNF-209ENST00000420794 PBX4Q9BYU1 374 aa7.54□□□□□ -1.2
BDNF-209ENST00000420794 GPR63Q9BZJ6 419 aa7.54□□□□□ -1.2
BDNF-209ENST00000420794 IL37Q9NZH6 218 aa7.54□□□□□ -1.2
BDNF-209ENST00000420794 CPSF2Q9P2I0 782 aaKnown RBP7.54□□□□□ -1.2
BDNF-209ENST00000420794 DEC1Q9P2X7 70 aa7.54□□□□□ -1.2
BDNF-209ENST00000420794 FAM92AA1XBS5 289 aa7.54□□□□□ -1.2
BDNF-209ENST00000420794 PEX14O75381 377 aa7.54□□□□□ -1.2
BDNF-209ENST00000420794 CRTAMO95727 393 aa7.54□□□□□ -1.2
BDNF-209ENST00000420794 GSTA2P09210 222 aa7.54□□□□□ -1.2
BDNF-209ENST00000420794 HMGA1P17096 107 aaKnown RBP7.54□□□□□ -1.2
BDNF-209ENST00000420794 TPSB2P20231 275 aa7.54□□□□□ -1.2
BDNF-209ENST00000420794 PTPN3P26045 913 aa7.54□□□□□ -1.2
BDNF-209ENST00000420794 IRS1P35568 1242 aa7.54□□□□□ -1.2
BDNF-209ENST00000420794 ELK3P41970 407 aa7.54□□□□□ -1.2
BDNF-209ENST00000420794 NRG1Q02297 640 aaPredicted RBP7.54□□□□□ -1.2
BDNF-209ENST00000420794 BCL2L1Q07817 233 aa7.54□□□□□ -1.2
BDNF-209ENST00000420794 RFTN1Q14699 578 aaPredicted RBP7.54□□□□□ -1.2
BDNF-209ENST00000420794 TPSAB1Q15661 275 aa7.54□□□□□ -1.2
BDNF-209ENST00000420794 NLRP9Q7RTR0 991 aa7.54□□□□□ -1.2
BDNF-209ENST00000420794 ZNF567Q8N184 647 aa7.54□□□□□ -1.2
BDNF-209ENST00000420794 UMODL1-AS1Q8N2C9 162 aa7.54□□□□□ -1.2
BDNF-209ENST00000420794 ANKRD42Q8N9B4 389 aa7.54□□□□□ -1.2
BDNF-209ENST00000420794 TET1Q8NFU7 2136 aa7.54□□□□□ -1.2
BDNF-209ENST00000420794 BLOC1S5Q8TDH9 187 aa7.54□□□□□ -1.2
BDNF-209ENST00000420794 BPIFB1Q8TDL5 484 aa7.54□□□□□ -1.2
BDNF-209ENST00000420794 MRPL38Q96DV4 380 aaKnown RBP7.54□□□□□ -1.2
BDNF-209ENST00000420794 TEKT5Q96M29 485 aa7.54□□□□□ -1.2
BDNF-209ENST00000420794 SENP1Q9P0U3 644 aa7.54□□□□□ -1.2
BDNF-209ENST00000420794 ARHGAP26Q9UNA1 814 aa7.54□□□□□ -1.2
BDNF-209ENST00000420794 F11P03951 625 aa7.54□□□□□ -1.2
BDNF-209ENST00000420794 CD86P42081 329 aa7.54□□□□□ -1.2
BDNF-209ENST00000420794 SERPINB9P50453 376 aa7.54□□□□□ -1.2
BDNF-209ENST00000420794 CLCN4P51793 760 aa7.54□□□□□ -1.2
BDNF-209ENST00000420794 ARHGEF7Q14155 803 aa7.54□□□□□ -1.2
BDNF-209ENST00000420794 SPARCL1Q14515 664 aa7.54□□□□□ -1.2
BDNF-209ENST00000420794 HIBCHQ6NVY1 386 aaPredicted RBP7.54□□□□□ -1.2
BDNF-209ENST00000420794 LRRC6Q86X45 466 aa7.54□□□□□ -1.2
BDNF-209ENST00000420794 SLC39A13Q96H72 371 aa7.54□□□□□ -1.2
BDNF-209ENST00000420794 VN1R3Q9BXE9 311 aa7.54□□□□□ -1.2
BDNF-209ENST00000420794 IL22Q9GZX6 179 aa7.54□□□□□ -1.2
BDNF-209ENST00000420794 GBA3Q9H227 469 aa7.54□□□□□ -1.2
BDNF-209ENST00000420794 BRD9Q9H8M2 597 aa7.54□□□□□ -1.2
BDNF-209ENST00000420794 CNOT10Q9H9A5 744 aaKnown RBP7.54□□□□□ -1.2
BDNF-209ENST00000420794 C20orf96Q9NUD7 363 aaPredicted RBP7.54□□□□□ -1.2
BDNF-209ENST00000420794 OSER1Q9NX31 292 aa7.54□□□□□ -1.2
BDNF-209ENST00000420794 IGSF9Q9P2J2 1179 aa7.54□□□□□ -1.2
BDNF-209ENST00000420794 PSMC3IPQ9P2W1 217 aaPredicted RBP7.54□□□□□ -1.2
BDNF-209ENST00000420794 PKP3Q9Y446 797 aa7.54□□□□□ -1.2
BDNF-209ENST00000420794 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.53□□□□□ -1.2
BDNF-209ENST00000420794 SOBPA7XYQ1 873 aa7.53□□□□□ -1.2
BDNF-209ENST00000420794 STX7O15400 261 aaKnown RBP7.53□□□□□ -1.2
BDNF-209ENST00000420794 MLNP12872 115 aa7.53□□□□□ -1.2
BDNF-209ENST00000420794 SERPINA4P29622 427 aa7.53□□□□□ -1.2
BDNF-209ENST00000420794 GDF10P55107 478 aa7.53□□□□□ -1.2
BDNF-209ENST00000420794 SLC12A1Q13621 1099 aa7.53□□□□□ -1.2
BDNF-209ENST00000420794 COL13A1Q5TAT6 717 aaPredicted RBP7.53□□□□□ -1.2
BDNF-209ENST00000420794 MREGQ8N565 214 aa7.53□□□□□ -1.2
BDNF-209ENST00000420794 MCUQ8NE86 351 aa7.53□□□□□ -1.2
BDNF-209ENST00000420794 CPT1BQ92523 772 aa7.53□□□□□ -1.2
BDNF-209ENST00000420794 PTPRN2Q92932 1015 aa7.53□□□□□ -1.2
BDNF-209ENST00000420794 TSGA13Q96PP4 275 aa7.53□□□□□ -1.2
BDNF-209ENST00000420794 NUDCD1Q96RS6 583 aa7.53□□□□□ -1.2
BDNF-209ENST00000420794 SLC25A51Q9H1U9 297 aa7.53□□□□□ -1.2
BDNF-209ENST00000420794 PCDH10Q9P2E7 1040 aa7.53□□□□□ -1.2
BDNF-209ENST00000420794 SLC30A1Q9Y6M5 507 aa7.53□□□□□ -1.2
BDNF-209ENST00000420794 SIP14410 1827 aa7.53□□□□□ -1.2
BDNF-209ENST00000420794 CEP290O15078 2479 aa7.53□□□□□ -1.2
BDNF-209ENST00000420794 TRIP11Q15643 1979 aa7.53□□□□□ -1.2
BDNF-209ENST00000420794 HEATR9A2RTY3 570 aa7.53□□□□□ -1.2
BDNF-209ENST00000420794 STK25O00506 426 aa7.53□□□□□ -1.2
BDNF-209ENST00000420794 RIPK2O43353 540 aa7.53□□□□□ -1.2
BDNF-209ENST00000420794 RNASEH1O60930 286 aaKnown RBP7.53□□□□□ -1.2
BDNF-209ENST00000420794 PPFIA2O75334 1257 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms