RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 CCR5P51681 352 aa16.85■□□□□ 0.29
LINC00404-201ENST00000418660 ADPRHP54922 357 aa16.85■□□□□ 0.29
LINC00404-201ENST00000418660 BNC1Q01954 994 aa16.85■□□□□ 0.29
LINC00404-201ENST00000418660 RETSATQ6NUM9 610 aa16.85■□□□□ 0.29
LINC00404-201ENST00000418660 RWDD4Q6NW29 188 aaKnown RBP16.85■□□□□ 0.29
LINC00404-201ENST00000418660 DCUN1D2Q6PH85 259 aa16.85■□□□□ 0.29
LINC00404-201ENST00000418660 LINGO4Q6UY18 593 aa16.85■□□□□ 0.29
LINC00404-201ENST00000418660 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.85■□□□□ 0.29
LINC00404-201ENST00000418660 ZNF571Q7Z3V5 609 aaPredicted RBP16.85■□□□□ 0.29
LINC00404-201ENST00000418660 NLRP14Q86W24 1093 aa16.85■□□□□ 0.29
LINC00404-201ENST00000418660 OR2A12Q8NGT7 310 aa16.85■□□□□ 0.29
LINC00404-201ENST00000418660 OR14C36Q8NHC7 312 aa16.85■□□□□ 0.29
LINC00404-201ENST00000418660 PIP4K2CQ8TBX8 421 aa16.85■□□□□ 0.29
LINC00404-201ENST00000418660 TBC1D31Q96DN5 1066 aa16.85■□□□□ 0.29
LINC00404-201ENST00000418660 ATP13A1Q9HD20 1204 aa16.85■□□□□ 0.29
LINC00404-201ENST00000418660 PARVAQ9NVD7 372 aa16.85■□□□□ 0.29
LINC00404-201ENST00000418660 TMEM248Q9NWD8 314 aa16.85■□□□□ 0.29
LINC00404-201ENST00000418660 TPX2Q9ULW0 747 aaKnown RBP16.85■□□□□ 0.29
LINC00404-201ENST00000418660 A0A1B0GVT2 93 aa16.84■□□□□ 0.29
LINC00404-201ENST00000418660 TMCO5BA8MYB1 307 aa16.84■□□□□ 0.29
LINC00404-201ENST00000418660 GOLGA6L19H0YKK7 550 aa16.84■□□□□ 0.29
LINC00404-201ENST00000418660 CER1O95813 267 aa16.84■□□□□ 0.29
LINC00404-201ENST00000418660 GZMAP12544 262 aa16.84■□□□□ 0.29
LINC00404-201ENST00000418660 DESP17661 470 aa16.84■□□□□ 0.29
LINC00404-201ENST00000418660 L1CAMP32004 1257 aa16.84■□□□□ 0.29
LINC00404-201ENST00000418660 ETFBP38117 255 aa16.84■□□□□ 0.29
LINC00404-201ENST00000418660 METAP1P53582 386 aa16.84■□□□□ 0.29
LINC00404-201ENST00000418660 AIF1P55008 147 aa16.84■□□□□ 0.29
LINC00404-201ENST00000418660 KLHL30Q0D2K2 578 aa16.84■□□□□ 0.29
LINC00404-201ENST00000418660 ZNF252P-AS1Q0IIN9 211 aa16.84■□□□□ 0.29
LINC00404-201ENST00000418660 HLA-BQ31612 363 aa16.84■□□□□ 0.29
LINC00404-201ENST00000418660 EFHC2Q5JST6 749 aa16.84■□□□□ 0.29
LINC00404-201ENST00000418660 E4F1Q66K89 784 aaPredicted RBP16.84■□□□□ 0.29
LINC00404-201ENST00000418660 SCYL2Q6P3W7 929 aa16.84■□□□□ 0.29
LINC00404-201ENST00000418660 ACE2Q9BYF1 805 aaPredicted RBP16.84■□□□□ 0.29
LINC00404-201ENST00000418660 CEP44Q9C0F1 390 aa16.84■□□□□ 0.29
LINC00404-201ENST00000418660 KDM4CQ9H3R0 1056 aa16.84■□□□□ 0.29
LINC00404-201ENST00000418660 GAREM1Q9H706 876 aa16.84■□□□□ 0.29
LINC00404-201ENST00000418660 NDFIP2Q9NV92 336 aa16.84■□□□□ 0.29
LINC00404-201ENST00000418660 NEU3Q9UQ49 428 aa16.84■□□□□ 0.29
LINC00404-201ENST00000418660 TBC1D3DA0A087WVF3 549 aa16.83■□□□□ 0.28
LINC00404-201ENST00000418660 TBC1D3IA0A087WXS9 549 aa16.83■□□□□ 0.28
LINC00404-201ENST00000418660 TBC1D3EA0A087X179 549 aa16.83■□□□□ 0.28
LINC00404-201ENST00000418660 TBC1D3KA0A087X1G2 549 aa16.83■□□□□ 0.28
LINC00404-201ENST00000418660 CXorf51AA0A1B0GTR3 108 aa16.83■□□□□ 0.28
LINC00404-201ENST00000418660 TBC1D3FA6NER0 549 aaPredicted RBP16.83■□□□□ 0.28
LINC00404-201ENST00000418660 TBC1D3LB9A6J9 549 aa16.83■□□□□ 0.28
LINC00404-201ENST00000418660 TBC1D3HP0C7X1 549 aa16.83■□□□□ 0.28
LINC00404-201ENST00000418660 ZNF883P0CG24 379 aa16.83■□□□□ 0.28
LINC00404-201ENST00000418660 CHRNA3P32297 505 aa16.83■□□□□ 0.28
LINC00404-201ENST00000418660 PBX1P40424 430 aa16.83■□□□□ 0.28
LINC00404-201ENST00000418660 SERPINH1P50454 418 aaKnown RBP16.83■□□□□ 0.28
LINC00404-201ENST00000418660 UBASH3AP57075 661 aa16.83■□□□□ 0.28
LINC00404-201ENST00000418660 RACK1P63244 317 aaKnown RBP16.83■□□□□ 0.28
LINC00404-201ENST00000418660 ARF5P84085 180 aa16.83■□□□□ 0.28
LINC00404-201ENST00000418660 CNTN1Q12860 1018 aa16.83■□□□□ 0.28
LINC00404-201ENST00000418660 MAMLD1Q13495 774 aa16.83■□□□□ 0.28
LINC00404-201ENST00000418660 HNRNPDQ14103 355 aaKnown RBP16.83■□□□□ 0.28
LINC00404-201ENST00000418660 NUMA1Q14980 2115 aa16.83■□□□□ 0.28
LINC00404-201ENST00000418660 KIF19Q2TAC6 998 aa16.83■□□□□ 0.28
LINC00404-201ENST00000418660 SKOR2Q2VWA4 1001 aaPredicted RBP16.83■□□□□ 0.28
LINC00404-201ENST00000418660 ZSCAN23Q3MJ62 389 aa16.83■□□□□ 0.28
LINC00404-201ENST00000418660 TBC1D3GQ6DHY5 549 aa16.83■□□□□ 0.28
LINC00404-201ENST00000418660 TBC1D3CQ6IPX1 549 aa16.83■□□□□ 0.28
LINC00404-201ENST00000418660 PLEKHA7Q6IQ23 1121 aa16.83■□□□□ 0.28
LINC00404-201ENST00000418660 C22orf39Q6P5X5 142 aa16.83■□□□□ 0.28
LINC00404-201ENST00000418660 TBC1D3Q8IZP1 549 aaPredicted RBP16.83■□□□□ 0.28
LINC00404-201ENST00000418660 TMIEQ8NEW7 156 aa16.83■□□□□ 0.28
LINC00404-201ENST00000418660 MAGEH1Q9H213 219 aa16.83■□□□□ 0.28
LINC00404-201ENST00000418660 EBF2Q9HAK2 575 aa16.83■□□□□ 0.28
LINC00404-201ENST00000418660 DNAI1Q9UI46 699 aa16.83■□□□□ 0.28
LINC00404-201ENST00000418660 FZD10Q9ULW2 581 aa16.83■□□□□ 0.28
LINC00404-201ENST00000418660 ANKRD6Q9Y2G4 727 aa16.83■□□□□ 0.28
LINC00404-201ENST00000418660 DOCK4Q8N1I0 1966 aa16.82■□□□□ 0.28
LINC00404-201ENST00000418660 LAMA1P25391 3075 aa16.82■□□□□ 0.28
LINC00404-201ENST00000418660 A0A1W2PQJ5 194 aa16.82■□□□□ 0.28
LINC00404-201ENST00000418660 PLK4O00444 970 aa16.82■□□□□ 0.28
LINC00404-201ENST00000418660 DDX3XO00571 662 aaKnown RBP eCLIP16.82■□□□□ 0.28
LINC00404-201ENST00000418660 PLRG1O43660 514 aaKnown RBP16.82■□□□□ 0.28
LINC00404-201ENST00000418660 RTN2O75298 545 aa16.82■□□□□ 0.28
LINC00404-201ENST00000418660 FTLP02792 175 aaPredicted RBP16.82■□□□□ 0.28
LINC00404-201ENST00000418660 PRNPP04156 253 aa16.82■□□□□ 0.28
LINC00404-201ENST00000418660 CTSLP07711 333 aa16.82■□□□□ 0.28
LINC00404-201ENST00000418660 ACVRL1P37023 503 aa16.82■□□□□ 0.28
LINC00404-201ENST00000418660 RECQLP46063 649 aaPredicted RBP16.82■□□□□ 0.28
LINC00404-201ENST00000418660 OGDHQ02218 1023 aa16.82■□□□□ 0.28
LINC00404-201ENST00000418660 AGBL4Q5VU57 503 aa16.82■□□□□ 0.28
LINC00404-201ENST00000418660 TMC6Q7Z403 805 aa16.82■□□□□ 0.28
LINC00404-201ENST00000418660 PYROXD2Q8N2H3 581 aa16.82■□□□□ 0.28
LINC00404-201ENST00000418660 PCDH20Q8N6Y1 951 aaKnown RBP16.82■□□□□ 0.28
LINC00404-201ENST00000418660 ARHGEF2Q92974 986 aaKnown RBP16.82■□□□□ 0.28
LINC00404-201ENST00000418660 TNKS2Q9H2K2 1166 aa16.82■□□□□ 0.28
LINC00404-201ENST00000418660 IL21RQ9HBE5 538 aa16.82■□□□□ 0.28
LINC00404-201ENST00000418660 ANGPTL2Q9UKU9 493 aa16.82■□□□□ 0.28
LINC00404-201ENST00000418660 SNX11Q9Y5W9 270 aa16.82■□□□□ 0.28
LINC00404-201ENST00000418660 SPTBN2O15020 2390 aa16.82■□□□□ 0.28
LINC00404-201ENST00000418660 KPNA3O00505 521 aaPredicted RBP16.81■□□□□ 0.28
LINC00404-201ENST00000418660 VILLO15195 856 aa16.81■□□□□ 0.28
LINC00404-201ENST00000418660 LATO43561 262 aa16.81■□□□□ 0.28
LINC00404-201ENST00000418660 SH3BP5O60239 455 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms