RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 GET4Q7L5D6 327 aaPredicted RBP11.37□□□□□ -0.59
PTCH1-205ENST00000418258 DNAAF5Q86Y56 855 aa11.37□□□□□ -0.59
PTCH1-205ENST00000418258 KYQ8NBH2 561 aa11.37□□□□□ -0.59
PTCH1-205ENST00000418258 APBB2Q92870 758 aa11.37□□□□□ -0.59
PTCH1-205ENST00000418258 CDHR5Q9HBB8 845 aa11.37□□□□□ -0.59
PTCH1-205ENST00000418258 BPIFA1Q9NP55 256 aa11.37□□□□□ -0.59
PTCH1-205ENST00000418258 OR12D3Q9UGF7 316 aa11.37□□□□□ -0.59
PTCH1-205ENST00000418258 ELK3P41970 407 aa11.37□□□□□ -0.59
PTCH1-205ENST00000418258 PTSQ03393 145 aa11.37□□□□□ -0.59
PTCH1-205ENST00000418258 PFKFB4Q16877 469 aa11.37□□□□□ -0.59
PTCH1-205ENST00000418258 LPPQ93052 612 aa11.37□□□□□ -0.59
PTCH1-205ENST00000418258 APOL4Q9BPW4 351 aa11.37□□□□□ -0.59
PTCH1-205ENST00000418258 TTLL2Q9BWV7 592 aa11.37□□□□□ -0.59
PTCH1-205ENST00000418258 TMEM51Q9NW97 253 aa11.37□□□□□ -0.59
PTCH1-205ENST00000418258 BCLAF3A2AJT9 711 aaKnown RBP11.37□□□□□ -0.59
PTCH1-205ENST00000418258 SLITRK3O94933 977 aa11.37□□□□□ -0.59
PTCH1-205ENST00000418258 PAEPP09466 180 aa11.37□□□□□ -0.59
PTCH1-205ENST00000418258 CXCR2P25025 360 aa11.37□□□□□ -0.59
PTCH1-205ENST00000418258 S100A3P33764 101 aa11.37□□□□□ -0.59
PTCH1-205ENST00000418258 GP5P40197 560 aa11.37□□□□□ -0.59
PTCH1-205ENST00000418258 SRLQ86TD4 932 aa11.37□□□□□ -0.59
PTCH1-205ENST00000418258 SNX6Q9UNH7 406 aa11.37□□□□□ -0.59
PTCH1-205ENST00000418258 MYH3P11055 1940 aa11.37□□□□□ -0.59
PTCH1-205ENST00000418258 MYL12BO14950 172 aa11.37□□□□□ -0.59
PTCH1-205ENST00000418258 SPATA31D3P0C874 917 aa11.37□□□□□ -0.59
PTCH1-205ENST00000418258 FAM46CQ5VWP2 391 aa11.37□□□□□ -0.59
PTCH1-205ENST00000418258 RBM43Q6ZSC3 357 aaKnown RBP11.37□□□□□ -0.59
PTCH1-205ENST00000418258 SPATA31D4Q6ZUB0 917 aa11.37□□□□□ -0.59
PTCH1-205ENST00000418258 CYLDQ9NQC7 956 aa11.37□□□□□ -0.59
PTCH1-205ENST00000418258 SLC24A2Q9UI40 661 aa11.37□□□□□ -0.59
PTCH1-205ENST00000418258 SLC27A6Q9Y2P4 619 aa11.37□□□□□ -0.59
PTCH1-205ENST00000418258 TSC22D4Q9Y3Q8 395 aa11.37□□□□□ -0.59
PTCH1-205ENST00000418258 ANKRD12Q6UB98 2062 aa11.37□□□□□ -0.59
PTCH1-205ENST00000418258 PDE2AO00408 941 aaPredicted RBP11.37□□□□□ -0.59
PTCH1-205ENST00000418258 KCNH1O95259 989 aa11.37□□□□□ -0.59
PTCH1-205ENST00000418258 NOGQ13253 232 aa11.37□□□□□ -0.59
PTCH1-205ENST00000418258 ITIH4Q14624 930 aa11.37□□□□□ -0.59
PTCH1-205ENST00000418258 SCARA3Q6AZY7 606 aa11.37□□□□□ -0.59
PTCH1-205ENST00000418258 NIPA1Q7RTP0 329 aa11.37□□□□□ -0.59
PTCH1-205ENST00000418258 EFCAB3Q8N7B9 438 aa11.37□□□□□ -0.59
PTCH1-205ENST00000418258 SELENOMQ8WWX9 145 aa11.37□□□□□ -0.59
PTCH1-205ENST00000418258 UBE2E3Q969T4 207 aa11.37□□□□□ -0.59
PTCH1-205ENST00000418258 DEFB118Q96PH6 123 aa11.37□□□□□ -0.59
PTCH1-205ENST00000418258 UGT2B28Q9BY64 529 aa11.37□□□□□ -0.59
PTCH1-205ENST00000418258 BRD9Q9H8M2 597 aa11.37□□□□□ -0.59
PTCH1-205ENST00000418258 A0A096LPK6 155 aa11.37□□□□□ -0.59
PTCH1-205ENST00000418258 KPNA5O15131 536 aa11.37□□□□□ -0.59
PTCH1-205ENST00000418258 CATP04040 527 aaKnown RBP11.37□□□□□ -0.59
PTCH1-205ENST00000418258 DNTTP04053 509 aa11.37□□□□□ -0.59
PTCH1-205ENST00000418258 NOS2P35228 1153 aa11.37□□□□□ -0.59
PTCH1-205ENST00000418258 SLC12A3P55017 1021 aa11.37□□□□□ -0.59
PTCH1-205ENST00000418258 GPR142Q7Z601 462 aa11.37□□□□□ -0.59
PTCH1-205ENST00000418258 ADGRA1Q86SQ6 560 aa11.37□□□□□ -0.59
PTCH1-205ENST00000418258 KCNQ5Q9NR82 932 aa11.37□□□□□ -0.59
PTCH1-205ENST00000418258 TBC1D3DA0A087WVF3 549 aa11.36□□□□□ -0.59
PTCH1-205ENST00000418258 TBC1D3IA0A087WXS9 549 aa11.36□□□□□ -0.59
PTCH1-205ENST00000418258 TBC1D3EA0A087X179 549 aa11.36□□□□□ -0.59
PTCH1-205ENST00000418258 TBC1D3KA0A087X1G2 549 aa11.36□□□□□ -0.59
PTCH1-205ENST00000418258 TBC1D3FA6NER0 549 aaPredicted RBP11.36□□□□□ -0.59
PTCH1-205ENST00000418258 TBC1D3LB9A6J9 549 aa11.36□□□□□ -0.59
PTCH1-205ENST00000418258 USP12O75317 370 aa11.36□□□□□ -0.59
PTCH1-205ENST00000418258 CYP1A1P04798 512 aaPredicted RBP11.36□□□□□ -0.59
PTCH1-205ENST00000418258 TBC1D3HP0C7X1 549 aa11.36□□□□□ -0.59
PTCH1-205ENST00000418258 ILF2Q12905 390 aaKnown RBP11.36□□□□□ -0.59
PTCH1-205ENST00000418258 ZCWPW2Q504Y3 356 aa11.36□□□□□ -0.59
PTCH1-205ENST00000418258 TBC1D3GQ6DHY5 549 aa11.36□□□□□ -0.59
PTCH1-205ENST00000418258 TBC1D3CQ6IPX1 549 aa11.36□□□□□ -0.59
PTCH1-205ENST00000418258 TTI2Q6NXR4 508 aa11.36□□□□□ -0.59
PTCH1-205ENST00000418258 TBC1D3Q8IZP1 549 aaPredicted RBP11.36□□□□□ -0.59
PTCH1-205ENST00000418258 KLQ9UEF7 1012 aa11.36□□□□□ -0.59
PTCH1-205ENST00000418258 IQCMA0A1B0GVH7 501 aa11.36□□□□□ -0.59
PTCH1-205ENST00000418258 RIOX2Q8IUF8 465 aa11.36□□□□□ -0.59
PTCH1-205ENST00000418258 SLC5A5Q92911 643 aa11.36□□□□□ -0.59
PTCH1-205ENST00000418258 MYLK2Q9H1R3 596 aa11.36□□□□□ -0.59
PTCH1-205ENST00000418258 TLE6Q9H808 572 aa11.36□□□□□ -0.59
PTCH1-205ENST00000418258 MYH8P13535 1937 aa11.36□□□□□ -0.59
PTCH1-205ENST00000418258 IL6P05231 212 aa11.36□□□□□ -0.59
PTCH1-205ENST00000418258 HNF4AP41235 474 aa11.36□□□□□ -0.59
PTCH1-205ENST00000418258 PRKAA2P54646 552 aa11.36□□□□□ -0.59
PTCH1-205ENST00000418258 FAM171BQ6P995 826 aa11.36□□□□□ -0.59
PTCH1-205ENST00000418258 CNSTQ6PJW8 725 aa11.36□□□□□ -0.59
PTCH1-205ENST00000418258 RASAL3Q86YV0 1011 aa11.36□□□□□ -0.59
PTCH1-205ENST00000418258 ARHGEF19Q8IW93 802 aa11.36□□□□□ -0.59
PTCH1-205ENST00000418258 FLCNQ8NFG4 579 aa11.36□□□□□ -0.59
PTCH1-205ENST00000418258 IL22Q9GZX6 179 aa11.36□□□□□ -0.59
PTCH1-205ENST00000418258 TMEM191CA6NGB0 347 aa11.36□□□□□ -0.59
PTCH1-205ENST00000418258 MIPP30301 263 aa11.36□□□□□ -0.59
PTCH1-205ENST00000418258 ABL2P42684 1182 aa11.36□□□□□ -0.59
PTCH1-205ENST00000418258 TOB1P50616 345 aaPredicted RBP11.36□□□□□ -0.59
PTCH1-205ENST00000418258 ACSM2AQ08AH3 577 aa11.36□□□□□ -0.59
PTCH1-205ENST00000418258 ACSM2BQ68CK6 577 aa11.36□□□□□ -0.59
PTCH1-205ENST00000418258 PAGE2Q7Z2X7 111 aa11.36□□□□□ -0.59
PTCH1-205ENST00000418258 OR52L1Q8NGH7 329 aa11.36□□□□□ -0.59
PTCH1-205ENST00000418258 RNF145Q96MT1 663 aa11.36□□□□□ -0.59
PTCH1-205ENST00000418258 SATB2Q9UPW6 733 aa11.36□□□□□ -0.59
PTCH1-205ENST00000418258 ISM1B1AKI9 464 aa11.36□□□□□ -0.59
PTCH1-205ENST00000418258 H0Y858 1186 aa11.36□□□□□ -0.59
PTCH1-205ENST00000418258 FTH1P02794 183 aa11.36□□□□□ -0.59
PTCH1-205ENST00000418258 TKTP29401 623 aaKnown RBP11.36□□□□□ -0.59
PTCH1-205ENST00000418258 ZSWIM7Q19AV6 140 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms