RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 PIGNO95427 931 aa14.74□□□□□ -0.05
HDAC9-208ENST00000417496 KCNE1P15382 129 aa14.74□□□□□ -0.05
HDAC9-208ENST00000417496 VCLP18206 1134 aa14.74□□□□□ -0.05
HDAC9-208ENST00000417496 TFEBP19484 476 aa14.74□□□□□ -0.05
HDAC9-208ENST00000417496 GLDCP23378 1020 aa14.74□□□□□ -0.05
HDAC9-208ENST00000417496 WARSP23381 471 aaKnown RBP14.74□□□□□ -0.05
HDAC9-208ENST00000417496 PKNOX1P55347 436 aa14.74□□□□□ -0.05
HDAC9-208ENST00000417496 DAOAP59103 153 aa14.74□□□□□ -0.05
HDAC9-208ENST00000417496 USP10Q14694 798 aaKnown RBP14.74□□□□□ -0.05
HDAC9-208ENST00000417496 POU6F1Q14863 301 aa14.74□□□□□ -0.05
HDAC9-208ENST00000417496 GRAMD1BQ3KR37 738 aa14.74□□□□□ -0.05
HDAC9-208ENST00000417496 NXNQ6DKJ4 435 aa14.74□□□□□ -0.05
HDAC9-208ENST00000417496 TWF2Q6IBS0 349 aaKnown RBP14.74□□□□□ -0.05
HDAC9-208ENST00000417496 GPR142Q7Z601 462 aa14.74□□□□□ -0.05
HDAC9-208ENST00000417496 CNTD1Q8N815 330 aa14.74□□□□□ -0.05
HDAC9-208ENST00000417496 NPLOC4Q8TAT6 608 aa14.74□□□□□ -0.05
HDAC9-208ENST00000417496 USP13Q92995 863 aaPredicted RBP14.74□□□□□ -0.05
HDAC9-208ENST00000417496 SLC10A4Q96EP9 437 aa14.74□□□□□ -0.05
HDAC9-208ENST00000417496 SCYL1Q96KG9 808 aa14.74□□□□□ -0.05
HDAC9-208ENST00000417496 GCNAQ96QF7 691 aa14.74□□□□□ -0.05
HDAC9-208ENST00000417496 ILKAPQ9H0C8 392 aaPredicted RBP14.74□□□□□ -0.05
HDAC9-208ENST00000417496 GBA3Q9H227 469 aa14.74□□□□□ -0.05
HDAC9-208ENST00000417496 RUVBL2Q9Y230 463 aaKnown RBP14.74□□□□□ -0.05
HDAC9-208ENST00000417496 RRN3P2A6NIE6 340 aa14.73□□□□□ -0.05
HDAC9-208ENST00000417496 TMEM233B4DJY2 109 aa14.73□□□□□ -0.05
HDAC9-208ENST00000417496 MATN2O00339 956 aa14.73□□□□□ -0.05
HDAC9-208ENST00000417496 LRIG2O94898 1065 aa14.73□□□□□ -0.05
HDAC9-208ENST00000417496 AHSGP02765 367 aa14.73□□□□□ -0.05
HDAC9-208ENST00000417496 ARSAP15289 507 aa14.73□□□□□ -0.05
HDAC9-208ENST00000417496 FSCBQ5H9T9 825 aa14.73□□□□□ -0.05
HDAC9-208ENST00000417496 RASIP1Q5U651 963 aa14.73□□□□□ -0.05
HDAC9-208ENST00000417496 KBTBD6Q86V97 674 aa14.73□□□□□ -0.05
HDAC9-208ENST00000417496 SLC41A1Q8IVJ1 513 aa14.73□□□□□ -0.05
HDAC9-208ENST00000417496 KCTD13Q8WZ19 329 aa14.73□□□□□ -0.05
HDAC9-208ENST00000417496 SGF29Q96ES7 293 aa14.73□□□□□ -0.05
HDAC9-208ENST00000417496 CATSPER2Q96P56 530 aa14.73□□□□□ -0.05
HDAC9-208ENST00000417496 CDRT15Q96T59 188 aa14.73□□□□□ -0.05
HDAC9-208ENST00000417496 TINF2Q9BSI4 451 aa14.73□□□□□ -0.05
HDAC9-208ENST00000417496 SIK2Q9H0K1 926 aa14.73□□□□□ -0.05
HDAC9-208ENST00000417496 WDCPQ9H6R7 721 aa14.73□□□□□ -0.05
HDAC9-208ENST00000417496 PDP2Q9P2J9 529 aa14.73□□□□□ -0.05
HDAC9-208ENST00000417496 ADAM28Q9UKQ2 775 aa14.73□□□□□ -0.05
HDAC9-208ENST00000417496 BTBD19C9JJ37 291 aa14.73□□□□□ -0.05
HDAC9-208ENST00000417496 MPOP05164 745 aa14.73□□□□□ -0.05
HDAC9-208ENST00000417496 ETS2P15036 469 aa14.73□□□□□ -0.05
HDAC9-208ENST00000417496 PIK3R1P27986 724 aa14.73□□□□□ -0.05
HDAC9-208ENST00000417496 MPP1Q00013 466 aa14.73□□□□□ -0.05
HDAC9-208ENST00000417496 MED21Q13503 144 aa14.73□□□□□ -0.05
HDAC9-208ENST00000417496 MMEL1Q495T6 779 aa14.73□□□□□ -0.05
HDAC9-208ENST00000417496 RWDD4Q6NW29 188 aaKnown RBP14.73□□□□□ -0.05
HDAC9-208ENST00000417496 FBXL19Q6PCT2 694 aa14.73□□□□□ -0.05
HDAC9-208ENST00000417496 ADGRG6Q86SQ4 1221 aa14.73□□□□□ -0.05
HDAC9-208ENST00000417496 ZC3HC1Q86WB0 502 aaKnown RBP14.73□□□□□ -0.05
HDAC9-208ENST00000417496 ZSCAN18Q8TBC5 510 aaPredicted RBP14.73□□□□□ -0.05
HDAC9-208ENST00000417496 ZCWPW1Q9H0M4 648 aa14.73□□□□□ -0.05
HDAC9-208ENST00000417496 ATXN3LQ9H3M9 355 aa14.73□□□□□ -0.05
HDAC9-208ENST00000417496 FAM96AQ9H5X1 160 aa14.73□□□□□ -0.05
HDAC9-208ENST00000417496 TLK1Q9UKI8 766 aa14.73□□□□□ -0.05
HDAC9-208ENST00000417496 PCDHGB4Q9UN71 923 aa14.73□□□□□ -0.05
HDAC9-208ENST00000417496 INPP5FQ9Y2H2 1132 aa14.73□□□□□ -0.05
HDAC9-208ENST00000417496 PCDHGB5Q9Y5G0 923 aa14.73□□□□□ -0.05
HDAC9-208ENST00000417496 GRID2O43424 1007 aa14.72□□□□□ -0.05
HDAC9-208ENST00000417496 VAPBO95292 243 aa14.72□□□□□ -0.05
HDAC9-208ENST00000417496 HOXD8P13378 290 aaPredicted RBP14.72□□□□□ -0.05
HDAC9-208ENST00000417496 GRIA2P42262 883 aa14.72□□□□□ -0.05
HDAC9-208ENST00000417496 THOP1P52888 689 aa14.72□□□□□ -0.05
HDAC9-208ENST00000417496 HNRNPDQ14103 355 aaKnown RBP14.72□□□□□ -0.05
HDAC9-208ENST00000417496 PDCD2Q16342 344 aaPredicted RBP14.72□□□□□ -0.05
HDAC9-208ENST00000417496 ZNF280DQ6N043 979 aa14.72□□□□□ -0.05
HDAC9-208ENST00000417496 CEP97Q8IW35 865 aa14.72□□□□□ -0.05
HDAC9-208ENST00000417496 MFSD6LQ8IWD5 586 aa14.72□□□□□ -0.05
HDAC9-208ENST00000417496 GALNT15Q8N3T1 639 aa14.72□□□□□ -0.05
HDAC9-208ENST00000417496 FSTL5Q8N475 847 aaPredicted RBP14.72□□□□□ -0.05
HDAC9-208ENST00000417496 TOP6BLQ8N6T0 577 aa14.72□□□□□ -0.05
HDAC9-208ENST00000417496 SENP8Q96LD8 212 aa14.72□□□□□ -0.05
HDAC9-208ENST00000417496 PAAF1Q9BRP4 392 aa14.72□□□□□ -0.05
HDAC9-208ENST00000417496 RTKNQ9BST9 563 aa14.72□□□□□ -0.05
HDAC9-208ENST00000417496 MCMBPQ9BTE3 642 aa14.72□□□□□ -0.05
HDAC9-208ENST00000417496 C1QTNF1Q9BXJ1 281 aa14.72□□□□□ -0.05
HDAC9-208ENST00000417496 SUDS3Q9H7L9 328 aaPredicted RBP14.72□□□□□ -0.05
HDAC9-208ENST00000417496 SMIM35A0A1B0GVV1 85 aa14.72□□□□□ -0.05
HDAC9-208ENST00000417496 DFFAO00273 331 aa14.72□□□□□ -0.05
HDAC9-208ENST00000417496 GABRDO14764 452 aa14.72□□□□□ -0.05
HDAC9-208ENST00000417496 TIMM44O43615 452 aa14.72□□□□□ -0.05
HDAC9-208ENST00000417496 SLC35E2BP0CK96 405 aa14.72□□□□□ -0.05
HDAC9-208ENST00000417496 UQCRBP14927 111 aa14.72□□□□□ -0.05
HDAC9-208ENST00000417496 TCN1P20061 433 aaPredicted RBP14.72□□□□□ -0.05
HDAC9-208ENST00000417496 RPL14P50914 215 aaKnown RBP14.72□□□□□ -0.05
HDAC9-208ENST00000417496 MRPS22P82650 360 aaKnown RBP14.72□□□□□ -0.05
HDAC9-208ENST00000417496 BEX3Q00994 111 aa14.72□□□□□ -0.05
HDAC9-208ENST00000417496 PAN2Q504Q3 1202 aaKnown RBP14.72□□□□□ -0.05
HDAC9-208ENST00000417496 XKR4Q5GH76 650 aa14.72□□□□□ -0.05
HDAC9-208ENST00000417496 SEL1L3Q68CR1 1132 aa14.72□□□□□ -0.05
HDAC9-208ENST00000417496 PDZD4Q76G19 769 aaPredicted RBP14.72□□□□□ -0.05
HDAC9-208ENST00000417496 DSELQ8IZU8 1212 aa14.72□□□□□ -0.05
HDAC9-208ENST00000417496 CCNYL1Q8N7R7 359 aa14.72□□□□□ -0.05
HDAC9-208ENST00000417496 FAM156AQ8NDB6 213 aa14.72□□□□□ -0.05
HDAC9-208ENST00000417496 C3orf58Q8NDZ4 430 aa14.72□□□□□ -0.05
HDAC9-208ENST00000417496 RNF34Q969K3 372 aa14.72□□□□□ -0.05
HDAC9-208ENST00000417496 RCN3Q96D15 328 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms