RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 DDX50Q9BQ39 737 aaKnown RBP13.26□□□□□ -0.29
LINC00339-202ENST00000416769 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.26□□□□□ -0.29
LINC00339-202ENST00000416769 SLC4A5Q9BY07 1137 aa13.26□□□□□ -0.29
LINC00339-202ENST00000416769 TRIM5Q9C035 493 aa13.26□□□□□ -0.29
LINC00339-202ENST00000416769 XPO4Q9C0E2 1151 aaKnown RBP13.26□□□□□ -0.29
LINC00339-202ENST00000416769 NRSN2Q9GZP1 204 aa13.26□□□□□ -0.29
LINC00339-202ENST00000416769 GRPEL1Q9HAV7 217 aa13.26□□□□□ -0.29
LINC00339-202ENST00000416769 ANLNQ9NQW6 1124 aa13.26□□□□□ -0.29
LINC00339-202ENST00000416769 CLCA2Q9UQC9 943 aa13.26□□□□□ -0.29
LINC00339-202ENST00000416769 TENM4Q6N022 2769 aa13.25□□□□□ -0.29
LINC00339-202ENST00000416769 LY6G6EA0A0G2JKS1 128 aa13.25□□□□□ -0.29
LINC00339-202ENST00000416769 A0A1W2PQC6 194 aa13.25□□□□□ -0.29
LINC00339-202ENST00000416769 PMS2P1A4D2B8 440 aa13.25□□□□□ -0.29
LINC00339-202ENST00000416769 F5H5T6 163 aa13.25□□□□□ -0.29
LINC00339-202ENST00000416769 I6L893 689 aaPredicted RBP13.25□□□□□ -0.29
LINC00339-202ENST00000416769 K7ERQ8 282 aa13.25□□□□□ -0.29
LINC00339-202ENST00000416769 SLC31A1O15431 190 aa13.25□□□□□ -0.29
LINC00339-202ENST00000416769 SNAP91O60641 907 aa13.25□□□□□ -0.29
LINC00339-202ENST00000416769 MOCS3O95396 460 aa13.25□□□□□ -0.29
LINC00339-202ENST00000416769 MPOP05164 745 aa13.25□□□□□ -0.29
LINC00339-202ENST00000416769 C1SP09871 688 aa13.25□□□□□ -0.29
LINC00339-202ENST00000416769 KRT5P13647 590 aa13.25□□□□□ -0.29
LINC00339-202ENST00000416769 SLC9A1P19634 815 aa13.25□□□□□ -0.29
LINC00339-202ENST00000416769 PON1P27169 355 aa13.25□□□□□ -0.29
LINC00339-202ENST00000416769 CXADRP78310 365 aa13.25□□□□□ -0.29
LINC00339-202ENST00000416769 NNTQ13423 1086 aa13.25□□□□□ -0.29
LINC00339-202ENST00000416769 ACCSLQ4AC99 568 aa13.25□□□□□ -0.29
LINC00339-202ENST00000416769 PIP5KL1Q5T9C9 394 aa13.25□□□□□ -0.29
LINC00339-202ENST00000416769 OTUD1Q5VV17 481 aaPredicted RBP13.25□□□□□ -0.29
LINC00339-202ENST00000416769 LRRC69Q6ZNQ3 347 aa13.25□□□□□ -0.29
LINC00339-202ENST00000416769 TMC6Q7Z403 805 aa13.25□□□□□ -0.29
LINC00339-202ENST00000416769 DCBLD1Q8N8Z6 715 aa13.25□□□□□ -0.29
LINC00339-202ENST00000416769 RFFLQ8WZ73 363 aa13.25□□□□□ -0.29
LINC00339-202ENST00000416769 ARRDC3Q96B67 414 aa13.25□□□□□ -0.29
LINC00339-202ENST00000416769 SKA1Q96BD8 255 aa13.25□□□□□ -0.29
LINC00339-202ENST00000416769 SPAG5Q96R06 1193 aa13.25□□□□□ -0.29
LINC00339-202ENST00000416769 CRACR2AQ9BSW2 395 aa13.25□□□□□ -0.29
LINC00339-202ENST00000416769 IRX2Q9BZI1 471 aaPredicted RBP13.25□□□□□ -0.29
LINC00339-202ENST00000416769 SEMA4CQ9C0C4 833 aa13.25□□□□□ -0.29
LINC00339-202ENST00000416769 ERVMER34-1Q9H9K5 563 aa13.25□□□□□ -0.29
LINC00339-202ENST00000416769 CPNE5Q9HCH3 593 aa13.25□□□□□ -0.29
LINC00339-202ENST00000416769 PPM1HQ9ULR3 514 aa13.25□□□□□ -0.29
LINC00339-202ENST00000416769 OR51B4Q9Y5P0 310 aa13.25□□□□□ -0.29
LINC00339-202ENST00000416769 U3KQA8 63 aa13.25□□□□□ -0.29
LINC00339-202ENST00000416769 RP1P56715 2156 aa13.25□□□□□ -0.29
LINC00339-202ENST00000416769 TRPM6Q9BX84 2022 aa13.24□□□□□ -0.29
LINC00339-202ENST00000416769 A0A1B0GVM2 712 aa13.24□□□□□ -0.29
LINC00339-202ENST00000416769 A0A1W2PNU3 283 aaPredicted RBP13.24□□□□□ -0.29
LINC00339-202ENST00000416769 KCNU1A8MYU2 1149 aa13.24□□□□□ -0.29
LINC00339-202ENST00000416769 CAPN9O14815 690 aa13.24□□□□□ -0.29
LINC00339-202ENST00000416769 YKT6O15498 198 aa13.24□□□□□ -0.29
LINC00339-202ENST00000416769 RNGTTO60942 597 aaKnown RBP13.24□□□□□ -0.29
LINC00339-202ENST00000416769 NEBLO76041 1014 aa13.24□□□□□ -0.29
LINC00339-202ENST00000416769 MT-CO3P00414 261 aa13.24□□□□□ -0.29
LINC00339-202ENST00000416769 TFE3P19532 575 aaPredicted RBP13.24□□□□□ -0.29
LINC00339-202ENST00000416769 DGKAP23743 735 aa13.24□□□□□ -0.29
LINC00339-202ENST00000416769 ACP1P24666 158 aa13.24□□□□□ -0.29
LINC00339-202ENST00000416769 PBX1P40424 430 aa13.24□□□□□ -0.29
LINC00339-202ENST00000416769 SYCP1Q15431 976 aa13.24□□□□□ -0.29
LINC00339-202ENST00000416769 DLG2Q15700 870 aa13.24□□□□□ -0.29
LINC00339-202ENST00000416769 TBC1D25Q3MII6 688 aa13.24□□□□□ -0.29
LINC00339-202ENST00000416769 SEL1L3Q68CR1 1132 aa13.24□□□□□ -0.29
LINC00339-202ENST00000416769 DPY19L2P1Q6NXN4 242 aa13.24□□□□□ -0.29
LINC00339-202ENST00000416769 PRPF39Q86UA1 669 aaKnown RBP13.24□□□□□ -0.29
LINC00339-202ENST00000416769 TRIM69Q86WT6 500 aa13.24□□□□□ -0.29
LINC00339-202ENST00000416769 PASD1Q8IV76 773 aa13.24□□□□□ -0.29
LINC00339-202ENST00000416769 CCDC117Q8IWD4 279 aaPredicted RBP13.24□□□□□ -0.29
LINC00339-202ENST00000416769 DEFB106AQ8N104 65 aa13.24□□□□□ -0.29
LINC00339-202ENST00000416769 SLC22A18ASQ8N1D0 253 aa13.24□□□□□ -0.29
LINC00339-202ENST00000416769 WDTC1Q8N5D0 677 aa13.24□□□□□ -0.29
LINC00339-202ENST00000416769 ZNF557Q8N988 423 aaPredicted RBP13.24□□□□□ -0.29
LINC00339-202ENST00000416769 TMEM145Q8NBT3 493 aa13.24□□□□□ -0.29
LINC00339-202ENST00000416769 CHST14Q8NCH0 376 aa13.24□□□□□ -0.29
LINC00339-202ENST00000416769 OR13H1Q8NG92 308 aa13.24□□□□□ -0.29
LINC00339-202ENST00000416769 OR8D1Q8WZ84 308 aa13.24□□□□□ -0.29
LINC00339-202ENST00000416769 FGF11Q92914 225 aa13.24□□□□□ -0.29
LINC00339-202ENST00000416769 BTN2A3PQ96KV6 586 aa13.24□□□□□ -0.29
LINC00339-202ENST00000416769 FAM81BQ96LP2 452 aa13.24□□□□□ -0.29
LINC00339-202ENST00000416769 PSMB7Q99436 277 aa13.24□□□□□ -0.29
LINC00339-202ENST00000416769 INTS2Q9H0H0 1204 aaKnown RBP13.24□□□□□ -0.29
LINC00339-202ENST00000416769 FAM204AQ9H8W3 233 aa13.24□□□□□ -0.29
LINC00339-202ENST00000416769 PLCB1Q9NQ66 1216 aa13.24□□□□□ -0.29
LINC00339-202ENST00000416769 TMPRSS4Q9NRS4 437 aa13.24□□□□□ -0.29
LINC00339-202ENST00000416769 AJAP1Q9UKB5 411 aaPredicted RBP13.24□□□□□ -0.29
LINC00339-202ENST00000416769 VANGL2Q9ULK5 521 aa13.24□□□□□ -0.29
LINC00339-202ENST00000416769 SIK3Q9Y2K2 1263 aa13.24□□□□□ -0.29
LINC00339-202ENST00000416769 DAAM1Q9Y4D1 1078 aa13.24□□□□□ -0.29
LINC00339-202ENST00000416769 A0A1W2PQU0 124 aa13.23□□□□□ -0.29
LINC00339-202ENST00000416769 RRP8O43159 456 aaKnown RBP13.23□□□□□ -0.29
LINC00339-202ENST00000416769 SMAD6O43541 496 aaKnown RBP13.23□□□□□ -0.29
LINC00339-202ENST00000416769 ATP9BO43861 1147 aa13.23□□□□□ -0.29
LINC00339-202ENST00000416769 CNTN5O94779 1100 aa13.23□□□□□ -0.29
LINC00339-202ENST00000416769 THEGLP0DJG4 465 aa13.23□□□□□ -0.29
LINC00339-202ENST00000416769 ZNF75DP51815 510 aa13.23□□□□□ -0.29
LINC00339-202ENST00000416769 PDCLQ13371 301 aa13.23□□□□□ -0.29
LINC00339-202ENST00000416769 AUHQ13825 339 aaKnown RBP13.23□□□□□ -0.29
LINC00339-202ENST00000416769 STAT4Q14765 748 aa13.23□□□□□ -0.29
LINC00339-202ENST00000416769 ALFQ53S48 1182 aa13.23□□□□□ -0.29
LINC00339-202ENST00000416769 SLC45A4Q5BKX6 768 aa13.23□□□□□ -0.29
LINC00339-202ENST00000416769 TPRG1LQ5T0D9 272 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms