RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 TLL1O43897 1013 aa11.82□□□□□ -0.52
RFFL-205ENST00000415395 MFSD11O43934 449 aa11.82□□□□□ -0.52
RFFL-205ENST00000415395 PAGE1O75459 146 aa11.82□□□□□ -0.52
RFFL-205ENST00000415395 FAM155BO75949 473 aa11.82□□□□□ -0.52
RFFL-205ENST00000415395 LRIG2O94898 1065 aa11.82□□□□□ -0.52
RFFL-205ENST00000415395 CBX6O95503 412 aa11.82□□□□□ -0.52
RFFL-205ENST00000415395 IGLV3-27P01718 113 aa11.82□□□□□ -0.52
RFFL-205ENST00000415395 MX2P20592 715 aa11.82□□□□□ -0.52
RFFL-205ENST00000415395 SSTR1P30872 391 aa11.82□□□□□ -0.52
RFFL-205ENST00000415395 PTDSS1P48651 473 aaKnown RBP11.82□□□□□ -0.52
RFFL-205ENST00000415395 BASP1P80723 227 aaKnown RBP11.82□□□□□ -0.52
RFFL-205ENST00000415395 UBE3AQ05086 875 aa11.82□□□□□ -0.52
RFFL-205ENST00000415395 SLC18A2Q05940 514 aa11.82□□□□□ -0.52
RFFL-205ENST00000415395 ZNF33AQ06730 810 aa11.82□□□□□ -0.52
RFFL-205ENST00000415395 SLC10A2Q12908 348 aaPredicted RBP11.82□□□□□ -0.52
RFFL-205ENST00000415395 DBN1Q16643 649 aa11.82□□□□□ -0.52
RFFL-205ENST00000415395 HP1BP3Q5SSJ5 553 aaPredicted RBP11.82□□□□□ -0.52
RFFL-205ENST00000415395 FAM72AQ5TYM5 149 aa11.82□□□□□ -0.52
RFFL-205ENST00000415395 RASIP1Q5U651 963 aa11.82□□□□□ -0.52
RFFL-205ENST00000415395 MANEALQ5VSG8 457 aa11.82□□□□□ -0.52
RFFL-205ENST00000415395 TTC39BQ5VTQ0 682 aaPredicted RBP11.82□□□□□ -0.52
RFFL-205ENST00000415395 HEATR6Q6AI08 1181 aaKnown RBP11.82□□□□□ -0.52
RFFL-205ENST00000415395 FAM72DQ6L9T8 149 aa11.82□□□□□ -0.52
RFFL-205ENST00000415395 ITIH5Q86UX2 942 aa11.82□□□□□ -0.52
RFFL-205ENST00000415395 FAM72BQ86X60 149 aa11.82□□□□□ -0.52
RFFL-205ENST00000415395 LZTR1Q8N653 840 aa11.82□□□□□ -0.52
RFFL-205ENST00000415395 ATP6V0D2Q8N8Y2 350 aa11.82□□□□□ -0.52
RFFL-205ENST00000415395 STKLD1Q8NE28 680 aa11.82□□□□□ -0.52
RFFL-205ENST00000415395 MZB1Q8WU39 189 aa11.82□□□□□ -0.52
RFFL-205ENST00000415395 TFB1MQ8WVM0 346 aaKnown RBP11.82□□□□□ -0.52
RFFL-205ENST00000415395 SLC44A1Q8WWI5 657 aa11.82□□□□□ -0.52
RFFL-205ENST00000415395 MTBPQ96DY7 904 aa11.82□□□□□ -0.52
RFFL-205ENST00000415395 FCRL2Q96LA5 508 aaPredicted RBP11.82□□□□□ -0.52
RFFL-205ENST00000415395 LBHD1Q9BQE6 289 aaPredicted RBP11.82□□□□□ -0.52
RFFL-205ENST00000415395 SIKE1Q9BRV8 207 aa11.82□□□□□ -0.52
RFFL-205ENST00000415395 CATSPERBQ9H7T0 1116 aa11.82□□□□□ -0.52
RFFL-205ENST00000415395 ETNK2Q9NVF9 386 aa11.82□□□□□ -0.52
RFFL-205ENST00000415395 MARCH2Q9P0N8 246 aa11.82□□□□□ -0.52
RFFL-205ENST00000415395 HEY2Q9UBP5 337 aa11.82□□□□□ -0.52
RFFL-205ENST00000415395 ZNF180Q9UJW8 692 aa11.82□□□□□ -0.52
RFFL-205ENST00000415395 LRCH1Q9Y2L9 728 aa11.82□□□□□ -0.52
RFFL-205ENST00000415395 ASB3Q9Y575 518 aa11.82□□□□□ -0.52
RFFL-205ENST00000415395 ANAPC1Q9H1A4 1944 aa11.82□□□□□ -0.52
RFFL-205ENST00000415395 MTCL1Q9Y4B5 1905 aaKnown RBP11.81□□□□□ -0.52
RFFL-205ENST00000415395 A6NHS1 94 aa11.81□□□□□ -0.52
RFFL-205ENST00000415395 COPEO14579 308 aa11.81□□□□□ -0.52
RFFL-205ENST00000415395 PRRG1O14668 218 aa11.81□□□□□ -0.52
RFFL-205ENST00000415395 TRDMT1O14717 391 aaKnown RBP11.81□□□□□ -0.52
RFFL-205ENST00000415395 TEX28O15482 410 aa11.81□□□□□ -0.52
RFFL-205ENST00000415395 KCNN4O15554 427 aa11.81□□□□□ -0.52
RFFL-205ENST00000415395 MTSS1O43312 755 aa11.81□□□□□ -0.52
RFFL-205ENST00000415395 MSI1O43347 362 aaKnown RBP11.81□□□□□ -0.52
RFFL-205ENST00000415395 TLR5O60602 858 aa11.81□□□□□ -0.52
RFFL-205ENST00000415395 OBSL1O75147 1896 aa11.81□□□□□ -0.52
RFFL-205ENST00000415395 GCATO75600 419 aa11.81□□□□□ -0.52
RFFL-205ENST00000415395 CIB2O75838 187 aa11.81□□□□□ -0.52
RFFL-205ENST00000415395 C1RP00736 705 aa11.81□□□□□ -0.52
RFFL-205ENST00000415395 DHRS4L1P0CG22 281 aa11.81□□□□□ -0.52
RFFL-205ENST00000415395 HMGA1P17096 107 aaKnown RBP11.81□□□□□ -0.52
RFFL-205ENST00000415395 RBL1P28749 1068 aa11.81□□□□□ -0.52
RFFL-205ENST00000415395 BMPR1AP36894 532 aa11.81□□□□□ -0.52
RFFL-205ENST00000415395 NEK3P51956 506 aa11.81□□□□□ -0.52
RFFL-205ENST00000415395 EPHB3P54753 998 aa11.81□□□□□ -0.52
RFFL-205ENST00000415395 MLLT6P55198 1093 aaPredicted RBP11.81□□□□□ -0.52
RFFL-205ENST00000415395 EFEMP1Q12805 493 aa11.81□□□□□ -0.52
RFFL-205ENST00000415395 PRKD1Q15139 912 aaPredicted RBP11.81□□□□□ -0.52
RFFL-205ENST00000415395 C10orf120Q5SQS8 335 aa11.81□□□□□ -0.52
RFFL-205ENST00000415395 TRIM68Q6AZZ1 485 aa11.81□□□□□ -0.52
RFFL-205ENST00000415395 RTL10Q7L3V2 364 aa11.81□□□□□ -0.52
RFFL-205ENST00000415395 SLC26A11Q86WA9 606 aa11.81□□□□□ -0.52
RFFL-205ENST00000415395 KLHL23Q8NBE8 558 aa11.81□□□□□ -0.52
RFFL-205ENST00000415395 CCDC110Q8TBZ0 833 aa11.81□□□□□ -0.52
RFFL-205ENST00000415395 LRRC39Q96DD0 335 aa11.81□□□□□ -0.52
RFFL-205ENST00000415395 PTCD3Q96EY7 689 aaKnown RBP11.81□□□□□ -0.52
RFFL-205ENST00000415395 BTN2A3PQ96KV6 586 aa11.81□□□□□ -0.52
RFFL-205ENST00000415395 TMEM120AQ9BXJ8 343 aa11.81□□□□□ -0.52
RFFL-205ENST00000415395 WWP1Q9H0M0 922 aa11.81□□□□□ -0.52
RFFL-205ENST00000415395 DENND2DQ9H6A0 471 aaPredicted RBP11.81□□□□□ -0.52
RFFL-205ENST00000415395 MKS1Q9NXB0 559 aa11.81□□□□□ -0.52
RFFL-205ENST00000415395 KCNK4Q9NYG8 393 aa11.81□□□□□ -0.52
RFFL-205ENST00000415395 TRPM5Q9NZQ8 1165 aa11.81□□□□□ -0.52
RFFL-205ENST00000415395 NKX1-2Q9UD57 310 aaPredicted RBP11.81□□□□□ -0.52
RFFL-205ENST00000415395 ZNF212Q9UDV6 495 aa11.81□□□□□ -0.52
RFFL-205ENST00000415395 DNMT3LQ9UJW3 386 aa11.81□□□□□ -0.52
RFFL-205ENST00000415395 INSL5Q9Y5Q6 135 aa11.81□□□□□ -0.52
RFFL-205ENST00000415395 WASH4PA8MWX3 477 aa11.8□□□□□ -0.52
RFFL-205ENST00000415395 F8W8V4 182 aa11.8□□□□□ -0.52
RFFL-205ENST00000415395 STK10O94804 968 aaKnown RBP11.8□□□□□ -0.52
RFFL-205ENST00000415395 ADH1AP07327 375 aa11.8□□□□□ -0.52
RFFL-205ENST00000415395 DNAJB2P25686 324 aa11.8□□□□□ -0.52
RFFL-205ENST00000415395 ATP5C1P36542 298 aaKnown RBP11.8□□□□□ -0.52
RFFL-205ENST00000415395 OCRLQ01968 901 aa11.8□□□□□ -0.52
RFFL-205ENST00000415395 SLC34A1Q06495 639 aa11.8□□□□□ -0.52
RFFL-205ENST00000415395 TAF12Q16514 161 aa11.8□□□□□ -0.52
RFFL-205ENST00000415395 CTC1Q2NKJ3 1217 aa11.8□□□□□ -0.52
RFFL-205ENST00000415395 DNAL1Q4LDG9 190 aa11.8□□□□□ -0.52
RFFL-205ENST00000415395 FNBP1LQ5T0N5 605 aa11.8□□□□□ -0.52
RFFL-205ENST00000415395 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.8□□□□□ -0.52
RFFL-205ENST00000415395 PSMG2Q969U7 264 aa11.8□□□□□ -0.52
RFFL-205ENST00000415395 SKA1Q96BD8 255 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms