RNA–Protein interactions for RNA: ENST00000415164.5

UBXN4-202, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-202ENST00000415164 FGF11Q92914 225 aa19.81■□□□□ 0.76
UBXN4-202ENST00000415164 FAM131CQ96AQ9 280 aa19.81■□□□□ 0.76
UBXN4-202ENST00000415164 TNKS2Q9H2K2 1166 aa19.81■□□□□ 0.76
UBXN4-202ENST00000415164 PRORYQ9H606 182 aa19.81■□□□□ 0.76
UBXN4-202ENST00000415164 CAAP1Q9H8G2 361 aa19.81■□□□□ 0.76
UBXN4-202ENST00000415164 PLCB1Q9NQ66 1216 aa19.81■□□□□ 0.76
UBXN4-202ENST00000415164 CTSLP07711 333 aa19.8■□□□□ 0.76
UBXN4-202ENST00000415164 MYF5P13349 255 aa19.8■□□□□ 0.76
UBXN4-202ENST00000415164 DGKAP23743 735 aa19.8■□□□□ 0.76
UBXN4-202ENST00000415164 KRT9P35527 623 aa19.8■□□□□ 0.76
UBXN4-202ENST00000415164 SULT1E1P49888 294 aa19.8■□□□□ 0.76
UBXN4-202ENST00000415164 MARSP56192 900 aaKnown RBP19.8■□□□□ 0.76
UBXN4-202ENST00000415164 E2F1Q01094 437 aa19.8■□□□□ 0.76
UBXN4-202ENST00000415164 KCNMA1Q12791 1236 aa19.8■□□□□ 0.76
UBXN4-202ENST00000415164 ZNF542PQ5EBM4 170 aa19.8■□□□□ 0.76
UBXN4-202ENST00000415164 PIP5KL1Q5T9C9 394 aa19.8■□□□□ 0.76
UBXN4-202ENST00000415164 GBP6Q6ZN66 633 aa19.8■□□□□ 0.76
UBXN4-202ENST00000415164 TFAP2DQ7Z6R9 452 aa19.8■□□□□ 0.76
UBXN4-202ENST00000415164 SLC25A45Q8N413 288 aa19.8■□□□□ 0.76
UBXN4-202ENST00000415164 OR13H1Q8NG92 308 aa19.8■□□□□ 0.76
UBXN4-202ENST00000415164 ARRDC3Q96B67 414 aa19.8■□□□□ 0.76
UBXN4-202ENST00000415164 FAM81BQ96LP2 452 aa19.8■□□□□ 0.76
UBXN4-202ENST00000415164 C2orf49Q9BVC5 232 aaPredicted RBP19.8■□□□□ 0.76
UBXN4-202ENST00000415164 TKTL2Q9H0I9 626 aa19.8■□□□□ 0.76
UBXN4-202ENST00000415164 PDCL3Q9H2J4 239 aa19.8■□□□□ 0.76
UBXN4-202ENST00000415164 APEX2Q9UBZ4 518 aa19.8■□□□□ 0.76
UBXN4-202ENST00000415164 VPS51Q9UID3 782 aa19.8■□□□□ 0.76
UBXN4-202ENST00000415164 PCDHB1Q9Y5F3 818 aa19.8■□□□□ 0.76
UBXN4-202ENST00000415164 ALPPL2P10696 532 aa19.79■□□□□ 0.76
UBXN4-202ENST00000415164 RECQLP46063 649 aaPredicted RBP19.79■□□□□ 0.76
UBXN4-202ENST00000415164 SNX16P57768 344 aa19.79■□□□□ 0.76
UBXN4-202ENST00000415164 CXADRP78310 365 aa19.79■□□□□ 0.76
UBXN4-202ENST00000415164 SLC6A3Q01959 620 aa19.79■□□□□ 0.76
UBXN4-202ENST00000415164 PTK2Q05397 1052 aa19.79■□□□□ 0.76
UBXN4-202ENST00000415164 CCDC15Q0P6D6 951 aa19.79■□□□□ 0.76
UBXN4-202ENST00000415164 MAPK8IP2Q13387 824 aaPredicted RBP19.79■□□□□ 0.76
UBXN4-202ENST00000415164 ZNF211Q13398 564 aaPredicted RBP19.79■□□□□ 0.76
UBXN4-202ENST00000415164 ALFQ53S48 1182 aa19.79■□□□□ 0.76
UBXN4-202ENST00000415164 OLFML1Q6UWY5 402 aa19.79■□□□□ 0.76
UBXN4-202ENST00000415164 PTAR1Q7Z6K3 402 aaPredicted RBP19.79■□□□□ 0.76
UBXN4-202ENST00000415164 HORMAD1Q86X24 394 aa19.79■□□□□ 0.76
UBXN4-202ENST00000415164 CHST14Q8NCH0 376 aa19.79■□□□□ 0.76
UBXN4-202ENST00000415164 SNIP1Q8TAD8 396 aaKnown RBP19.79■□□□□ 0.76
UBXN4-202ENST00000415164 PSMB7Q99436 277 aa19.79■□□□□ 0.76
UBXN4-202ENST00000415164 LGMNQ99538 433 aa19.79■□□□□ 0.76
UBXN4-202ENST00000415164 OSBPL2Q9H1P3 480 aa19.79■□□□□ 0.76
UBXN4-202ENST00000415164 WDCPQ9H6R7 721 aa19.79■□□□□ 0.76
UBXN4-202ENST00000415164 PIGVQ9NUD9 493 aa19.79■□□□□ 0.76
UBXN4-202ENST00000415164 OR51B4Q9Y5P0 310 aa19.79■□□□□ 0.76
UBXN4-202ENST00000415164 ASXL3Q9C0F0 2248 aa19.79■□□□□ 0.76
UBXN4-202ENST00000415164 PRNPP04156 253 aa19.78■□□□□ 0.76
UBXN4-202ENST00000415164 HNRNPA2B1P22626 353 aaKnown RBP19.78■□□□□ 0.76
UBXN4-202ENST00000415164 NOS2P35228 1153 aa19.78■□□□□ 0.76
UBXN4-202ENST00000415164 VASPP50552 380 aaPredicted RBP19.78■□□□□ 0.76
UBXN4-202ENST00000415164 DNA2P51530 1060 aa19.78■□□□□ 0.76
UBXN4-202ENST00000415164 MTA1Q13330 715 aa19.78■□□□□ 0.76
UBXN4-202ENST00000415164 EXOC3L4Q17RC7 722 aa19.78■□□□□ 0.76
UBXN4-202ENST00000415164 PTPN20Q4JDL3 420 aa19.78■□□□□ 0.76
UBXN4-202ENST00000415164 ARSIQ5FYB1 569 aa19.78■□□□□ 0.76
UBXN4-202ENST00000415164 SEL1L3Q68CR1 1132 aa19.78■□□□□ 0.76
UBXN4-202ENST00000415164 FOXR2Q6PJQ5 311 aa19.78■□□□□ 0.76
UBXN4-202ENST00000415164 ELOA2Q8IYF1 753 aaPredicted RBP19.78■□□□□ 0.76
UBXN4-202ENST00000415164 DCBLD1Q8N8Z6 715 aa19.78■□□□□ 0.76
UBXN4-202ENST00000415164 OR2A12Q8NGT7 310 aa19.78■□□□□ 0.76
UBXN4-202ENST00000415164 OR4C6Q8NH72 309 aa19.78■□□□□ 0.76
UBXN4-202ENST00000415164 SPON2Q9BUD6 331 aa19.78■□□□□ 0.76
UBXN4-202ENST00000415164 KLHL11Q9NVR0 708 aa19.78■□□□□ 0.76
UBXN4-202ENST00000415164 DNAJC28Q9NX36 388 aa19.78■□□□□ 0.76
UBXN4-202ENST00000415164 IL36AQ9UHA7 158 aa19.78■□□□□ 0.76
UBXN4-202ENST00000415164 HS3ST2Q9Y278 367 aa19.78■□□□□ 0.76
UBXN4-202ENST00000415164 TBC1D30Q9Y2I9 924 aa19.78■□□□□ 0.76
UBXN4-202ENST00000415164 ATXN7O15265 892 aaPredicted RBP19.77■□□□□ 0.76
UBXN4-202ENST00000415164 SMAD6O43541 496 aaKnown RBP19.77■□□□□ 0.76
UBXN4-202ENST00000415164 MPOP05164 745 aa19.77■□□□□ 0.76
UBXN4-202ENST00000415164 PNMA6AP0CW24 399 aaPredicted RBP19.77■□□□□ 0.76
UBXN4-202ENST00000415164 TFE3P19532 575 aaPredicted RBP19.77■□□□□ 0.76
UBXN4-202ENST00000415164 MTIF2P46199 727 aaKnown RBP19.77■□□□□ 0.76
UBXN4-202ENST00000415164 DEUP1Q05D60 604 aa19.77■□□□□ 0.76
UBXN4-202ENST00000415164 BECN1Q14457 450 aa19.77■□□□□ 0.76
UBXN4-202ENST00000415164 ZNF284Q2VY69 593 aa19.77■□□□□ 0.76
UBXN4-202ENST00000415164 TBC1D25Q3MII6 688 aa19.77■□□□□ 0.76
UBXN4-202ENST00000415164 C22orf39Q6P5X5 142 aa19.77■□□□□ 0.76
UBXN4-202ENST00000415164 LRRC31Q6UY01 552 aa19.77■□□□□ 0.76
UBXN4-202ENST00000415164 ERN2Q76MJ5 926 aaKnown RBP19.77■□□□□ 0.76
UBXN4-202ENST00000415164 GPR155Q7Z3F1 870 aa19.77■□□□□ 0.76
UBXN4-202ENST00000415164 TMEM145Q8NBT3 493 aa19.77■□□□□ 0.76
UBXN4-202ENST00000415164 PPP1R16AQ96I34 528 aa19.77■□□□□ 0.76
UBXN4-202ENST00000415164 ABCG4Q9H172 646 aa19.77■□□□□ 0.76
UBXN4-202ENST00000415164 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.77■□□□□ 0.76
UBXN4-202ENST00000415164 MPP6Q9NZW5 540 aa19.77■□□□□ 0.76
UBXN4-202ENST00000415164 STAP1Q9ULZ2 295 aa19.77■□□□□ 0.76
UBXN4-202ENST00000415164 PCDHGC3Q9UN70 934 aa19.77■□□□□ 0.76
UBXN4-202ENST00000415164 KNTC1P50748 2209 aa19.77■□□□□ 0.76
UBXN4-202ENST00000415164 GCN1Q92616 2671 aaKnown RBP19.77■□□□□ 0.75
UBXN4-202ENST00000415164 A0A0D9SEW6 157 aa19.76■□□□□ 0.75
UBXN4-202ENST00000415164 RNF103O00237 685 aa19.76■□□□□ 0.75
UBXN4-202ENST00000415164 SRGAP2O75044 1071 aa19.76■□□□□ 0.75
UBXN4-202ENST00000415164 PIAS2O75928 621 aa19.76■□□□□ 0.75
UBXN4-202ENST00000415164 GCNT7Q6ZNI0 430 aa19.76■□□□□ 0.75
UBXN4-202ENST00000415164 Q6ZSR6 202 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms