RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 PCDHGC3Q9UN70 934 aa13.97□□□□□ -0.17
RAPGEF1-204ENST00000414781 SATB2Q9UPW6 733 aa13.97□□□□□ -0.17
RAPGEF1-204ENST00000414781 EPN1Q9Y6I3 576 aaPredicted RBP13.97□□□□□ -0.17
RAPGEF1-204ENST00000414781 CDRT15L2A8MXV6 281 aa13.96□□□□□ -0.17
RAPGEF1-204ENST00000414781 CLDN5O00501 218 aa13.96□□□□□ -0.17
RAPGEF1-204ENST00000414781 TRIM38O00635 465 aa13.96□□□□□ -0.17
RAPGEF1-204ENST00000414781 CKMT1AP12532 417 aa13.96□□□□□ -0.17
RAPGEF1-204ENST00000414781 GZMAP12544 262 aa13.96□□□□□ -0.17
RAPGEF1-204ENST00000414781 DUSP3P51452 185 aaPredicted RBP13.96□□□□□ -0.17
RAPGEF1-204ENST00000414781 GALCP54803 685 aa13.96□□□□□ -0.17
RAPGEF1-204ENST00000414781 OVGP1Q12889 678 aa13.96□□□□□ -0.17
RAPGEF1-204ENST00000414781 SLC18A3Q16572 532 aa13.96□□□□□ -0.17
RAPGEF1-204ENST00000414781 ISXQ2M1V0 245 aa13.96□□□□□ -0.17
RAPGEF1-204ENST00000414781 C3orf38Q5JPI3 329 aa13.96□□□□□ -0.17
RAPGEF1-204ENST00000414781 E4F1Q66K89 784 aaPredicted RBP13.96□□□□□ -0.17
RAPGEF1-204ENST00000414781 NCEH1Q6PIU2 408 aa13.96□□□□□ -0.17
RAPGEF1-204ENST00000414781 ZNF571Q7Z3V5 609 aaPredicted RBP13.96□□□□□ -0.17
RAPGEF1-204ENST00000414781 CLEC14AQ86T13 490 aa13.96□□□□□ -0.17
RAPGEF1-204ENST00000414781 FAM35AQ86V20 835 aa13.96□□□□□ -0.17
RAPGEF1-204ENST00000414781 IQCHQ86VS3 1027 aa13.96□□□□□ -0.17
RAPGEF1-204ENST00000414781 MFSD2AQ8NA29 543 aa13.96□□□□□ -0.17
RAPGEF1-204ENST00000414781 TMEM35BQ8NCS4 154 aa13.96□□□□□ -0.17
RAPGEF1-204ENST00000414781 MSANTD4Q8NCY6 345 aa13.96□□□□□ -0.17
RAPGEF1-204ENST00000414781 OR4C6Q8NH72 309 aa13.96□□□□□ -0.17
RAPGEF1-204ENST00000414781 WFIKKN2Q8TEU8 576 aa13.96□□□□□ -0.17
RAPGEF1-204ENST00000414781 P2RY11Q96G91 374 aa13.96□□□□□ -0.17
RAPGEF1-204ENST00000414781 DCLK3Q9C098 648 aa13.96□□□□□ -0.17
RAPGEF1-204ENST00000414781 MIS12Q9H081 205 aa13.96□□□□□ -0.17
RAPGEF1-204ENST00000414781 PABPC3Q9H361 631 aaKnown RBP13.96□□□□□ -0.17
RAPGEF1-204ENST00000414781 PRSS16Q9NQE7 514 aa13.96□□□□□ -0.17
RAPGEF1-204ENST00000414781 SEPT11Q9NVA2 429 aaKnown RBP13.96□□□□□ -0.17
RAPGEF1-204ENST00000414781 HMGXB4Q9UGU5 601 aa13.96□□□□□ -0.17
RAPGEF1-204ENST00000414781 EIF3CLB5ME19 914 aaKnown RBP13.95□□□□□ -0.18
RAPGEF1-204ENST00000414781 O00370 1275 aa13.95□□□□□ -0.18
RAPGEF1-204ENST00000414781 FAM87AP0C7U9 286 aa13.95□□□□□ -0.18
RAPGEF1-204ENST00000414781 SETSIPP0DME0 302 aa13.95□□□□□ -0.18
RAPGEF1-204ENST00000414781 BRD2P25440 801 aaKnown RBP13.95□□□□□ -0.18
RAPGEF1-204ENST00000414781 KIF11P52732 1056 aa13.95□□□□□ -0.18
RAPGEF1-204ENST00000414781 FOXK1P85037 733 aa13.95□□□□□ -0.18
RAPGEF1-204ENST00000414781 TAF3Q5VWG9 929 aa13.95□□□□□ -0.18
RAPGEF1-204ENST00000414781 TMEM215Q68D42 235 aa13.95□□□□□ -0.18
RAPGEF1-204ENST00000414781 C12orf29Q8N999 325 aa13.95□□□□□ -0.18
RAPGEF1-204ENST00000414781 ANKRD52Q8NB46 1076 aa13.95□□□□□ -0.18
RAPGEF1-204ENST00000414781 TFAP2BQ92481 460 aa13.95□□□□□ -0.18
RAPGEF1-204ENST00000414781 EXTL1Q92935 676 aa13.95□□□□□ -0.18
RAPGEF1-204ENST00000414781 LIN37Q96GY3 246 aaPredicted RBP13.95□□□□□ -0.18
RAPGEF1-204ENST00000414781 EIF3CQ99613 913 aaKnown RBP13.95□□□□□ -0.18
RAPGEF1-204ENST00000414781 MED10Q9BTT4 135 aa13.95□□□□□ -0.18
RAPGEF1-204ENST00000414781 SLC25A18Q9H1K4 315 aa13.95□□□□□ -0.18
RAPGEF1-204ENST00000414781 DPEP3Q9H4B8 488 aa13.95□□□□□ -0.18
RAPGEF1-204ENST00000414781 EBF2Q9HAK2 575 aa13.95□□□□□ -0.18
RAPGEF1-204ENST00000414781 LRRC4CQ9HCJ2 640 aa13.95□□□□□ -0.18
RAPGEF1-204ENST00000414781 FBXL12Q9NXK8 326 aa13.95□□□□□ -0.18
RAPGEF1-204ENST00000414781 SUN2Q9UH99 717 aa13.95□□□□□ -0.18
RAPGEF1-204ENST00000414781 FZD4Q9ULV1 537 aa13.95□□□□□ -0.18
RAPGEF1-204ENST00000414781 ARID1BQ8NFD5 2236 aaPredicted RBP13.94□□□□□ -0.18
RAPGEF1-204ENST00000414781 C2CD3Q4AC94 2353 aa13.94□□□□□ -0.18
RAPGEF1-204ENST00000414781 A0A1B0GVM2 712 aa13.94□□□□□ -0.18
RAPGEF1-204ENST00000414781 C10orf142B7Z368 130 aa13.94□□□□□ -0.18
RAPGEF1-204ENST00000414781 RNASEH1O60930 286 aaKnown RBP13.94□□□□□ -0.18
RAPGEF1-204ENST00000414781 STC2O76061 302 aa13.94□□□□□ -0.18
RAPGEF1-204ENST00000414781 NDUFA10O95299 355 aa13.94□□□□□ -0.18
RAPGEF1-204ENST00000414781 MMEP08473 750 aa13.94□□□□□ -0.18
RAPGEF1-204ENST00000414781 PLEKP08567 350 aaPredicted RBP13.94□□□□□ -0.18
RAPGEF1-204ENST00000414781 DEKP35659 375 aaKnown RBP13.94□□□□□ -0.18
RAPGEF1-204ENST00000414781 NUDT1P36639 197 aa13.94□□□□□ -0.18
RAPGEF1-204ENST00000414781 HARS2P49590 506 aaKnown RBP13.94□□□□□ -0.18
RAPGEF1-204ENST00000414781 ASTE1Q2TB18 679 aaPredicted RBP13.94□□□□□ -0.18
RAPGEF1-204ENST00000414781 PPP1R26Q5T8A7 1209 aaPredicted RBP13.94□□□□□ -0.18
RAPGEF1-204ENST00000414781 NAPEPLDQ6IQ20 393 aa13.94□□□□□ -0.18
RAPGEF1-204ENST00000414781 TMEM139Q8IV31 216 aa13.94□□□□□ -0.18
RAPGEF1-204ENST00000414781 SLC30A5Q8TAD4 765 aa13.94□□□□□ -0.18
RAPGEF1-204ENST00000414781 SLC2A14Q8TDB8 520 aa13.94□□□□□ -0.18
RAPGEF1-204ENST00000414781 STK32AQ8WU08 396 aa13.94□□□□□ -0.18
RAPGEF1-204ENST00000414781 SYT11Q9BT88 431 aa13.94□□□□□ -0.18
RAPGEF1-204ENST00000414781 UBXN6Q9BZV1 441 aa13.94□□□□□ -0.18
RAPGEF1-204ENST00000414781 RSPH9Q9H1X1 276 aaPredicted RBP13.94□□□□□ -0.18
RAPGEF1-204ENST00000414781 ACP6Q9NPH0 428 aa13.94□□□□□ -0.18
RAPGEF1-204ENST00000414781 TSPAN16Q9UKR8 245 aa13.94□□□□□ -0.18
RAPGEF1-204ENST00000414781 NME7Q9Y5B8 376 aa13.94□□□□□ -0.18
RAPGEF1-204ENST00000414781 BLACEA4D250 179 aa13.93□□□□□ -0.18
RAPGEF1-204ENST00000414781 SOWAHDA6NJG2 315 aa13.93□□□□□ -0.18
RAPGEF1-204ENST00000414781 DDX3XO00571 662 aaKnown RBP eCLIP13.93□□□□□ -0.18
RAPGEF1-204ENST00000414781 CCP110O43303 1012 aa13.93□□□□□ -0.18
RAPGEF1-204ENST00000414781 RTN2O75298 545 aa13.93□□□□□ -0.18
RAPGEF1-204ENST00000414781 LCA5LO95447 670 aa13.93□□□□□ -0.18
RAPGEF1-204ENST00000414781 FAM200BP0CF97 657 aa13.93□□□□□ -0.18
RAPGEF1-204ENST00000414781 ALPPL2P10696 532 aa13.93□□□□□ -0.18
RAPGEF1-204ENST00000414781 CHRNB2P17787 502 aa13.93□□□□□ -0.18
RAPGEF1-204ENST00000414781 CDH5P33151 784 aaPredicted RBP13.93□□□□□ -0.18
RAPGEF1-204ENST00000414781 NSFP46459 744 aaKnown RBP13.93□□□□□ -0.18
RAPGEF1-204ENST00000414781 PGFP49763 221 aa13.93□□□□□ -0.18
RAPGEF1-204ENST00000414781 COG7P83436 770 aa13.93□□□□□ -0.18
RAPGEF1-204ENST00000414781 CCZ1BP86790 482 aa13.93□□□□□ -0.18
RAPGEF1-204ENST00000414781 CCZ1P86791 482 aaPredicted RBP13.93□□□□□ -0.18
RAPGEF1-204ENST00000414781 FMO1Q01740 532 aa13.93□□□□□ -0.18
RAPGEF1-204ENST00000414781 GOLGA7BQ2TAP0 167 aa13.93□□□□□ -0.18
RAPGEF1-204ENST00000414781 C10orf120Q5SQS8 335 aa13.93□□□□□ -0.18
RAPGEF1-204ENST00000414781 CCDC122Q5T0U0 273 aa13.93□□□□□ -0.18
RAPGEF1-204ENST00000414781 ACAD10Q6JQN1 1059 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms