RNA–Protein interactions for RNA: ENST00000412570.5

SMPD4-203, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-203ENST00000412570 CYP4X1Q8N118 509 aa9.91□□□□□ -0.82
SMPD4-203ENST00000412570 RTL3Q8N8U3 475 aaKnown RBP9.91□□□□□ -0.82
SMPD4-203ENST00000412570 SPATA13Q96N96 652 aa9.91□□□□□ -0.82
SMPD4-203ENST00000412570 ACBD3Q9H3P7 528 aa9.91□□□□□ -0.82
SMPD4-203ENST00000412570 CLIC5Q9NZA1 410 aa9.91□□□□□ -0.82
SMPD4-203ENST00000412570 PAK5Q9P286 719 aa9.91□□□□□ -0.82
SMPD4-203ENST00000412570 RASGRF2O14827 1237 aa9.91□□□□□ -0.82
SMPD4-203ENST00000412570 MUSKO15146 869 aa9.91□□□□□ -0.82
SMPD4-203ENST00000412570 SLC2A3P11169 496 aa9.91□□□□□ -0.82
SMPD4-203ENST00000412570 NEFHP12036 1026 aa9.91□□□□□ -0.82
SMPD4-203ENST00000412570 STIP1P31948 543 aaKnown RBP9.91□□□□□ -0.82
SMPD4-203ENST00000412570 CD68P34810 354 aaPredicted RBP9.91□□□□□ -0.82
SMPD4-203ENST00000412570 BRMS1LQ5PSV4 323 aa9.91□□□□□ -0.82
SMPD4-203ENST00000412570 MROH9Q5TGP6 573 aa9.91□□□□□ -0.82
SMPD4-203ENST00000412570 RNF168Q8IYW5 571 aaPredicted RBP9.91□□□□□ -0.82
SMPD4-203ENST00000412570 C12orf50Q8NA57 414 aaPredicted RBP9.91□□□□□ -0.82
SMPD4-203ENST00000412570 USP13Q92995 863 aaPredicted RBP9.91□□□□□ -0.82
SMPD4-203ENST00000412570 SPATA17Q96L03 361 aa9.91□□□□□ -0.82
SMPD4-203ENST00000412570 LRRC3BQ96PB8 259 aa9.91□□□□□ -0.82
SMPD4-203ENST00000412570 QKIQ96PU8 341 aaKnown RBP eCLIP9.91□□□□□ -0.82
SMPD4-203ENST00000412570 SLC13A1Q9BZW2 595 aa9.91□□□□□ -0.82
SMPD4-203ENST00000412570 FAM124BQ9H5Z6 455 aaPredicted RBP9.91□□□□□ -0.82
SMPD4-203ENST00000412570 ARHGEF38Q9NXL2 777 aa9.91□□□□□ -0.82
SMPD4-203ENST00000412570 SLCO3A1Q9UIG8 710 aa9.91□□□□□ -0.82
SMPD4-203ENST00000412570 IKBKGQ9Y6K9 419 aa9.91□□□□□ -0.82
SMPD4-203ENST00000412570 RPS6KL1Q9Y6S9 549 aa9.91□□□□□ -0.82
SMPD4-203ENST00000412570 DNAJC6O75061 913 aa9.9□□□□□ -0.82
SMPD4-203ENST00000412570 SYF2O95926 243 aaKnown RBP9.9□□□□□ -0.82
SMPD4-203ENST00000412570 FAM163BP0C2L3 166 aa9.9□□□□□ -0.82
SMPD4-203ENST00000412570 ADGRF1Q5T601 910 aa9.9□□□□□ -0.82
SMPD4-203ENST00000412570 HIBCHQ6NVY1 386 aaPredicted RBP9.9□□□□□ -0.82
SMPD4-203ENST00000412570 RHBDF2Q6PJF5 856 aa9.9□□□□□ -0.82
SMPD4-203ENST00000412570 AGGF1Q8N302 714 aaeCLIP9.9□□□□□ -0.82
SMPD4-203ENST00000412570 SPATA6LQ8N4H0 392 aa9.9□□□□□ -0.82
SMPD4-203ENST00000412570 OR6P1Q8NGX9 317 aa9.9□□□□□ -0.82
SMPD4-203ENST00000412570 SLC39A13Q96H72 371 aa9.9□□□□□ -0.82
SMPD4-203ENST00000412570 OLA1Q9NTK5 396 aaKnown RBP9.9□□□□□ -0.82
SMPD4-203ENST00000412570 TDP1Q9NUW8 608 aa9.9□□□□□ -0.82
SMPD4-203ENST00000412570 SAMD15Q9P1V8 674 aa9.9□□□□□ -0.82
SMPD4-203ENST00000412570 UXTQ9UBK9 157 aaPredicted RBP9.9□□□□□ -0.82
SMPD4-203ENST00000412570 LILRB3O75022 631 aa9.9□□□□□ -0.82
SMPD4-203ENST00000412570 HLA-EP13747 358 aa9.9□□□□□ -0.82
SMPD4-203ENST00000412570 ARSAP15289 507 aa9.9□□□□□ -0.82
SMPD4-203ENST00000412570 GNA12Q03113 381 aa9.9□□□□□ -0.82
SMPD4-203ENST00000412570 GRIN2CQ14957 1233 aa9.9□□□□□ -0.82
SMPD4-203ENST00000412570 KBTBD12Q3ZCT8 623 aa9.9□□□□□ -0.82
SMPD4-203ENST00000412570 NTAN1Q96AB6 310 aa9.9□□□□□ -0.82
SMPD4-203ENST00000412570 ZNF576Q9H609 170 aa9.9□□□□□ -0.82
SMPD4-203ENST00000412570 SMYD2Q9NRG4 433 aa9.9□□□□□ -0.82
SMPD4-203ENST00000412570 POLR3BQ9NW08 1133 aaPredicted RBP9.9□□□□□ -0.82
SMPD4-203ENST00000412570 SLC2A6Q9UGQ3 507 aa9.9□□□□□ -0.82
SMPD4-203ENST00000412570 NCOR1O75376 2440 aa9.9□□□□□ -0.82
SMPD4-203ENST00000412570 NOTCH4Q99466 2003 aa9.9□□□□□ -0.82
SMPD4-203ENST00000412570 CXorf49A8MYA2 514 aaPredicted RBP9.9□□□□□ -0.83
SMPD4-203ENST00000412570 MAFKO60675 156 aa9.9□□□□□ -0.83
SMPD4-203ENST00000412570 XYLBO75191 536 aa9.9□□□□□ -0.83
SMPD4-203ENST00000412570 PRSS56P0CW18 603 aa9.9□□□□□ -0.83
SMPD4-203ENST00000412570 MX2P20592 715 aa9.9□□□□□ -0.83
SMPD4-203ENST00000412570 KCNA5P22460 613 aa9.9□□□□□ -0.83
SMPD4-203ENST00000412570 MMP13P45452 471 aa9.9□□□□□ -0.83
SMPD4-203ENST00000412570 SLMAPQ14BN4 828 aa9.9□□□□□ -0.83
SMPD4-203ENST00000412570 ZKSCAN8Q15776 578 aaPredicted RBP9.9□□□□□ -0.83
SMPD4-203ENST00000412570 LILRA6Q6PI73 481 aa9.9□□□□□ -0.83
SMPD4-203ENST00000412570 TRIM62Q9BVG3 475 aa9.9□□□□□ -0.83
SMPD4-203ENST00000412570 UBXN6Q9BZV1 441 aa9.9□□□□□ -0.83
SMPD4-203ENST00000412570 PABPC3Q9H361 631 aaKnown RBP9.9□□□□□ -0.83
SMPD4-203ENST00000412570 EVLQ9UI08 416 aaPredicted RBP9.9□□□□□ -0.83
SMPD4-203ENST00000412570 PLK4O00444 970 aa9.89□□□□□ -0.83
SMPD4-203ENST00000412570 OAS1P00973 400 aaKnown RBP9.89□□□□□ -0.83
SMPD4-203ENST00000412570 ABL2P42684 1182 aa9.89□□□□□ -0.83
SMPD4-203ENST00000412570 PSEN1P49768 467 aa9.89□□□□□ -0.83
SMPD4-203ENST00000412570 EPHB1P54762 984 aa9.89□□□□□ -0.83
SMPD4-203ENST00000412570 SEC13P55735 322 aa9.89□□□□□ -0.83
SMPD4-203ENST00000412570 GABPB1Q06547 395 aaPredicted RBP9.89□□□□□ -0.83
SMPD4-203ENST00000412570 TEX44Q53QW1 395 aa9.89□□□□□ -0.83
SMPD4-203ENST00000412570 HSP90AA5PQ58FG0 334 aa9.89□□□□□ -0.83
SMPD4-203ENST00000412570 LPCAT1Q8NF37 534 aa9.89□□□□□ -0.83
SMPD4-203ENST00000412570 DYDC1Q8WWB3 177 aa9.89□□□□□ -0.83
SMPD4-203ENST00000412570 FGF13Q92913 245 aa9.89□□□□□ -0.83
SMPD4-203ENST00000412570 HAPLN3Q96S86 360 aa9.89□□□□□ -0.83
SMPD4-203ENST00000412570 WDR83Q9BRX9 315 aaKnown RBP9.89□□□□□ -0.83
SMPD4-203ENST00000412570 MLPHQ9BV36 600 aaPredicted RBP9.89□□□□□ -0.83
SMPD4-203ENST00000412570 CINPQ9BW66 212 aaPredicted RBP9.89□□□□□ -0.83
SMPD4-203ENST00000412570 FAM96AQ9H5X1 160 aa9.89□□□□□ -0.83
SMPD4-203ENST00000412570 RRN3Q9NYV6 651 aa9.89□□□□□ -0.83
SMPD4-203ENST00000412570 WHRNQ9P202 907 aa9.89□□□□□ -0.83
SMPD4-203ENST00000412570 DRG1Q9Y295 367 aaKnown RBP9.89□□□□□ -0.83
SMPD4-203ENST00000412570 BPTFQ12830 3046 aa9.89□□□□□ -0.83
SMPD4-203ENST00000412570 A0A1W2PPM1 405 aa9.89□□□□□ -0.83
SMPD4-203ENST00000412570 INSIG1O15503 277 aa9.89□□□□□ -0.83
SMPD4-203ENST00000412570 PIGNO95427 931 aa9.89□□□□□ -0.83
SMPD4-203ENST00000412570 IGLV3-25P01717 112 aa9.89□□□□□ -0.83
SMPD4-203ENST00000412570 SEMA3BQ13214 749 aa9.89□□□□□ -0.83
SMPD4-203ENST00000412570 ARHGAP15Q53QZ3 475 aa9.89□□□□□ -0.83
SMPD4-203ENST00000412570 RABGAP1LQ5R372 815 aa9.89□□□□□ -0.83
SMPD4-203ENST00000412570 PTAR1Q7Z6K3 402 aaPredicted RBP9.89□□□□□ -0.83
SMPD4-203ENST00000412570 PDZD8Q8NEN9 1154 aa9.89□□□□□ -0.83
SMPD4-203ENST00000412570 FLCNQ8NFG4 579 aa9.89□□□□□ -0.83
SMPD4-203ENST00000412570 AGAP2Q99490 1192 aa9.89□□□□□ -0.83
SMPD4-203ENST00000412570 KLF16Q9BXK1 252 aaPredicted RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms