RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 TDRD5Q8NAT2 981 aaKnown RBP4.78□□□□□ -1.64
BRCA1-204ENST00000412061 POGLUT1Q8NBL1 392 aa4.78□□□□□ -1.64
BRCA1-204ENST00000412061 ARHGEF2Q92974 986 aaKnown RBP4.78□□□□□ -1.64
BRCA1-204ENST00000412061 RFKQ969G6 155 aa4.78□□□□□ -1.64
BRCA1-204ENST00000412061 SIPA1Q96FS4 1042 aa4.78□□□□□ -1.64
BRCA1-204ENST00000412061 MASTLQ96GX5 879 aa4.78□□□□□ -1.64
BRCA1-204ENST00000412061 GBP5Q96PP8 586 aa4.78□□□□□ -1.64
BRCA1-204ENST00000412061 GCNAQ96QF7 691 aa4.78□□□□□ -1.64
BRCA1-204ENST00000412061 ABHD1Q96SE0 405 aa4.78□□□□□ -1.64
BRCA1-204ENST00000412061 EIF3CQ99613 913 aaKnown RBP4.78□□□□□ -1.64
BRCA1-204ENST00000412061 ANKRD2Q9GZV1 360 aa4.78□□□□□ -1.64
BRCA1-204ENST00000412061 COQ3Q9NZJ6 369 aa4.78□□□□□ -1.64
BRCA1-204ENST00000412061 CPSF2Q9P2I0 782 aaKnown RBP4.78□□□□□ -1.64
BRCA1-204ENST00000412061 SLCO3A1Q9UIG8 710 aa4.78□□□□□ -1.64
BRCA1-204ENST00000412061 CCNL1Q9UK58 526 aaPredicted RBP4.78□□□□□ -1.64
BRCA1-204ENST00000412061 RAB21Q9UL25 225 aa4.78□□□□□ -1.64
BRCA1-204ENST00000412061 LOC105369274A0A096LPK9 316 aa4.77□□□□□ -1.65
BRCA1-204ENST00000412061 LOC102723532A0A0G2JNH3 316 aa4.77□□□□□ -1.65
BRCA1-204ENST00000412061 FRMD3A2A2Y4 597 aa4.77□□□□□ -1.65
BRCA1-204ENST00000412061 FAM90A7PA6NKC0 464 aa4.77□□□□□ -1.65
BRCA1-204ENST00000412061 FAM90A22PA8MWA6 464 aa4.77□□□□□ -1.65
BRCA1-204ENST00000412061 FAM90A12PA8MX19 464 aa4.77□□□□□ -1.65
BRCA1-204ENST00000412061 FAM90A23PA8MXZ1 464 aa4.77□□□□□ -1.65
BRCA1-204ENST00000412061 INO80B-WBP1J3KQ70 363 aa4.77□□□□□ -1.65
BRCA1-204ENST00000412061 PSMA7O14818 248 aa4.77□□□□□ -1.65
BRCA1-204ENST00000412061 BCAT2O15382 392 aaPredicted RBP4.77□□□□□ -1.65
BRCA1-204ENST00000412061 FMO6PO60774 539 aa4.77□□□□□ -1.65
BRCA1-204ENST00000412061 SEC14L2O76054 403 aa4.77□□□□□ -1.65
BRCA1-204ENST00000412061 NR2F6P10588 404 aa4.77□□□□□ -1.65
BRCA1-204ENST00000412061 PEPDP12955 493 aa4.77□□□□□ -1.65
BRCA1-204ENST00000412061 DESP17661 470 aa4.77□□□□□ -1.65
BRCA1-204ENST00000412061 MCM3P25205 808 aa4.77□□□□□ -1.65
BRCA1-204ENST00000412061 THBS4P35443 961 aa4.77□□□□□ -1.65
BRCA1-204ENST00000412061 AVPR1BP47901 424 aa4.77□□□□□ -1.65
BRCA1-204ENST00000412061 CDH8P55286 799 aa4.77□□□□□ -1.65
BRCA1-204ENST00000412061 FAM3BP58499 235 aaPredicted RBP4.77□□□□□ -1.65
BRCA1-204ENST00000412061 SLMAPQ14BN4 828 aa4.77□□□□□ -1.65
BRCA1-204ENST00000412061 ZNF674Q2M3X9 581 aa4.77□□□□□ -1.65
BRCA1-204ENST00000412061 KRTCAP3Q53RY4 240 aa4.77□□□□□ -1.65
BRCA1-204ENST00000412061 ZNF805Q5CZA5 627 aa4.77□□□□□ -1.65
BRCA1-204ENST00000412061 CASC1Q6TDU7 716 aa4.77□□□□□ -1.65
BRCA1-204ENST00000412061 DPY19L3Q6ZPD9 716 aa4.77□□□□□ -1.65
BRCA1-204ENST00000412061 PIK3AP1Q6ZUJ8 805 aa4.77□□□□□ -1.65
BRCA1-204ENST00000412061 USP51Q70EK9 711 aa4.77□□□□□ -1.65
BRCA1-204ENST00000412061 PLPPR4Q7Z2D5 763 aa4.77□□□□□ -1.65
BRCA1-204ENST00000412061 ZNF551Q7Z340 670 aaPredicted RBP4.77□□□□□ -1.65
BRCA1-204ENST00000412061 KRT27Q7Z3Y8 459 aa4.77□□□□□ -1.65
BRCA1-204ENST00000412061 ZNF804AQ7Z570 1209 aa4.77□□□□□ -1.65
BRCA1-204ENST00000412061 UBE2Q1Q7Z7E8 422 aa4.77□□□□□ -1.65
BRCA1-204ENST00000412061 P3H2Q8IVL5 708 aa4.77□□□□□ -1.65
BRCA1-204ENST00000412061 OR4N4Q8N0Y3 316 aa4.77□□□□□ -1.65
BRCA1-204ENST00000412061 SLC44A3Q8N4M1 653 aa4.77□□□□□ -1.65
BRCA1-204ENST00000412061 SIRT6Q8N6T7 355 aa4.77□□□□□ -1.65
BRCA1-204ENST00000412061 TRIML1Q8N9V2 468 aa4.77□□□□□ -1.65
BRCA1-204ENST00000412061 POC5Q8NA72 575 aa4.77□□□□□ -1.65
BRCA1-204ENST00000412061 SPC24Q8NBT2 197 aa4.77□□□□□ -1.65
BRCA1-204ENST00000412061 OR6J1Q8NGC5 347 aa4.77□□□□□ -1.65
BRCA1-204ENST00000412061 RFWD2Q8NHY2 731 aa4.77□□□□□ -1.65
BRCA1-204ENST00000412061 RP9Q8TA86 221 aaKnown RBP4.77□□□□□ -1.65
BRCA1-204ENST00000412061 SLC2A12Q8TD20 617 aa4.77□□□□□ -1.65
BRCA1-204ENST00000412061 DEPDC1BQ8WUY9 529 aa4.77□□□□□ -1.65
BRCA1-204ENST00000412061 ZFPM2Q8WW38 1151 aa4.77□□□□□ -1.65
BRCA1-204ENST00000412061 OVCA2Q8WZ82 227 aa4.77□□□□□ -1.65
BRCA1-204ENST00000412061 POMGNT1Q8WZA1 660 aa4.77□□□□□ -1.65
BRCA1-204ENST00000412061 TFAP2BQ92481 460 aa4.77□□□□□ -1.65
BRCA1-204ENST00000412061 SECISBP2LQ93073 1101 aaKnown RBP4.77□□□□□ -1.65
BRCA1-204ENST00000412061 ARRDC3Q96B67 414 aa4.77□□□□□ -1.65
BRCA1-204ENST00000412061 SLC22A18Q96BI1 424 aa4.77□□□□□ -1.65
BRCA1-204ENST00000412061 RMDN1Q96DB5 314 aa4.77□□□□□ -1.65
BRCA1-204ENST00000412061 COQ10AQ96MF6 247 aa4.77□□□□□ -1.65
BRCA1-204ENST00000412061 CITED2Q99967 270 aaPredicted RBP4.77□□□□□ -1.65
BRCA1-204ENST00000412061 PAAF1Q9BRP4 392 aa4.77□□□□□ -1.65
BRCA1-204ENST00000412061 THUMPD3Q9BV44 507 aaKnown RBP4.77□□□□□ -1.65
BRCA1-204ENST00000412061 TEX12Q9BXU0 123 aa4.77□□□□□ -1.65
BRCA1-204ENST00000412061 ARHGEF3Q9NR81 526 aa4.77□□□□□ -1.65
BRCA1-204ENST00000412061 HCN3Q9P1Z3 774 aa4.77□□□□□ -1.65
BRCA1-204ENST00000412061 EPS15L1Q9UBC2 864 aa4.77□□□□□ -1.65
BRCA1-204ENST00000412061 GABRQQ9UN88 632 aa4.77□□□□□ -1.65
BRCA1-204ENST00000412061 MAST3O60307 1309 aa4.77□□□□□ -1.65
BRCA1-204ENST00000412061 GOLGA6L10A0A0M3HER8 536 aa4.76□□□□□ -1.65
BRCA1-204ENST00000412061 URADA6NGE7 173 aa4.76□□□□□ -1.65
BRCA1-204ENST00000412061 TEX22C9J3V5 150 aa4.76□□□□□ -1.65
BRCA1-204ENST00000412061 GCOM1H8Y6P7 765 aaPredicted RBP4.76□□□□□ -1.65
BRCA1-204ENST00000412061 CHL1O00533 1208 aa4.76□□□□□ -1.65
BRCA1-204ENST00000412061 CTIFO43310 598 aaKnown RBP4.76□□□□□ -1.65
BRCA1-204ENST00000412061 OR2C1O95371 312 aa4.76□□□□□ -1.65
BRCA1-204ENST00000412061 SLC4A1P02730 911 aa4.76□□□□□ -1.65
BRCA1-204ENST00000412061 C6P13671 934 aa4.76□□□□□ -1.65
BRCA1-204ENST00000412061 SELLP14151 372 aa4.76□□□□□ -1.65
BRCA1-204ENST00000412061 COX7A2P14406 83 aa4.76□□□□□ -1.65
BRCA1-204ENST00000412061 CREB1P16220 341 aa4.76□□□□□ -1.65
BRCA1-204ENST00000412061 MAKP20794 623 aa4.76□□□□□ -1.65
BRCA1-204ENST00000412061 ADRA1DP25100 572 aa4.76□□□□□ -1.65
BRCA1-204ENST00000412061 CIITAP33076 1130 aa4.76□□□□□ -1.65
BRCA1-204ENST00000412061 GP5P40197 560 aa4.76□□□□□ -1.65
BRCA1-204ENST00000412061 ALDH3A2P51648 485 aa4.76□□□□□ -1.65
BRCA1-204ENST00000412061 SLC12A2P55011 1212 aa4.76□□□□□ -1.65
BRCA1-204ENST00000412061 EIF3BP55884 814 aaKnown RBP4.76□□□□□ -1.65
BRCA1-204ENST00000412061 RRP1P56182 461 aaKnown RBP4.76□□□□□ -1.65
BRCA1-204ENST00000412061 HSD17B7P56937 341 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms