RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.17□□□□□ -1.58
LSM5-205ENST00000409952 COPG1Q9Y678 874 aaKnown RBP5.17□□□□□ -1.58
LSM5-205ENST00000409952 SPATA31A3Q5VYP0 1347 aa5.17□□□□□ -1.58
LSM5-205ENST00000409952 CYP3A7-CYP3A51PA0A087WV96 503 aa5.16□□□□□ -1.58
LSM5-205ENST00000409952 C3orf70A6NLC5 250 aaPredicted RBP5.16□□□□□ -1.58
LSM5-205ENST00000409952 EIF3CLB5ME19 914 aaKnown RBP5.16□□□□□ -1.58
LSM5-205ENST00000409952 STX6O43752 255 aa5.16□□□□□ -1.58
LSM5-205ENST00000409952 EXOC3O60645 756 aa5.16□□□□□ -1.58
LSM5-205ENST00000409952 SUN1O94901 812 aa5.16□□□□□ -1.58
LSM5-205ENST00000409952 KCNA2P16389 499 aa5.16□□□□□ -1.58
LSM5-205ENST00000409952 CYP3A7P24462 503 aa5.16□□□□□ -1.58
LSM5-205ENST00000409952 AVPR2P30518 371 aa5.16□□□□□ -1.58
LSM5-205ENST00000409952 MCM7P33993 719 aa5.16□□□□□ -1.58
LSM5-205ENST00000409952 BMPR1AP36894 532 aa5.16□□□□□ -1.58
LSM5-205ENST00000409952 MTNR1AP48039 350 aa5.16□□□□□ -1.58
LSM5-205ENST00000409952 NDUFV1P49821 464 aa5.16□□□□□ -1.58
LSM5-205ENST00000409952 ANXA11P50995 505 aaKnown RBP5.16□□□□□ -1.58
LSM5-205ENST00000409952 SLC12A2P55011 1212 aa5.16□□□□□ -1.58
LSM5-205ENST00000409952 MFAP4P55083 255 aa5.16□□□□□ -1.58
LSM5-205ENST00000409952 EVCP57679 992 aa5.16□□□□□ -1.58
LSM5-205ENST00000409952 MRPS35P82673 323 aaKnown RBP5.16□□□□□ -1.58
LSM5-205ENST00000409952 MC2RQ01718 297 aa5.16□□□□□ -1.58
LSM5-205ENST00000409952 CEBPZQ03701 1054 aaKnown RBP5.16□□□□□ -1.58
LSM5-205ENST00000409952 CSTF3Q12996 717 aaKnown RBP5.16□□□□□ -1.58
LSM5-205ENST00000409952 COASYQ13057 564 aa5.16□□□□□ -1.58
LSM5-205ENST00000409952 RIN1Q13671 783 aa5.16□□□□□ -1.58
LSM5-205ENST00000409952 NFE2L1Q14494 772 aa5.16□□□□□ -1.58
LSM5-205ENST00000409952 ZNF568Q3ZCX4 644 aa5.16□□□□□ -1.58
LSM5-205ENST00000409952 CRY2Q49AN0 593 aa5.16□□□□□ -1.58
LSM5-205ENST00000409952 SETMARQ53H47 684 aaPredicted RBP5.16□□□□□ -1.58
LSM5-205ENST00000409952 SH2D4BQ5SQS7 431 aa5.16□□□□□ -1.58
LSM5-205ENST00000409952 MEX3CQ5U5Q3 659 aaKnown RBP5.16□□□□□ -1.58
LSM5-205ENST00000409952 RAB12Q6IQ22 244 aa5.16□□□□□ -1.58
LSM5-205ENST00000409952 WDR93Q6P2C0 686 aa5.16□□□□□ -1.58
LSM5-205ENST00000409952 Q6ZSN1 163 aa5.16□□□□□ -1.58
LSM5-205ENST00000409952 NUP54Q7Z3B4 507 aa5.16□□□□□ -1.58
LSM5-205ENST00000409952 TMPRSS9Q7Z410 1059 aa5.16□□□□□ -1.58
LSM5-205ENST00000409952 IZUMO1Q8IYV9 350 aa5.16□□□□□ -1.58
LSM5-205ENST00000409952 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.16□□□□□ -1.58
LSM5-205ENST00000409952 SUPT20HQ8NEM7 779 aa5.16□□□□□ -1.58
LSM5-205ENST00000409952 SETD6Q8TBK2 473 aa5.16□□□□□ -1.58
LSM5-205ENST00000409952 ZNF483Q8TF39 744 aaPredicted RBP5.16□□□□□ -1.58
LSM5-205ENST00000409952 TRMT61AQ96FX7 289 aaKnown RBP5.16□□□□□ -1.58
LSM5-205ENST00000409952 ZNF512Q96ME7 567 aaPredicted RBP5.16□□□□□ -1.58
LSM5-205ENST00000409952 FUT8Q9BYC5 575 aa5.16□□□□□ -1.58
LSM5-205ENST00000409952 KLC2Q9H0B6 622 aa5.16□□□□□ -1.58
LSM5-205ENST00000409952 TSPY26PQ9H489 355 aa5.16□□□□□ -1.58
LSM5-205ENST00000409952 SLC22A11Q9NSA0 550 aa5.16□□□□□ -1.58
LSM5-205ENST00000409952 RRP7BPQ9NSQ0 103 aa5.16□□□□□ -1.58
LSM5-205ENST00000409952 PEMTQ9UBM1 199 aa5.16□□□□□ -1.58
LSM5-205ENST00000409952 DNAJB9Q9UBS3 223 aa5.16□□□□□ -1.58
LSM5-205ENST00000409952 HSPB7Q9UBY9 170 aa5.16□□□□□ -1.58
LSM5-205ENST00000409952 KLQ9UEF7 1012 aa5.16□□□□□ -1.58
LSM5-205ENST00000409952 ANAPC2Q9UJX6 822 aa5.16□□□□□ -1.58
LSM5-205ENST00000409952 ZFR2Q9UPR6 939 aaKnown RBP5.16□□□□□ -1.58
LSM5-205ENST00000409952 POMT1Q9Y6A1 747 aa5.16□□□□□ -1.58
LSM5-205ENST00000409952 AOX1Q06278 1338 aa5.16□□□□□ -1.58
LSM5-205ENST00000409952 A0A1W2PRX2 142 aa5.15□□□□□ -1.59
LSM5-205ENST00000409952 TRBC2A0A5B9 178 aa5.15□□□□□ -1.59
LSM5-205ENST00000409952 OR2A25A4D2G3 310 aa5.15□□□□□ -1.59
LSM5-205ENST00000409952 CCDC69A6NI79 296 aa5.15□□□□□ -1.59
LSM5-205ENST00000409952 NPIPB13A6NJU9 1138 aa5.15□□□□□ -1.59
LSM5-205ENST00000409952 TTC36A6NLP5 189 aa5.15□□□□□ -1.59
LSM5-205ENST00000409952 NPIPB5A8MRT5 1133 aa5.15□□□□□ -1.59
LSM5-205ENST00000409952 A8MVJ9 347 aa5.15□□□□□ -1.59
LSM5-205ENST00000409952 NPIPB4C9JG80 1138 aa5.15□□□□□ -1.59
LSM5-205ENST00000409952 PSMD14O00487 310 aa5.15□□□□□ -1.59
LSM5-205ENST00000409952 ZNF213O14771 459 aa5.15□□□□□ -1.59
LSM5-205ENST00000409952 C22orf31O95567 290 aa5.15□□□□□ -1.59
LSM5-205ENST00000409952 FTCDO95954 541 aa5.15□□□□□ -1.59
LSM5-205ENST00000409952 SLC4A1P02730 911 aa5.15□□□□□ -1.59
LSM5-205ENST00000409952 ALDOAP04075 364 aaKnown RBP5.15□□□□□ -1.59
LSM5-205ENST00000409952 CHRM4P08173 479 aa5.15□□□□□ -1.59
LSM5-205ENST00000409952 SNRNP70P08621 437 aaKnown RBP5.15□□□□□ -1.59
LSM5-205ENST00000409952 FDPSP14324 419 aaKnown RBP5.15□□□□□ -1.59
LSM5-205ENST00000409952 HOXC8P31273 242 aa5.15□□□□□ -1.59
LSM5-205ENST00000409952 SELENOPP49908 381 aa5.15□□□□□ -1.59
LSM5-205ENST00000409952 RPS6KA3P51812 740 aa5.15□□□□□ -1.59
LSM5-205ENST00000409952 MRPS5P82675 430 aaKnown RBP5.15□□□□□ -1.59
LSM5-205ENST00000409952 ALKBH1Q13686 389 aaKnown RBP5.15□□□□□ -1.59
LSM5-205ENST00000409952 ALCAMQ13740 583 aa5.15□□□□□ -1.59
LSM5-205ENST00000409952 SNTB1Q13884 538 aaKnown RBP5.15□□□□□ -1.59
LSM5-205ENST00000409952 BYSLQ13895 437 aaKnown RBP5.15□□□□□ -1.59
LSM5-205ENST00000409952 FRG1Q14331 258 aaKnown RBP5.15□□□□□ -1.59
LSM5-205ENST00000409952 MORF4L2Q15014 288 aa5.15□□□□□ -1.59
LSM5-205ENST00000409952 PPA1Q15181 289 aa5.15□□□□□ -1.59
LSM5-205ENST00000409952 FAM187BQ17R55 369 aa5.15□□□□□ -1.59
LSM5-205ENST00000409952 C15orf59Q2T9L4 293 aaPredicted RBP5.15□□□□□ -1.59
LSM5-205ENST00000409952 DCAF17Q5H9S7 520 aaPredicted RBP5.15□□□□□ -1.59
LSM5-205ENST00000409952 RBM20Q5T481 1227 aaKnown RBP5.15□□□□□ -1.59
LSM5-205ENST00000409952 FAM171A1Q5VUB5 890 aa5.15□□□□□ -1.59
LSM5-205ENST00000409952 SLC9A4Q6AI14 798 aa5.15□□□□□ -1.59
LSM5-205ENST00000409952 GRHL2Q6ISB3 625 aa5.15□□□□□ -1.59
LSM5-205ENST00000409952 ACSM6Q6P461 480 aa5.15□□□□□ -1.59
LSM5-205ENST00000409952 FAM111BQ6SJ93 734 aa5.15□□□□□ -1.59
LSM5-205ENST00000409952 CASC1Q6TDU7 716 aa5.15□□□□□ -1.59
LSM5-205ENST00000409952 SLC9B2Q86UD5 537 aa5.15□□□□□ -1.59
LSM5-205ENST00000409952 KBTBD6Q86V97 674 aa5.15□□□□□ -1.59
LSM5-205ENST00000409952 RHPN2Q8IUC4 686 aa5.15□□□□□ -1.59
LSM5-205ENST00000409952 P3H2Q8IVL5 708 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms