RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 LRMPQ12912 555 aa7.97□□□□□ -1.13
LSM5-202ENST00000409292 KCNJ12Q14500 433 aa7.97□□□□□ -1.13
LSM5-202ENST00000409292 SHBQ15464 509 aa7.97□□□□□ -1.13
LSM5-202ENST00000409292 DCAF6Q58WW2 860 aa7.97□□□□□ -1.13
LSM5-202ENST00000409292 ARHGAP40Q5TG30 622 aa7.97□□□□□ -1.13
LSM5-202ENST00000409292 BEND5Q7L4P6 421 aa7.97□□□□□ -1.13
LSM5-202ENST00000409292 TMC6Q7Z403 805 aa7.97□□□□□ -1.13
LSM5-202ENST00000409292 ZSCAN30Q86W11 494 aa7.97□□□□□ -1.13
LSM5-202ENST00000409292 AADATQ8N5Z0 425 aa7.97□□□□□ -1.13
LSM5-202ENST00000409292 OR4C6Q8NH72 309 aa7.97□□□□□ -1.13
LSM5-202ENST00000409292 WFDC5Q8TCV5 224 aa7.97□□□□□ -1.13
LSM5-202ENST00000409292 MAPK15Q8TD08 544 aa7.97□□□□□ -1.13
LSM5-202ENST00000409292 SEMA4DQ92854 862 aa7.97□□□□□ -1.13
LSM5-202ENST00000409292 PTPRN2Q92932 1015 aa7.97□□□□□ -1.13
LSM5-202ENST00000409292 IFT43Q96FT9 208 aa7.97□□□□□ -1.13
LSM5-202ENST00000409292 PPP1R16AQ96I34 528 aa7.97□□□□□ -1.13
LSM5-202ENST00000409292 RPL10LQ96L21 214 aaKnown RBP7.97□□□□□ -1.13
LSM5-202ENST00000409292 MRGPRX3Q96LB0 322 aa7.97□□□□□ -1.13
LSM5-202ENST00000409292 FAM129BQ96TA1 746 aa7.97□□□□□ -1.13
LSM5-202ENST00000409292 CALN1Q9BXU9 219 aa7.97□□□□□ -1.13
LSM5-202ENST00000409292 CLMPQ9H6B4 373 aa7.97□□□□□ -1.13
LSM5-202ENST00000409292 POLR1BQ9H9Y6 1135 aa7.97□□□□□ -1.13
LSM5-202ENST00000409292 SLCO3A1Q9UIG8 710 aa7.97□□□□□ -1.13
LSM5-202ENST00000409292 ASPMQ8IZT6 3477 aa7.97□□□□□ -1.13
LSM5-202ENST00000409292 SPEGQ15772 3267 aa7.96□□□□□ -1.13
LSM5-202ENST00000409292 HELZ2Q9BYK8 2649 aaKnown RBP7.96□□□□□ -1.14
LSM5-202ENST00000409292 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.96□□□□□ -1.14
LSM5-202ENST00000409292 GOLGA6L4A6NEF3 574 aa7.96□□□□□ -1.14
LSM5-202ENST00000409292 B8ZZF3 427 aa7.96□□□□□ -1.14
LSM5-202ENST00000409292 PIK3R2O00459 728 aa7.96□□□□□ -1.14
LSM5-202ENST00000409292 KPNA3O00505 521 aaPredicted RBP7.96□□□□□ -1.14
LSM5-202ENST00000409292 SLC31A1O15431 190 aa7.96□□□□□ -1.14
LSM5-202ENST00000409292 FFAR2O15552 330 aa7.96□□□□□ -1.14
LSM5-202ENST00000409292 PLRG1O43660 514 aaKnown RBP7.96□□□□□ -1.14
LSM5-202ENST00000409292 BNIP3LO60238 219 aa7.96□□□□□ -1.14
LSM5-202ENST00000409292 OPA1O60313 960 aa7.96□□□□□ -1.14
LSM5-202ENST00000409292 CSO75390 466 aaKnown RBP7.96□□□□□ -1.14
LSM5-202ENST00000409292 C1QL1O75973 258 aa7.96□□□□□ -1.14
LSM5-202ENST00000409292 PCDH8O95206 1070 aa7.96□□□□□ -1.14
LSM5-202ENST00000409292 SMC2O95347 1197 aa7.96□□□□□ -1.14
LSM5-202ENST00000409292 PRNPP04156 253 aa7.96□□□□□ -1.14
LSM5-202ENST00000409292 MPOP05164 745 aa7.96□□□□□ -1.14
LSM5-202ENST00000409292 CKMT1AP12532 417 aa7.96□□□□□ -1.14
LSM5-202ENST00000409292 C6P13671 934 aa7.96□□□□□ -1.14
LSM5-202ENST00000409292 PDGFRAP16234 1089 aa7.96□□□□□ -1.14
LSM5-202ENST00000409292 HNRNPA2B1P22626 353 aaKnown RBP7.96□□□□□ -1.14
LSM5-202ENST00000409292 DGKAP23743 735 aa7.96□□□□□ -1.14
LSM5-202ENST00000409292 CCR1P32246 355 aa7.96□□□□□ -1.14
LSM5-202ENST00000409292 PPP1R2P41236 205 aa7.96□□□□□ -1.14
LSM5-202ENST00000409292 SGSHP51688 502 aa7.96□□□□□ -1.14
LSM5-202ENST00000409292 CLDN6P56747 220 aa7.96□□□□□ -1.14
LSM5-202ENST00000409292 DNM1Q05193 864 aaKnown RBP7.96□□□□□ -1.14
LSM5-202ENST00000409292 LRRC63Q05C16 580 aa7.96□□□□□ -1.14
LSM5-202ENST00000409292 KCNMA1Q12791 1236 aa7.96□□□□□ -1.14
LSM5-202ENST00000409292 ZNF177Q13360 481 aaPredicted RBP7.96□□□□□ -1.14
LSM5-202ENST00000409292 RAP1GAP2Q684P5 730 aa7.96□□□□□ -1.14
LSM5-202ENST00000409292 PMF1Q6P1K2 205 aa7.96□□□□□ -1.14
LSM5-202ENST00000409292 BHLHA9Q7RTU4 235 aa7.96□□□□□ -1.14
LSM5-202ENST00000409292 ERICH1Q86X53 443 aa7.96□□□□□ -1.14
LSM5-202ENST00000409292 ZC3H3Q8IXZ2 948 aaKnown RBP7.96□□□□□ -1.14
LSM5-202ENST00000409292 PPM1KQ8N3J5 372 aa7.96□□□□□ -1.14
LSM5-202ENST00000409292 ARL14Q8N4G2 192 aa7.96□□□□□ -1.14
LSM5-202ENST00000409292 WDR48Q8TAF3 677 aa7.96□□□□□ -1.14
LSM5-202ENST00000409292 DQX1Q8TE96 717 aaKnown RBP7.96□□□□□ -1.14
LSM5-202ENST00000409292 SLC35F5Q8WV83 523 aa7.96□□□□□ -1.14
LSM5-202ENST00000409292 EEF2KMTQ96G04 330 aa7.96□□□□□ -1.14
LSM5-202ENST00000409292 MYO19Q96H55 970 aa7.96□□□□□ -1.14
LSM5-202ENST00000409292 FCRL2Q96LA5 508 aaPredicted RBP7.96□□□□□ -1.14
LSM5-202ENST00000409292 PRICKLE1Q96MT3 831 aaPredicted RBP7.96□□□□□ -1.14
LSM5-202ENST00000409292 RPRD1AQ96P16 312 aaPredicted RBP7.96□□□□□ -1.14
LSM5-202ENST00000409292 C2orf49Q9BVC5 232 aaPredicted RBP7.96□□□□□ -1.14
LSM5-202ENST00000409292 NUCKS1Q9H1E3 243 aaKnown RBP7.96□□□□□ -1.14
LSM5-202ENST00000409292 FAM204AQ9H8W3 233 aa7.96□□□□□ -1.14
LSM5-202ENST00000409292 EBF2Q9HAK2 575 aa7.96□□□□□ -1.14
LSM5-202ENST00000409292 POPDC2Q9HBU9 364 aa7.96□□□□□ -1.14
LSM5-202ENST00000409292 TMEM51Q9NW97 253 aa7.96□□□□□ -1.14
LSM5-202ENST00000409292 NLGN3Q9NZ94 848 aa7.96□□□□□ -1.14
LSM5-202ENST00000409292 VPS28Q9UK41 221 aa7.96□□□□□ -1.14
LSM5-202ENST00000409292 INTS6Q9UL03 887 aaKnown RBP7.96□□□□□ -1.14
LSM5-202ENST00000409292 COQ4Q9Y3A0 265 aa7.96□□□□□ -1.14
LSM5-202ENST00000409292 PAXBP1Q9Y5B6 917 aa7.96□□□□□ -1.14
LSM5-202ENST00000409292 GCN1Q92616 2671 aaKnown RBP7.95□□□□□ -1.14
LSM5-202ENST00000409292 A0A1W2PQU0 124 aa7.95□□□□□ -1.14
LSM5-202ENST00000409292 A6NNZ2 444 aa7.95□□□□□ -1.14
LSM5-202ENST00000409292 KCNU1A8MYU2 1149 aa7.95□□□□□ -1.14
LSM5-202ENST00000409292 PSMA7O14818 248 aa7.95□□□□□ -1.14
LSM5-202ENST00000409292 MCF2LO15068 1137 aa7.95□□□□□ -1.14
LSM5-202ENST00000409292 SLC28A2O43868 658 aa7.95□□□□□ -1.14
LSM5-202ENST00000409292 RTN2O75298 545 aa7.95□□□□□ -1.14
LSM5-202ENST00000409292 CTSOP43234 321 aaPredicted RBP7.95□□□□□ -1.14
LSM5-202ENST00000409292 PLK1P53350 603 aa7.95□□□□□ -1.14
LSM5-202ENST00000409292 INHBCP55103 352 aa7.95□□□□□ -1.14
LSM5-202ENST00000409292 PPP2CBP62714 309 aa7.95□□□□□ -1.14
LSM5-202ENST00000409292 YWHAZP63104 245 aaKnown RBP7.95□□□□□ -1.14
LSM5-202ENST00000409292 PPP2CAP67775 309 aa7.95□□□□□ -1.14
LSM5-202ENST00000409292 CNTN1Q12860 1018 aa7.95□□□□□ -1.14
LSM5-202ENST00000409292 DPYDQ12882 1025 aa7.95□□□□□ -1.14
LSM5-202ENST00000409292 DLG2Q15700 870 aa7.95□□□□□ -1.14
LSM5-202ENST00000409292 POM121L1PQ3SYA9 428 aa7.95□□□□□ -1.14
LSM5-202ENST00000409292 CCDC40Q4G0X9 1142 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms