RNA–Protein interactions for RNA: ENST00000409248.8

C4orf48-201, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C4orf48, Length 433 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-201ENST00000409248 DCLK1O15075 740 aa21.26■□□□□ 0.99
C4orf48-201ENST00000409248 MAP3K13O43283 966 aa21.26■□□□□ 0.99
C4orf48-201ENST00000409248 RETP07949 1114 aa21.26■□□□□ 0.99
C4orf48-201ENST00000409248 ACADMP11310 421 aa21.26■□□□□ 0.99
C4orf48-201ENST00000409248 EPHB2P29323 1055 aa21.26■□□□□ 0.99
C4orf48-201ENST00000409248 STK19P49842 368 aaPredicted RBP21.26■□□□□ 0.99
C4orf48-201ENST00000409248 COPAP53621 1224 aa21.26■□□□□ 0.99
C4orf48-201ENST00000409248 ATP13A4Q4VNC1 1196 aa21.26■□□□□ 0.99
C4orf48-201ENST00000409248 PMS2CLQ68D20 193 aa21.26■□□□□ 0.99
C4orf48-201ENST00000409248 NLRP14Q86W24 1093 aa21.26■□□□□ 0.99
C4orf48-201ENST00000409248 UBL4BQ8N7F7 174 aa21.26■□□□□ 0.99
C4orf48-201ENST00000409248 RPL10LQ96L21 214 aaKnown RBP21.26■□□□□ 0.99
C4orf48-201ENST00000409248 SLC6A17Q9H1V8 727 aa21.26■□□□□ 0.99
C4orf48-201ENST00000409248 CATSPERBQ9H7T0 1116 aa21.26■□□□□ 0.99
C4orf48-201ENST00000409248 PRSS16Q9NQE7 514 aa21.26■□□□□ 0.99
C4orf48-201ENST00000409248 DONSONQ9NYP3 566 aa21.26■□□□□ 0.99
C4orf48-201ENST00000409248 RCOR3Q9P2K3 495 aaPredicted RBP21.26■□□□□ 0.99
C4orf48-201ENST00000409248 NEU3Q9UQ49 428 aa21.26■□□□□ 0.99
C4orf48-201ENST00000409248 LRRD1A4D1F6 860 aa21.25■□□□□ 0.99
C4orf48-201ENST00000409248 FGF10O15520 208 aaPredicted RBP21.25■□□□□ 0.99
C4orf48-201ENST00000409248 DAPK3O43293 454 aa21.25■□□□□ 0.99
C4orf48-201ENST00000409248 RNASEH1O60930 286 aaKnown RBP21.25■□□□□ 0.99
C4orf48-201ENST00000409248 BCKDHBP21953 392 aa21.25■□□□□ 0.99
C4orf48-201ENST00000409248 NUMBP49757 651 aa21.25■□□□□ 0.99
C4orf48-201ENST00000409248 GNA12Q03113 381 aa21.25■□□□□ 0.99
C4orf48-201ENST00000409248 ZBTB16Q05516 673 aa21.25■□□□□ 0.99
C4orf48-201ENST00000409248 ZNF776Q68DI1 518 aaPredicted RBP21.25■□□□□ 0.99
C4orf48-201ENST00000409248 RFX8Q6ZV50 586 aa21.25■□□□□ 0.99
C4orf48-201ENST00000409248 LPCAT2Q7L5N7 544 aa21.25■□□□□ 0.99
C4orf48-201ENST00000409248 CACUL1Q86Y37 369 aa21.25■□□□□ 0.99
C4orf48-201ENST00000409248 KATNAL2Q8IYT4 538 aa21.25■□□□□ 0.99
C4orf48-201ENST00000409248 FAM71BQ8TC56 605 aa21.25■□□□□ 0.99
C4orf48-201ENST00000409248 KRT35Q92764 455 aa21.25■□□□□ 0.99
C4orf48-201ENST00000409248 PSMB7Q99436 277 aa21.25■□□□□ 0.99
C4orf48-201ENST00000409248 CALN1Q9BXU9 219 aa21.25■□□□□ 0.99
C4orf48-201ENST00000409248 DUSP15Q9H1R2 295 aaPredicted RBP21.25■□□□□ 0.99
C4orf48-201ENST00000409248 ATP13A1Q9HD20 1204 aa21.25■□□□□ 0.99
C4orf48-201ENST00000409248 USP36Q9P275 1121 aaKnown RBP21.25■□□□□ 0.99
C4orf48-201ENST00000409248 VPS51Q9UID3 782 aa21.25■□□□□ 0.99
C4orf48-201ENST00000409248 SLCO3A1Q9UIG8 710 aa21.25■□□□□ 0.99
C4orf48-201ENST00000409248 CYP8B1Q9UNU6 501 aa21.25■□□□□ 0.99
C4orf48-201ENST00000409248 ZKSCAN5Q9Y2L8 839 aa21.25■□□□□ 0.99
C4orf48-201ENST00000409248 PCDHA3Q9Y5H8 950 aa21.25■□□□□ 0.99
C4orf48-201ENST00000409248 FAM186AA6NE01 2351 aa21.25■□□□□ 0.99
C4orf48-201ENST00000409248 MYO15AQ9UKN7 3530 aa21.25■□□□□ 0.99
C4orf48-201ENST00000409248 GPR179Q6PRD1 2367 aa21.24■□□□□ 0.99
C4orf48-201ENST00000409248 TTC34A8MYJ7 566 aa21.24■□□□□ 0.99
C4orf48-201ENST00000409248 LRP3O75074 770 aa21.24■□□□□ 0.99
C4orf48-201ENST00000409248 SIN3BO75182 1162 aa21.24■□□□□ 0.99
C4orf48-201ENST00000409248 EPN2O95208 641 aa21.24■□□□□ 0.99
C4orf48-201ENST00000409248 GOT1P17174 413 aa21.24■□□□□ 0.99
C4orf48-201ENST00000409248 HCAR3P49019 387 aa21.24■□□□□ 0.99
C4orf48-201ENST00000409248 ARSEP51690 589 aa21.24■□□□□ 0.99
C4orf48-201ENST00000409248 TTC31Q49AM3 519 aaPredicted RBP21.24■□□□□ 0.99
C4orf48-201ENST00000409248 ZNF569Q5MCW4 686 aa21.24■□□□□ 0.99
C4orf48-201ENST00000409248 RETSATQ6NUM9 610 aa21.24■□□□□ 0.99
C4orf48-201ENST00000409248 GPR161Q8N6U8 529 aaKnown RBP21.24■□□□□ 0.99
C4orf48-201ENST00000409248 RTL3Q8N8U3 475 aaKnown RBP21.24■□□□□ 0.99
C4orf48-201ENST00000409248 OR7D4Q8NG98 312 aa21.24■□□□□ 0.99
C4orf48-201ENST00000409248 RAPGEF5Q92565 580 aa21.24■□□□□ 0.99
C4orf48-201ENST00000409248 ZNF670Q9BS34 389 aa21.24■□□□□ 0.99
C4orf48-201ENST00000409248 CWC15Q9P013 229 aaKnown RBP21.24■□□□□ 0.99
C4orf48-201ENST00000409248 HS3ST2Q9Y278 367 aa21.24■□□□□ 0.99
C4orf48-201ENST00000409248 PCDHGA5Q9Y5G8 931 aa21.24■□□□□ 0.99
C4orf48-201ENST00000409248 THADAQ6YHU6 1953 aa21.24■□□□□ 0.99
C4orf48-201ENST00000409248 CHD5Q8TDI0 1954 aa21.23■□□□□ 0.99
C4orf48-201ENST00000409248 IGHV1OR15-9A0A0B4J2B8 117 aa21.23■□□□□ 0.99
C4orf48-201ENST00000409248 A0A0D9SEW6 157 aa21.23■□□□□ 0.99
C4orf48-201ENST00000409248 ATP9BO43861 1147 aa21.23■□□□□ 0.99
C4orf48-201ENST00000409248 RAMP2O60895 175 aa21.23■□□□□ 0.99
C4orf48-201ENST00000409248 DNTTP04053 509 aa21.23■□□□□ 0.99
C4orf48-201ENST00000409248 C7P10643 843 aa21.23■□□□□ 0.99
C4orf48-201ENST00000409248 KDELR1P24390 212 aa21.23■□□□□ 0.99
C4orf48-201ENST00000409248 MARCKSL1P49006 195 aa21.23■□□□□ 0.99
C4orf48-201ENST00000409248 CLCN6P51797 869 aa21.23■□□□□ 0.99
C4orf48-201ENST00000409248 RWDD2BP57060 319 aa21.23■□□□□ 0.99
C4orf48-201ENST00000409248 DPYSL3Q14195 570 aa21.23■□□□□ 0.99
C4orf48-201ENST00000409248 ELAVL3Q14576 367 aaKnown RBP21.23■□□□□ 0.99
C4orf48-201ENST00000409248 SPDYCQ5MJ68 293 aa21.23■□□□□ 0.99
C4orf48-201ENST00000409248 VSIG1Q86XK7 387 aa21.23■□□□□ 0.99
C4orf48-201ENST00000409248 SH2D3CQ8N5H7 860 aa21.23■□□□□ 0.99
C4orf48-201ENST00000409248 HES6Q96HZ4 224 aa21.23■□□□□ 0.99
C4orf48-201ENST00000409248 RBM41Q96IZ5 413 aaKnown RBP21.23■□□□□ 0.99
C4orf48-201ENST00000409248 CSPG4P5Q96PW8 444 aa21.23■□□□□ 0.99
C4orf48-201ENST00000409248 SPON2Q9BUD6 331 aa21.23■□□□□ 0.99
C4orf48-201ENST00000409248 RSPH9Q9H1X1 276 aaPredicted RBP21.23■□□□□ 0.99
C4orf48-201ENST00000409248 MAGEH1Q9H213 219 aa21.23■□□□□ 0.99
C4orf48-201ENST00000409248 DNAI1Q9UI46 699 aa21.23■□□□□ 0.99
C4orf48-201ENST00000409248 MBD1Q9UIS9 605 aaPredicted RBP21.23■□□□□ 0.99
C4orf48-201ENST00000409248 PACSIN2Q9UNF0 486 aaPredicted RBP21.23■□□□□ 0.99
C4orf48-201ENST00000409248 RIF1Q5UIP0 2472 aaKnown RBP21.23■□□□□ 0.99
C4orf48-201ENST00000409248 CBX4O00257 560 aa21.22■□□□□ 0.99
C4orf48-201ENST00000409248 SNAP91O60641 907 aa21.22■□□□□ 0.99
C4orf48-201ENST00000409248 ZRANB2O95218 330 aaKnown RBP eCLIP21.22■□□□□ 0.99
C4orf48-201ENST00000409248 CD48P09326 243 aa21.22■□□□□ 0.99
C4orf48-201ENST00000409248 CD6P30203 668 aa21.22■□□□□ 0.99
C4orf48-201ENST00000409248 OXTRP30559 389 aa21.22■□□□□ 0.99
C4orf48-201ENST00000409248 TPMTP51580 245 aa21.22■□□□□ 0.99
C4orf48-201ENST00000409248 GEMIN4P57678 1058 aaKnown RBP21.22■□□□□ 0.99
C4orf48-201ENST00000409248 RPL6Q02878 288 aaKnown RBP21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms