RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 COX4I1P13073 169 aa10.03□□□□□ -0.8
MSH2-202ENST00000406134 TTLL12Q14166 644 aaPredicted RBP10.03□□□□□ -0.8
MSH2-202ENST00000406134 TCHHL1Q5QJ38 904 aaPredicted RBP10.03□□□□□ -0.8
MSH2-202ENST00000406134 KCNMB4Q86W47 210 aa10.03□□□□□ -0.8
MSH2-202ENST00000406134 NME8Q8N427 588 aa10.03□□□□□ -0.8
MSH2-202ENST00000406134 VPS39Q96JC1 886 aa10.03□□□□□ -0.8
MSH2-202ENST00000406134 TNIP3Q96KP6 325 aa10.03□□□□□ -0.8
MSH2-202ENST00000406134 TEKT5Q96M29 485 aa10.03□□□□□ -0.8
MSH2-202ENST00000406134 TTC1Q99614 292 aa10.03□□□□□ -0.8
MSH2-202ENST00000406134 KIFC1Q9BW19 673 aa10.03□□□□□ -0.8
MSH2-202ENST00000406134 WDR55Q9H6Y2 383 aaPredicted RBP10.03□□□□□ -0.8
MSH2-202ENST00000406134 TMLHEQ9NVH6 421 aa10.03□□□□□ -0.8
MSH2-202ENST00000406134 UBP1Q9NZI7 540 aa10.03□□□□□ -0.8
MSH2-202ENST00000406134 ZDHHC2Q9UIJ5 367 aa10.03□□□□□ -0.8
MSH2-202ENST00000406134 TMEM114B3SHH9 223 aa10.02□□□□□ -0.8
MSH2-202ENST00000406134 CAPNS1P04632 268 aa10.02□□□□□ -0.8
MSH2-202ENST00000406134 UBTFL6P0CB48 400 aaPredicted RBP10.02□□□□□ -0.8
MSH2-202ENST00000406134 MYL4P12829 197 aa10.02□□□□□ -0.8
MSH2-202ENST00000406134 PRDX6P30041 224 aa10.02□□□□□ -0.8
MSH2-202ENST00000406134 CLCNKBP51801 687 aa10.02□□□□□ -0.8
MSH2-202ENST00000406134 AIF1P55008 147 aa10.02□□□□□ -0.8
MSH2-202ENST00000406134 GSTA3Q16772 222 aa10.02□□□□□ -0.8
MSH2-202ENST00000406134 MORN1Q5T089 497 aa10.02□□□□□ -0.8
MSH2-202ENST00000406134 THEMIS2Q5TEJ8 643 aa10.02□□□□□ -0.8
MSH2-202ENST00000406134 MANEALQ5VSG8 457 aa10.02□□□□□ -0.8
MSH2-202ENST00000406134 USP50Q70EL3 339 aaPredicted RBP10.02□□□□□ -0.8
MSH2-202ENST00000406134 ARHGAP24Q8N264 748 aa10.02□□□□□ -0.8
MSH2-202ENST00000406134 FBXW8Q8N3Y1 598 aa10.02□□□□□ -0.8
MSH2-202ENST00000406134 LENG8Q96PV6 779 aaPredicted RBP10.02□□□□□ -0.8
MSH2-202ENST00000406134 COLEC11Q9BWP8 271 aa10.02□□□□□ -0.8
MSH2-202ENST00000406134 OSBPL2Q9H1P3 480 aa10.02□□□□□ -0.8
MSH2-202ENST00000406134 ANGPTL2Q9UKU9 493 aa10.02□□□□□ -0.8
MSH2-202ENST00000406134 APOBEC2Q9Y235 224 aaKnown RBP10.02□□□□□ -0.8
MSH2-202ENST00000406134 RAD54BQ9Y620 910 aa10.02□□□□□ -0.8
MSH2-202ENST00000406134 ENO4A6NNW6 628 aa10.02□□□□□ -0.81
MSH2-202ENST00000406134 HUS1O60921 280 aa10.02□□□□□ -0.81
MSH2-202ENST00000406134 AHSGP02765 367 aa10.02□□□□□ -0.81
MSH2-202ENST00000406134 ADRA1AP35348 466 aa10.02□□□□□ -0.81
MSH2-202ENST00000406134 CDK7P50613 346 aa10.02□□□□□ -0.81
MSH2-202ENST00000406134 IFRD2Q12894 506 aaPredicted RBP10.02□□□□□ -0.81
MSH2-202ENST00000406134 TICAM1Q8IUC6 712 aa10.02□□□□□ -0.81
MSH2-202ENST00000406134 DEFB107AQ8IZN7 70 aa10.02□□□□□ -0.81
MSH2-202ENST00000406134 SPATA22Q8NHS9 363 aa10.02□□□□□ -0.81
MSH2-202ENST00000406134 NR1H4Q96RI1 486 aaPredicted RBP10.02□□□□□ -0.81
MSH2-202ENST00000406134 DRC3Q9H069 523 aa10.02□□□□□ -0.81
MSH2-202ENST00000406134 KLHL8Q9P2G9 620 aaPredicted RBP10.02□□□□□ -0.81
MSH2-202ENST00000406134 PACSIN3Q9UKS6 424 aa10.02□□□□□ -0.81
MSH2-202ENST00000406134 MAGED2Q9UNF1 606 aaPredicted RBP10.02□□□□□ -0.81
MSH2-202ENST00000406134 MTF2Q9Y483 593 aaPredicted RBP10.02□□□□□ -0.81
MSH2-202ENST00000406134 TIMM13Q9Y5L4 95 aaPredicted RBP10.02□□□□□ -0.81
MSH2-202ENST00000406134 FKBP6O75344 327 aa10.02□□□□□ -0.81
MSH2-202ENST00000406134 MPOP05164 745 aa10.02□□□□□ -0.81
MSH2-202ENST00000406134 SKIP12755 728 aa10.02□□□□□ -0.81
MSH2-202ENST00000406134 AP2B1P63010 937 aa10.02□□□□□ -0.81
MSH2-202ENST00000406134 ZYG11AQ6WRX3 759 aa10.02□□□□□ -0.81
MSH2-202ENST00000406134 TAC4Q86UU9 113 aa10.02□□□□□ -0.81
MSH2-202ENST00000406134 CPSF7Q8N684 471 aaKnown RBP10.02□□□□□ -0.81
MSH2-202ENST00000406134 SH3RF2Q8TEC5 729 aa10.02□□□□□ -0.81
MSH2-202ENST00000406134 ZC3H15Q8WU90 426 aaKnown RBP10.02□□□□□ -0.81
MSH2-202ENST00000406134 GTF3C2Q8WUA4 911 aaPredicted RBP10.02□□□□□ -0.81
MSH2-202ENST00000406134 TSPAN18Q96SJ8 248 aa10.02□□□□□ -0.81
MSH2-202ENST00000406134 IL22Q9GZX6 179 aa10.02□□□□□ -0.81
MSH2-202ENST00000406134 NMRAL1Q9HBL8 299 aa10.02□□□□□ -0.81
MSH2-202ENST00000406134 IARS2Q9NSE4 1012 aaKnown RBP10.02□□□□□ -0.81
MSH2-202ENST00000406134 NDE1Q9NXR1 346 aa10.02□□□□□ -0.81
MSH2-202ENST00000406134 AURKAO14965 403 aa10.01□□□□□ -0.81
MSH2-202ENST00000406134 DYNC1LI2O43237 492 aaPredicted RBP10.01□□□□□ -0.81
MSH2-202ENST00000406134 MT-CYBP00156 380 aaPredicted RBP10.01□□□□□ -0.81
MSH2-202ENST00000406134 EPHX2P34913 555 aa10.01□□□□□ -0.81
MSH2-202ENST00000406134 CCNA1P78396 465 aa10.01□□□□□ -0.81
MSH2-202ENST00000406134 MPP1Q00013 466 aa10.01□□□□□ -0.81
MSH2-202ENST00000406134 ZNF423Q2M1K9 1284 aa10.01□□□□□ -0.81
MSH2-202ENST00000406134 C11orf91Q3C1V1 193 aa10.01□□□□□ -0.81
MSH2-202ENST00000406134 LSM12Q3MHD2 195 aaKnown RBP10.01□□□□□ -0.81
MSH2-202ENST00000406134 TMEM198Q66K66 360 aa10.01□□□□□ -0.81
MSH2-202ENST00000406134 DENND6AQ8IWF6 608 aa10.01□□□□□ -0.81
MSH2-202ENST00000406134 TDRD5Q8NAT2 981 aaKnown RBP10.01□□□□□ -0.81
MSH2-202ENST00000406134 STYXQ8WUJ0 223 aa10.01□□□□□ -0.81
MSH2-202ENST00000406134 EDEM1Q92611 657 aa10.01□□□□□ -0.81
MSH2-202ENST00000406134 TSGA13Q96PP4 275 aa10.01□□□□□ -0.81
MSH2-202ENST00000406134 RTKNQ9BST9 563 aa10.01□□□□□ -0.81
MSH2-202ENST00000406134 FTHL17Q9BXU8 183 aa10.01□□□□□ -0.81
MSH2-202ENST00000406134 CNGB3Q9NQW8 809 aa10.01□□□□□ -0.81
MSH2-202ENST00000406134 CPSF2Q9P2I0 782 aaKnown RBP10.01□□□□□ -0.81
MSH2-202ENST00000406134 SLC2A6Q9UGQ3 507 aa10.01□□□□□ -0.81
MSH2-202ENST00000406134 LOC100653049A0A140TA62 436 aa10.01□□□□□ -0.81
MSH2-202ENST00000406134 KRT34O76011 436 aa10.01□□□□□ -0.81
MSH2-202ENST00000406134 SMIM18P0DKX4 95 aa10.01□□□□□ -0.81
MSH2-202ENST00000406134 HOXC13P31276 330 aa10.01□□□□□ -0.81
MSH2-202ENST00000406134 PEX19P40855 299 aa10.01□□□□□ -0.81
MSH2-202ENST00000406134 CRYBB1P53674 252 aaPredicted RBP10.01□□□□□ -0.81
MSH2-202ENST00000406134 TPI1P60174 286 aa10.01□□□□□ -0.81
MSH2-202ENST00000406134 PIGGQ5H8A4 983 aa10.01□□□□□ -0.81
MSH2-202ENST00000406134 INTS6LQ5JSJ4 861 aaKnown RBP10.01□□□□□ -0.81
MSH2-202ENST00000406134 OGFRL1Q5TC84 451 aaPredicted RBP10.01□□□□□ -0.81
MSH2-202ENST00000406134 AFMIDQ63HM1 303 aa10.01□□□□□ -0.81
MSH2-202ENST00000406134 CYHR1Q6ZMK1 362 aa10.01□□□□□ -0.81
MSH2-202ENST00000406134 TLK2Q86UE8 772 aa10.01□□□□□ -0.81
MSH2-202ENST00000406134 AGR3Q8TD06 166 aa10.01□□□□□ -0.81
MSH2-202ENST00000406134 CELF6Q96J87 481 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms