RNA–Protein interactions for RNA: ENST00000406109.5

RPA3-204, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-204ENST00000406109 IFNKQ9P0W0 207 aa6.4□□□□□ -1.38
RPA3-204ENST00000406109 TSR3Q9UJK0 312 aaKnown RBP6.4□□□□□ -1.38
RPA3-204ENST00000406109 GGA2Q9UJY4 613 aa6.4□□□□□ -1.38
RPA3-204ENST00000406109 INTS6Q9UL03 887 aaKnown RBP6.4□□□□□ -1.38
RPA3-204ENST00000406109 CLCA2Q9UQC9 943 aa6.4□□□□□ -1.38
RPA3-204ENST00000406109 ABCA12Q86UK0 2595 aa6.4□□□□□ -1.39
RPA3-204ENST00000406109 UNC13CQ8NB66 2214 aa6.4□□□□□ -1.39
RPA3-204ENST00000406109 NYNRINQ9P2P1 1898 aaKnown RBP6.39□□□□□ -1.39
RPA3-204ENST00000406109 TRPM6Q9BX84 2022 aa6.39□□□□□ -1.39
RPA3-204ENST00000406109 LY6G6EA0A0G2JKS1 128 aa6.39□□□□□ -1.39
RPA3-204ENST00000406109 A0A1W2PP55 124 aa6.39□□□□□ -1.39
RPA3-204ENST00000406109 YJEFN3A6XGL0 299 aa6.39□□□□□ -1.39
RPA3-204ENST00000406109 E7ENQ6 273 aa6.39□□□□□ -1.39
RPA3-204ENST00000406109 YKT6O15498 198 aa6.39□□□□□ -1.39
RPA3-204ENST00000406109 LATO43561 262 aa6.39□□□□□ -1.39
RPA3-204ENST00000406109 SIGLEC6O43699 453 aa6.39□□□□□ -1.39
RPA3-204ENST00000406109 SIN3BO75182 1162 aa6.39□□□□□ -1.39
RPA3-204ENST00000406109 MT-CO3P00414 261 aa6.39□□□□□ -1.39
RPA3-204ENST00000406109 MPOP05164 745 aa6.39□□□□□ -1.39
RPA3-204ENST00000406109 MMEP08473 750 aa6.39□□□□□ -1.39
RPA3-204ENST00000406109 GIMD1P0DJR0 217 aa6.39□□□□□ -1.39
RPA3-204ENST00000406109 PABPC1P11940 636 aaKnown RBP6.39□□□□□ -1.39
RPA3-204ENST00000406109 SLC6A4P31645 630 aa6.39□□□□□ -1.39
RPA3-204ENST00000406109 ACADSBP45954 432 aa6.39□□□□□ -1.39
RPA3-204ENST00000406109 ARRB1P49407 418 aaPredicted RBP6.39□□□□□ -1.39
RPA3-204ENST00000406109 CCR5P51681 352 aa6.39□□□□□ -1.39
RPA3-204ENST00000406109 METAP1P53582 386 aa6.39□□□□□ -1.39
RPA3-204ENST00000406109 ADPRHP54922 357 aa6.39□□□□□ -1.39
RPA3-204ENST00000406109 JAM2P57087 298 aa6.39□□□□□ -1.39
RPA3-204ENST00000406109 PCBP4P57723 403 aaKnown RBP6.39□□□□□ -1.39
RPA3-204ENST00000406109 TMPRSS3P57727 454 aa6.39□□□□□ -1.39
RPA3-204ENST00000406109 ZNF445P59923 1031 aa6.39□□□□□ -1.39
RPA3-204ENST00000406109 PPP2CBP62714 309 aa6.39□□□□□ -1.39
RPA3-204ENST00000406109 PPP2CAP67775 309 aa6.39□□□□□ -1.39
RPA3-204ENST00000406109 SKOR1P84550 965 aa6.39□□□□□ -1.39
RPA3-204ENST00000406109 ARID5BQ14865 1188 aa6.39□□□□□ -1.39
RPA3-204ENST00000406109 CST6Q15828 149 aa6.39□□□□□ -1.39
RPA3-204ENST00000406109 HNRNPA1L2Q32P51 320 aaKnown RBP6.39□□□□□ -1.39
RPA3-204ENST00000406109 TTC31Q49AM3 519 aaPredicted RBP6.39□□□□□ -1.39
RPA3-204ENST00000406109 MPPE1Q53F39 396 aa6.39□□□□□ -1.39
RPA3-204ENST00000406109 FAM133BQ5BKY9 247 aaKnown RBP6.39□□□□□ -1.39
RPA3-204ENST00000406109 ADGRF1Q5T601 910 aa6.39□□□□□ -1.39
RPA3-204ENST00000406109 BSPRYQ5W0U4 402 aa6.39□□□□□ -1.39
RPA3-204ENST00000406109 RFWD3Q6PCD5 774 aa6.39□□□□□ -1.39
RPA3-204ENST00000406109 KDM7AQ6ZMT4 941 aa6.39□□□□□ -1.39
RPA3-204ENST00000406109 TMEM110Q86TL2 294 aa6.39□□□□□ -1.39
RPA3-204ENST00000406109 MMAAQ8IVH4 418 aaKnown RBP6.39□□□□□ -1.39
RPA3-204ENST00000406109 AHI1Q8N157 1196 aa6.39□□□□□ -1.39
RPA3-204ENST00000406109 TMEM35BQ8NCS4 154 aa6.39□□□□□ -1.39
RPA3-204ENST00000406109 ZNF248Q8NDW4 579 aa6.39□□□□□ -1.39
RPA3-204ENST00000406109 OR2T34Q8NGX1 318 aa6.39□□□□□ -1.39
RPA3-204ENST00000406109 CLEC4CQ8WTT0 213 aa6.39□□□□□ -1.39
RPA3-204ENST00000406109 STK32AQ8WU08 396 aa6.39□□□□□ -1.39
RPA3-204ENST00000406109 RNF139Q8WU17 664 aa6.39□□□□□ -1.39
RPA3-204ENST00000406109 CPLX3Q8WVH0 158 aa6.39□□□□□ -1.39
RPA3-204ENST00000406109 GOLGA1Q92805 767 aa6.39□□□□□ -1.39
RPA3-204ENST00000406109 FAM131CQ96AQ9 280 aa6.39□□□□□ -1.39
RPA3-204ENST00000406109 PLD4Q96BZ4 506 aa6.39□□□□□ -1.39
RPA3-204ENST00000406109 TMA16Q96EY4 203 aaKnown RBP6.39□□□□□ -1.39
RPA3-204ENST00000406109 SERAC1Q96JX3 654 aa6.39□□□□□ -1.39
RPA3-204ENST00000406109 ZNF578Q96N58 590 aaPredicted RBP6.39□□□□□ -1.39
RPA3-204ENST00000406109 LGMNQ99538 433 aa6.39□□□□□ -1.39
RPA3-204ENST00000406109 SYNCQ9H7C4 482 aa6.39□□□□□ -1.39
RPA3-204ENST00000406109 CNGB3Q9NQW8 809 aa6.39□□□□□ -1.39
RPA3-204ENST00000406109 GDF3Q9NR23 364 aa6.39□□□□□ -1.39
RPA3-204ENST00000406109 AASDHPPTQ9NRN7 309 aa6.39□□□□□ -1.39
RPA3-204ENST00000406109 ABCC13Q9NSE7 274 aa6.39□□□□□ -1.39
RPA3-204ENST00000406109 IGSF5Q9NSI5 407 aa6.39□□□□□ -1.39
RPA3-204ENST00000406109 SUN2Q9UH99 717 aa6.39□□□□□ -1.39
RPA3-204ENST00000406109 SFMBT1Q9UHJ3 866 aa6.39□□□□□ -1.39
RPA3-204ENST00000406109 CYTH4Q9UIA0 394 aa6.39□□□□□ -1.39
RPA3-204ENST00000406109 SCML1Q9UN30 329 aa6.39□□□□□ -1.39
RPA3-204ENST00000406109 PCDHGC3Q9UN70 934 aa6.39□□□□□ -1.39
RPA3-204ENST00000406109 DAAM1Q9Y4D1 1078 aa6.39□□□□□ -1.39
RPA3-204ENST00000406109 CEP83Q9Y592 693 aa6.39□□□□□ -1.39
RPA3-204ENST00000406109 U3KQA8 63 aa6.39□□□□□ -1.39
RPA3-204ENST00000406109 POLQO75417 2590 aa6.38□□□□□ -1.39
RPA3-204ENST00000406109 GOLGA6L7A0A1B0GV03 622 aa6.38□□□□□ -1.39
RPA3-204ENST00000406109 A0A1W2PQC6 194 aa6.38□□□□□ -1.39
RPA3-204ENST00000406109 LRRC72A6NJI9 287 aa6.38□□□□□ -1.39
RPA3-204ENST00000406109 TTC34A8MYJ7 566 aa6.38□□□□□ -1.39
RPA3-204ENST00000406109 E5RJQ4 531 aa6.38□□□□□ -1.39
RPA3-204ENST00000406109 MSI1O43347 362 aaKnown RBP6.38□□□□□ -1.39
RPA3-204ENST00000406109 CBFA2T2O43439 604 aa6.38□□□□□ -1.39
RPA3-204ENST00000406109 RNASEH2AO75792 299 aaKnown RBP6.38□□□□□ -1.39
RPA3-204ENST00000406109 FBXO21O94952 628 aa6.38□□□□□ -1.39
RPA3-204ENST00000406109 IGLV3-27P01718 113 aa6.38□□□□□ -1.39
RPA3-204ENST00000406109 ATP5BP06576 529 aaKnown RBP6.38□□□□□ -1.39
RPA3-204ENST00000406109 CCDC172P0C7W6 258 aa6.38□□□□□ -1.39
RPA3-204ENST00000406109 FERP16591 822 aa6.38□□□□□ -1.39
RPA3-204ENST00000406109 GOT1P17174 413 aa6.38□□□□□ -1.39
RPA3-204ENST00000406109 TNFAIP3P21580 790 aa6.38□□□□□ -1.39
RPA3-204ENST00000406109 DRD3P35462 400 aa6.38□□□□□ -1.39
RPA3-204ENST00000406109 CSKP41240 450 aa6.38□□□□□ -1.39
RPA3-204ENST00000406109 CTSOP43234 321 aaPredicted RBP6.38□□□□□ -1.39
RPA3-204ENST00000406109 LSSP48449 732 aa6.38□□□□□ -1.39
RPA3-204ENST00000406109 RPL34P49207 117 aaKnown RBP6.38□□□□□ -1.39
RPA3-204ENST00000406109 HARS2P49590 506 aaKnown RBP6.38□□□□□ -1.39
RPA3-204ENST00000406109 SNX16P57768 344 aa6.38□□□□□ -1.39
RPA3-204ENST00000406109 DAOAP59103 153 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms