RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 RSPH14Q9UHP6 348 aa21.44■■□□□ 1.02
TPM1-208ENST00000404484 ARHGAP26Q9UNA1 814 aa21.44■■□□□ 1.02
TPM1-208ENST00000404484 SH3BP1Q9Y3L3 701 aa21.44■■□□□ 1.02
TPM1-208ENST00000404484 ZFP37Q9Y6Q3 630 aaPredicted RBP21.44■■□□□ 1.02
TPM1-208ENST00000404484 ZNF197O14709 1029 aa21.44■■□□□ 1.02
TPM1-208ENST00000404484 NEBLO76041 1014 aa21.44■■□□□ 1.02
TPM1-208ENST00000404484 JCHAINP01591 159 aa21.44■■□□□ 1.02
TPM1-208ENST00000404484 ABHD2P08910 425 aa21.44■■□□□ 1.02
TPM1-208ENST00000404484 PSMB4P28070 264 aa21.44■■□□□ 1.02
TPM1-208ENST00000404484 ZBTB17Q13105 803 aa21.44■■□□□ 1.02
TPM1-208ENST00000404484 SLC29A2Q14542 456 aa21.44■■□□□ 1.02
TPM1-208ENST00000404484 GPR158Q5T848 1215 aa21.44■■□□□ 1.02
TPM1-208ENST00000404484 Q6ZNB5 142 aa21.44■■□□□ 1.02
TPM1-208ENST00000404484 HMCESQ96FZ2 354 aa21.44■■□□□ 1.02
TPM1-208ENST00000404484 IL12RB2Q99665 862 aa21.44■■□□□ 1.02
TPM1-208ENST00000404484 MAGEH1Q9H213 219 aa21.44■■□□□ 1.02
TPM1-208ENST00000404484 EPHX3Q9H6B9 360 aa21.44■■□□□ 1.02
TPM1-208ENST00000404484 TASP1Q9H6P5 420 aa21.44■■□□□ 1.02
TPM1-208ENST00000404484 SP110Q9HB58 689 aa21.44■■□□□ 1.02
TPM1-208ENST00000404484 DNMT3BQ9UBC3 853 aaKnown RBP21.44■■□□□ 1.02
TPM1-208ENST00000404484 NFS1Q9Y697 457 aa21.44■■□□□ 1.02
TPM1-208ENST00000404484 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.43■■□□□ 1.02
TPM1-208ENST00000404484 GOLGA8KD6RF30 607 aa21.43■■□□□ 1.02
TPM1-208ENST00000404484 PSMD3O43242 534 aa21.43■■□□□ 1.02
TPM1-208ENST00000404484 TSHRP16473 764 aa21.43■■□□□ 1.02
TPM1-208ENST00000404484 ETFBP38117 255 aa21.43■■□□□ 1.02
TPM1-208ENST00000404484 ZNF177Q13360 481 aaPredicted RBP21.43■■□□□ 1.02
TPM1-208ENST00000404484 KYNUQ16719 465 aa21.43■■□□□ 1.02
TPM1-208ENST00000404484 CEP85LQ5SZL2 805 aa21.43■■□□□ 1.02
TPM1-208ENST00000404484 HTR3DQ70Z44 454 aa21.43■■□□□ 1.02
TPM1-208ENST00000404484 OTOP3Q7RTS5 596 aa21.43■■□□□ 1.02
TPM1-208ENST00000404484 SETD3Q86TU7 594 aaPredicted RBP21.43■■□□□ 1.02
TPM1-208ENST00000404484 CIR1Q86X95 450 aaPredicted RBP21.43■■□□□ 1.02
TPM1-208ENST00000404484 ZNF354CQ86Y25 554 aa21.43■■□□□ 1.02
TPM1-208ENST00000404484 ZBED8Q8IZ13 594 aa21.43■■□□□ 1.02
TPM1-208ENST00000404484 HJURPQ8NCD3 748 aaPredicted RBP21.43■■□□□ 1.02
TPM1-208ENST00000404484 MAML1Q92585 1016 aa21.43■■□□□ 1.02
TPM1-208ENST00000404484 LRRC39Q96DD0 335 aa21.43■■□□□ 1.02
TPM1-208ENST00000404484 PRICKLE1Q96MT3 831 aaPredicted RBP21.43■■□□□ 1.02
TPM1-208ENST00000404484 AGAP3Q96P47 875 aa21.43■■□□□ 1.02
TPM1-208ENST00000404484 SERPINB12Q96P63 405 aa21.43■■□□□ 1.02
TPM1-208ENST00000404484 CEP41Q9BYV8 373 aa21.43■■□□□ 1.02
TPM1-208ENST00000404484 LIMD1Q9UGP4 676 aa21.43■■□□□ 1.02
TPM1-208ENST00000404484 MUTYHQ9UIF7 546 aa21.43■■□□□ 1.02
TPM1-208ENST00000404484 SHROOM3Q8TF72 1996 aa21.43■■□□□ 1.02
TPM1-208ENST00000404484 ZBTB24O43167 697 aaPredicted RBP21.42■■□□□ 1.02
TPM1-208ENST00000404484 ACSL3O95573 720 aa21.42■■□□□ 1.02
TPM1-208ENST00000404484 MYZAPP0CAP1 466 aa21.42■■□□□ 1.02
TPM1-208ENST00000404484 MLNP12872 115 aa21.42■■□□□ 1.02
TPM1-208ENST00000404484 AVPR1AP37288 418 aa21.42■■□□□ 1.02
TPM1-208ENST00000404484 RENBPP51606 427 aa21.42■■□□□ 1.02
TPM1-208ENST00000404484 IL10RBQ08334 325 aa21.42■■□□□ 1.02
TPM1-208ENST00000404484 HNRNPDQ14103 355 aaKnown RBP21.42■■□□□ 1.02
TPM1-208ENST00000404484 BBS9Q3SYG4 887 aa21.42■■□□□ 1.02
TPM1-208ENST00000404484 ARHGAP36Q6ZRI8 547 aa21.42■■□□□ 1.02
TPM1-208ENST00000404484 FAM217AQ8IXS0 508 aa21.42■■□□□ 1.02
TPM1-208ENST00000404484 CFAP52Q8N1V2 620 aa21.42■■□□□ 1.02
TPM1-208ENST00000404484 TDRD5Q8NAT2 981 aaKnown RBP21.42■■□□□ 1.02
TPM1-208ENST00000404484 PYROXD1Q8WU10 500 aa21.42■■□□□ 1.02
TPM1-208ENST00000404484 MYEOVQ96EZ4 313 aa21.42■■□□□ 1.02
TPM1-208ENST00000404484 C9orf72Q96LT7 481 aa21.42■■□□□ 1.02
TPM1-208ENST00000404484 CCDC77Q9BR77 488 aa21.42■■□□□ 1.02
TPM1-208ENST00000404484 SLC46A2Q9BY10 475 aa21.42■■□□□ 1.02
TPM1-208ENST00000404484 HAUS2Q9NVX0 235 aa21.42■■□□□ 1.02
TPM1-208ENST00000404484 CFAP97Q9P2B7 532 aa21.42■■□□□ 1.02
TPM1-208ENST00000404484 IVLP07476 585 aa21.41■■□□□ 1.02
TPM1-208ENST00000404484 RPS24P62847 133 aaKnown RBP21.41■■□□□ 1.02
TPM1-208ENST00000404484 ZNF844Q08AG5 666 aa21.41■■□□□ 1.02
TPM1-208ENST00000404484 SERINC3Q13530 473 aa21.41■■□□□ 1.02
TPM1-208ENST00000404484 CCDC38Q502W7 563 aa21.41■■□□□ 1.02
TPM1-208ENST00000404484 FNBP1LQ5T0N5 605 aa21.41■■□□□ 1.02
TPM1-208ENST00000404484 ZNF783Q6ZMS7 281 aa21.41■■□□□ 1.02
TPM1-208ENST00000404484 CPXM2Q8N436 756 aa21.41■■□□□ 1.02
TPM1-208ENST00000404484 ATP11CQ8NB49 1132 aa21.41■■□□□ 1.02
TPM1-208ENST00000404484 ZSCAN18Q8TBC5 510 aaPredicted RBP21.41■■□□□ 1.02
TPM1-208ENST00000404484 WBP2Q969T9 261 aa21.41■■□□□ 1.02
TPM1-208ENST00000404484 MYADMQ96S97 322 aa21.41■■□□□ 1.02
TPM1-208ENST00000404484 TMEM109Q9BVC6 243 aa21.41■■□□□ 1.02
TPM1-208ENST00000404484 NOTCH4Q99466 2003 aa21.41■■□□□ 1.02
TPM1-208ENST00000404484 ILVBLA1L0T0 632 aa21.4■■□□□ 1.02
TPM1-208ENST00000404484 GREM1O60565 184 aa21.4■■□□□ 1.02
TPM1-208ENST00000404484 SYF2O95926 243 aaKnown RBP21.4■■□□□ 1.02
TPM1-208ENST00000404484 GJA1P17302 382 aa21.4■■□□□ 1.02
TPM1-208ENST00000404484 FSHRP23945 695 aa21.4■■□□□ 1.02
TPM1-208ENST00000404484 OAS2P29728 719 aaKnown RBP21.4■■□□□ 1.02
TPM1-208ENST00000404484 PHBP35232 272 aa21.4■■□□□ 1.02
TPM1-208ENST00000404484 CCR2P41597 374 aa21.4■■□□□ 1.02
TPM1-208ENST00000404484 IFNAR2P48551 515 aa21.4■■□□□ 1.02
TPM1-208ENST00000404484 GNA12Q03113 381 aa21.4■■□□□ 1.02
TPM1-208ENST00000404484 GAD2Q05329 585 aa21.4■■□□□ 1.02
TPM1-208ENST00000404484 TEAD2Q15562 447 aa21.4■■□□□ 1.02
TPM1-208ENST00000404484 CMTM8Q8IZV2 173 aa21.4■■□□□ 1.02
TPM1-208ENST00000404484 PLCD3Q8N3E9 789 aa21.4■■□□□ 1.02
TPM1-208ENST00000404484 ZNF599Q96NL3 588 aa21.4■■□□□ 1.02
TPM1-208ENST00000404484 ROPN1BQ9BZX4 212 aaPredicted RBP21.4■■□□□ 1.02
TPM1-208ENST00000404484 ROPN1Q9HAT0 212 aaPredicted RBP21.4■■□□□ 1.02
TPM1-208ENST00000404484 AAR2Q9Y312 384 aaKnown RBP21.4■■□□□ 1.02
TPM1-208ENST00000404484 DOCK8Q8NF50 2099 aa21.4■■□□□ 1.02
TPM1-208ENST00000404484 NYNRINQ9P2P1 1898 aaKnown RBP21.4■■□□□ 1.02
TPM1-208ENST00000404484 A0A087WUV0 522 aaPredicted RBP21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms