RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 PIP5K1AQ99755 562 aa4.19□□□□□ -1.74
HMGB1P17-201ENST00000403495 SDF4Q9BRK5 362 aa4.19□□□□□ -1.74
HMGB1P17-201ENST00000403495 NUF2Q9BZD4 464 aa4.19□□□□□ -1.74
HMGB1P17-201ENST00000403495 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.19□□□□□ -1.74
HMGB1P17-201ENST00000403495 R3HDMLQ9H3Y0 253 aa4.19□□□□□ -1.74
HMGB1P17-201ENST00000403495 TBC1D22BQ9NU19 505 aa4.19□□□□□ -1.74
HMGB1P17-201ENST00000403495 IL1RAPL1Q9NZN1 696 aa4.19□□□□□ -1.74
HMGB1P17-201ENST00000403495 HSPB7Q9UBY9 170 aa4.19□□□□□ -1.74
HMGB1P17-201ENST00000403495 PLEKHB1Q9UF11 243 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P17-201ENST00000403495 SWAP70Q9UH65 585 aa4.19□□□□□ -1.74
HMGB1P17-201ENST00000403495 ZNHIT2Q9UHR6 403 aa4.19□□□□□ -1.74
HMGB1P17-201ENST00000403495 DHDHQ9UQ10 334 aa4.19□□□□□ -1.74
HMGB1P17-201ENST00000403495 TNFSF13BQ9Y275 285 aa4.19□□□□□ -1.74
HMGB1P17-201ENST00000403495 INSL6Q9Y581 213 aa4.19□□□□□ -1.74
HMGB1P17-201ENST00000403495 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P17-201ENST00000403495 OR6C68A6NDL8 312 aa4.18□□□□□ -1.74
HMGB1P17-201ENST00000403495 KCNJ18B7U540 433 aa4.18□□□□□ -1.74
HMGB1P17-201ENST00000403495 SLC25A17O43808 307 aa4.18□□□□□ -1.74
HMGB1P17-201ENST00000403495 DDAH2O95865 285 aa4.18□□□□□ -1.74
HMGB1P17-201ENST00000403495 WNT1P04628 370 aa4.18□□□□□ -1.74
HMGB1P17-201ENST00000403495 CHRM4P08173 479 aa4.18□□□□□ -1.74
HMGB1P17-201ENST00000403495 MPGP29372 298 aa4.18□□□□□ -1.74
HMGB1P17-201ENST00000403495 SOX10P56693 466 aa4.18□□□□□ -1.74
HMGB1P17-201ENST00000403495 TMPRSS3P57727 454 aa4.18□□□□□ -1.74
HMGB1P17-201ENST00000403495 RPS3AP61247 264 aaKnown RBP4.18□□□□□ -1.74
HMGB1P17-201ENST00000403495 SETQ01105 290 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P17-201ENST00000403495 NEXNQ0ZGT2 675 aa4.18□□□□□ -1.74
HMGB1P17-201ENST00000403495 ME3Q16798 604 aa4.18□□□□□ -1.74
HMGB1P17-201ENST00000403495 FAM205BPQ63HN1 556 aa4.18□□□□□ -1.74
HMGB1P17-201ENST00000403495 TMEM81Q6P7N7 255 aa4.18□□□□□ -1.74
HMGB1P17-201ENST00000403495 TMTC3Q6ZXV5 915 aa4.18□□□□□ -1.74
HMGB1P17-201ENST00000403495 PXKQ7Z7A4 578 aa4.18□□□□□ -1.74
HMGB1P17-201ENST00000403495 NEK8Q86SG6 692 aa4.18□□□□□ -1.74
HMGB1P17-201ENST00000403495 TRIM74Q86UV6 250 aa4.18□□□□□ -1.74
HMGB1P17-201ENST00000403495 TRIM73Q86UV7 250 aa4.18□□□□□ -1.74
HMGB1P17-201ENST00000403495 NME8Q8N427 588 aa4.18□□□□□ -1.74
HMGB1P17-201ENST00000403495 C8orf58Q8NAV2 365 aa4.18□□□□□ -1.74
HMGB1P17-201ENST00000403495 FAM98AQ8NCA5 519 aaKnown RBP4.18□□□□□ -1.74
HMGB1P17-201ENST00000403495 CMASQ8NFW8 434 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P17-201ENST00000403495 ZCCHC10Q8TBK6 192 aa4.18□□□□□ -1.74
HMGB1P17-201ENST00000403495 IGFBPL1Q8WX77 278 aa4.18□□□□□ -1.74
HMGB1P17-201ENST00000403495 KAT2BQ92831 832 aa4.18□□□□□ -1.74
HMGB1P17-201ENST00000403495 SH3KBP1Q96B97 665 aa4.18□□□□□ -1.74
HMGB1P17-201ENST00000403495 P2RY11Q96G91 374 aa4.18□□□□□ -1.74
HMGB1P17-201ENST00000403495 NR1H4Q96RI1 486 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P17-201ENST00000403495 ITPAQ9BY32 194 aa4.18□□□□□ -1.74
HMGB1P17-201ENST00000403495 PCED1AQ9H1Q7 454 aa4.18□□□□□ -1.74
HMGB1P17-201ENST00000403495 SNTG1Q9NSN8 517 aa4.18□□□□□ -1.74
HMGB1P17-201ENST00000403495 TAS2R10Q9NYW0 307 aa4.18□□□□□ -1.74
HMGB1P17-201ENST00000403495 KCND2Q9NZV8 630 aa4.18□□□□□ -1.74
HMGB1P17-201ENST00000403495 CDH22Q9UJ99 828 aa4.18□□□□□ -1.74
HMGB1P17-201ENST00000403495 FBXO2Q9UK22 296 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P17-201ENST00000403495 UTS2RQ9UKP6 389 aa4.18□□□□□ -1.74
HMGB1P17-201ENST00000403495 MKLN1Q9UL63 735 aa4.18□□□□□ -1.74
HMGB1P17-201ENST00000403495 OSGIN2Q9Y236 505 aa4.18□□□□□ -1.74
HMGB1P17-201ENST00000403495 PSAT1Q9Y617 370 aa4.18□□□□□ -1.74
HMGB1P17-201ENST00000403495 GAGE10A6NGK3 116 aa4.17□□□□□ -1.74
HMGB1P17-201ENST00000403495 DDTLA6NHG4 134 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P17-201ENST00000403495 SEC31AO94979 1220 aaKnown RBP4.17□□□□□ -1.74
HMGB1P17-201ENST00000403495 IL1AP01583 271 aa4.17□□□□□ -1.74
HMGB1P17-201ENST00000403495 SLPIP03973 132 aa4.17□□□□□ -1.74
HMGB1P17-201ENST00000403495 TUBB4AP04350 444 aa4.17□□□□□ -1.74
HMGB1P17-201ENST00000403495 CLEC3BP05452 202 aa4.17□□□□□ -1.74
HMGB1P17-201ENST00000403495 GALTP07902 379 aa4.17□□□□□ -1.74
HMGB1P17-201ENST00000403495 SPARCP09486 303 aa4.17□□□□□ -1.74
HMGB1P17-201ENST00000403495 COX7A2P14406 83 aa4.17□□□□□ -1.74
HMGB1P17-201ENST00000403495 CIITAP33076 1130 aa4.17□□□□□ -1.74
HMGB1P17-201ENST00000403495 ABCD1P33897 745 aa4.17□□□□□ -1.74
HMGB1P17-201ENST00000403495 PBX3P40426 434 aa4.17□□□□□ -1.74
HMGB1P17-201ENST00000403495 ARHGAP25P42331 645 aa4.17□□□□□ -1.74
HMGB1P17-201ENST00000403495 CPA2P48052 419 aa4.17□□□□□ -1.74
HMGB1P17-201ENST00000403495 CTCFP49711 727 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P17-201ENST00000403495 INHBCP55103 352 aa4.17□□□□□ -1.74
HMGB1P17-201ENST00000403495 MED22Q15528 200 aa4.17□□□□□ -1.74
HMGB1P17-201ENST00000403495 C5orf22Q49AR2 442 aa4.17□□□□□ -1.74
HMGB1P17-201ENST00000403495 CEP78Q5JTW2 689 aa4.17□□□□□ -1.74
HMGB1P17-201ENST00000403495 TMEM63BQ5T3F8 832 aa4.17□□□□□ -1.74
HMGB1P17-201ENST00000403495 FBXO42Q6P3S6 717 aa4.17□□□□□ -1.74
HMGB1P17-201ENST00000403495 ZNF788Q6ZQV5 615 aa4.17□□□□□ -1.74
HMGB1P17-201ENST00000403495 NEK10Q6ZWH5 1172 aa4.17□□□□□ -1.74
HMGB1P17-201ENST00000403495 CPXM2Q8N436 756 aa4.17□□□□□ -1.74
HMGB1P17-201ENST00000403495 ZNF398Q8TD17 642 aa4.17□□□□□ -1.74
HMGB1P17-201ENST00000403495 ADAMTS15Q8TE58 950 aa4.17□□□□□ -1.74
HMGB1P17-201ENST00000403495 GDPD5Q8WTR4 605 aa4.17□□□□□ -1.74
HMGB1P17-201ENST00000403495 DDB2Q92466 427 aa4.17□□□□□ -1.74
HMGB1P17-201ENST00000403495 CUL5Q93034 780 aa4.17□□□□□ -1.74
HMGB1P17-201ENST00000403495 EME1Q96AY2 570 aa4.17□□□□□ -1.74
HMGB1P17-201ENST00000403495 KLHL29Q96CT2 875 aa4.17□□□□□ -1.74
HMGB1P17-201ENST00000403495 PIMREGQ9BSJ6 248 aa4.17□□□□□ -1.74
HMGB1P17-201ENST00000403495 IFT27Q9BW83 186 aa4.17□□□□□ -1.74
HMGB1P17-201ENST00000403495 GLIS2Q9BZE0 524 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P17-201ENST00000403495 PDCL3Q9H2J4 239 aa4.17□□□□□ -1.74
HMGB1P17-201ENST00000403495 HIPK3Q9H422 1215 aa4.17□□□□□ -1.74
HMGB1P17-201ENST00000403495 C20orf141Q9NUB4 165 aa4.17□□□□□ -1.74
HMGB1P17-201ENST00000403495 HCN3Q9P1Z3 774 aa4.17□□□□□ -1.74
HMGB1P17-201ENST00000403495 IPO11Q9UI26 975 aaKnown RBP4.17□□□□□ -1.74
HMGB1P17-201ENST00000403495 SCINQ9Y6U3 715 aa4.17□□□□□ -1.74
HMGB1P17-201ENST00000403495 KDM3AQ9Y4C1 1321 aa4.17□□□□□ -1.74
HMGB1P17-201ENST00000403495 GOLGA6L10A0A0M3HER8 536 aa4.16□□□□□ -1.74
HMGB1P17-201ENST00000403495 RHODO00212 210 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms