RNA–Protein interactions for RNA: ENST00000403433.5

CHTOP-205, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHTOP, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-205ENST00000403433 CDK7P50613 346 aa18.19■□□□□ 0.5
CHTOP-205ENST00000403433 NOGQ13253 232 aa18.19■□□□□ 0.5
CHTOP-205ENST00000403433 ANO4Q32M45 955 aa18.19■□□□□ 0.5
CHTOP-205ENST00000403433 CTXN3Q4LDR2 81 aa18.19■□□□□ 0.5
CHTOP-205ENST00000403433 PCID2Q5JVF3 399 aa18.19■□□□□ 0.5
CHTOP-205ENST00000403433 WLSQ5T9L3 541 aa18.19■□□□□ 0.5
CHTOP-205ENST00000403433 C14orf80Q86SX3 495 aa18.19■□□□□ 0.5
CHTOP-205ENST00000403433 LRRC49Q8IUZ0 686 aa18.19■□□□□ 0.5
CHTOP-205ENST00000403433 FAM13CQ8NE31 585 aa18.19■□□□□ 0.5
CHTOP-205ENST00000403433 PPHLN1Q8NEY8 458 aaKnown RBP18.19■□□□□ 0.5
CHTOP-205ENST00000403433 VPS39Q96JC1 886 aa18.19■□□□□ 0.5
CHTOP-205ENST00000403433 BTBD10Q9BSF8 475 aa18.19■□□□□ 0.5
CHTOP-205ENST00000403433 FSD1LQ9BXM9 530 aa18.19■□□□□ 0.5
CHTOP-205ENST00000403433 NDFIP2Q9NV92 336 aa18.19■□□□□ 0.5
CHTOP-205ENST00000403433 RBM22Q9NW64 420 aaKnown RBP eCLIP18.19■□□□□ 0.5
CHTOP-205ENST00000403433 MPP6Q9NZW5 540 aa18.19■□□□□ 0.5
CHTOP-205ENST00000403433 GMIPQ9P107 970 aa18.19■□□□□ 0.5
CHTOP-205ENST00000403433 FNIP2Q9P278 1114 aa18.19■□□□□ 0.5
CHTOP-205ENST00000403433 DNAJC16Q9Y2G8 782 aa18.19■□□□□ 0.5
CHTOP-205ENST00000403433 CCDC78A2IDD5 438 aa18.19■□□□□ 0.5
CHTOP-205ENST00000403433 LYPLA1O75608 230 aaPredicted RBP18.19■□□□□ 0.5
CHTOP-205ENST00000403433 HLA-DQB2P05538 268 aa18.19■□□□□ 0.5
CHTOP-205ENST00000403433 F7P08709 466 aaPredicted RBP18.19■□□□□ 0.5
CHTOP-205ENST00000403433 GRK4P32298 578 aa18.19■□□□□ 0.5
CHTOP-205ENST00000403433 MAGEA11P43364 429 aa18.19■□□□□ 0.5
CHTOP-205ENST00000403433 ABCG1P45844 678 aa18.19■□□□□ 0.5
CHTOP-205ENST00000403433 PAPOLAP51003 745 aaKnown RBP18.19■□□□□ 0.5
CHTOP-205ENST00000403433 TBX4P57082 545 aa18.19■□□□□ 0.5
CHTOP-205ENST00000403433 PKN3Q6P5Z2 889 aa18.19■□□□□ 0.5
CHTOP-205ENST00000403433 ABI1Q8IZP0 508 aa18.19■□□□□ 0.5
CHTOP-205ENST00000403433 PIWIL2Q8TC59 973 aaKnown RBP18.19■□□□□ 0.5
CHTOP-205ENST00000403433 RAET1EQ8TD07 263 aa18.19■□□□□ 0.5
CHTOP-205ENST00000403433 ZNF419Q96HQ0 510 aaPredicted RBP18.19■□□□□ 0.5
CHTOP-205ENST00000403433 C1orf74Q96LT6 269 aa18.19■□□□□ 0.5
CHTOP-205ENST00000403433 RILPQ96NA2 401 aa18.19■□□□□ 0.5
CHTOP-205ENST00000403433 TSEN34Q9BSV6 310 aaKnown RBP18.19■□□□□ 0.5
CHTOP-205ENST00000403433 STARD7Q9NQZ5 370 aa18.19■□□□□ 0.5
CHTOP-205ENST00000403433 TMEM161AQ9NX61 479 aa18.19■□□□□ 0.5
CHTOP-205ENST00000403433 ARMCX1Q9P291 453 aa18.19■□□□□ 0.5
CHTOP-205ENST00000403433 MRPL42Q9Y6G3 142 aaKnown RBP18.19■□□□□ 0.5
CHTOP-205ENST00000403433 TTC3P53804 2025 aa18.19■□□□□ 0.5
CHTOP-205ENST00000403433 VWA8A3KMH1 1905 aa18.18■□□□□ 0.5
CHTOP-205ENST00000403433 A0A1W2PQ45 241 aaPredicted RBP18.18■□□□□ 0.5
CHTOP-205ENST00000403433 A0A1W2PQY0 241 aa18.18■□□□□ 0.5
CHTOP-205ENST00000403433 WASH4PA8MWX3 477 aa18.18■□□□□ 0.5
CHTOP-205ENST00000403433 GYG2O15488 501 aa18.18■□□□□ 0.5
CHTOP-205ENST00000403433 ITM2AO43736 263 aa18.18■□□□□ 0.5
CHTOP-205ENST00000403433 CPA3P15088 417 aa18.18■□□□□ 0.5
CHTOP-205ENST00000403433 MLLT6P55198 1093 aaPredicted RBP18.18■□□□□ 0.5
CHTOP-205ENST00000403433 POU6F1Q14863 301 aa18.18■□□□□ 0.5
CHTOP-205ENST00000403433 HSF5Q4G112 596 aaPredicted RBP18.18■□□□□ 0.5
CHTOP-205ENST00000403433 ARTNQ5T4W7 220 aa18.18■□□□□ 0.5
CHTOP-205ENST00000403433 PIK3R6Q5UE93 754 aa18.18■□□□□ 0.5
CHTOP-205ENST00000403433 SREK1Q8WXA9 508 aaKnown RBP18.18■□□□□ 0.5
CHTOP-205ENST00000403433 SLC39A13Q96H72 371 aa18.18■□□□□ 0.5
CHTOP-205ENST00000403433 MIPEPQ99797 713 aa18.18■□□□□ 0.5
CHTOP-205ENST00000403433 CAB39LQ9H9S4 337 aa18.18■□□□□ 0.5
CHTOP-205ENST00000403433 ENTPD7Q9NQZ7 604 aa18.18■□□□□ 0.5
CHTOP-205ENST00000403433 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.18■□□□□ 0.5
CHTOP-205ENST00000403433 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.18■□□□□ 0.5
CHTOP-205ENST00000403433 MYLKQ15746 1914 aa18.18■□□□□ 0.5
CHTOP-205ENST00000403433 GOLGA8TH3BQL2 631 aa18.17■□□□□ 0.5
CHTOP-205ENST00000403433 AOC2O75106 756 aa18.17■□□□□ 0.5
CHTOP-205ENST00000403433 RALBP11234 206 aa18.17■□□□□ 0.5
CHTOP-205ENST00000403433 GMPRP36959 345 aa18.17■□□□□ 0.5
CHTOP-205ENST00000403433 ZNF280DQ6N043 979 aa18.17■□□□□ 0.5
CHTOP-205ENST00000403433 LRRC8DQ7L1W4 858 aa18.17■□□□□ 0.5
CHTOP-205ENST00000403433 CCDC117Q8IWD4 279 aaPredicted RBP18.17■□□□□ 0.5
CHTOP-205ENST00000403433 CD99L2Q8TCZ2 262 aa18.17■□□□□ 0.5
CHTOP-205ENST00000403433 FAM96AQ9H5X1 160 aa18.17■□□□□ 0.5
CHTOP-205ENST00000403433 STN1Q9H668 368 aaKnown RBP18.17■□□□□ 0.5
CHTOP-205ENST00000403433 ZNF358Q9NW07 568 aa18.17■□□□□ 0.5
CHTOP-205ENST00000403433 RPL26L1Q9UNX3 145 aaKnown RBP18.17■□□□□ 0.5
CHTOP-205ENST00000403433 L3MBTL1Q9Y468 752 aa18.17■□□□□ 0.5
CHTOP-205ENST00000403433 OR6C75A6NL08 312 aa18.17■□□□□ 0.5
CHTOP-205ENST00000403433 PMPCBO75439 489 aa18.17■□□□□ 0.5
CHTOP-205ENST00000403433 COL6A1P12109 1028 aa18.17■□□□□ 0.5
CHTOP-205ENST00000403433 ABCE1P61221 599 aaKnown RBP18.17■□□□□ 0.5
CHTOP-205ENST00000403433 USP46P62068 366 aa18.17■□□□□ 0.5
CHTOP-205ENST00000403433 TBCCQ15814 346 aa18.17■□□□□ 0.5
CHTOP-205ENST00000403433 WASHC2DQ5SRD0 308 aa18.17■□□□□ 0.5
CHTOP-205ENST00000403433 FAM171A1Q5VUB5 890 aa18.17■□□□□ 0.5
CHTOP-205ENST00000403433 POTEHQ6S545 545 aa18.17■□□□□ 0.5
CHTOP-205ENST00000403433 PLD6Q8N2A8 252 aaKnown RBP18.17■□□□□ 0.5
CHTOP-205ENST00000403433 PTCD2Q8WV60 388 aaKnown RBP18.17■□□□□ 0.5
CHTOP-205ENST00000403433 ZNF778Q96MU6 729 aa18.17■□□□□ 0.5
CHTOP-205ENST00000403433 GPR22Q99680 433 aa18.17■□□□□ 0.5
CHTOP-205ENST00000403433 MCMBPQ9BTE3 642 aa18.17■□□□□ 0.5
CHTOP-205ENST00000403433 CADM1Q9BY67 442 aaKnown RBP18.17■□□□□ 0.5
CHTOP-205ENST00000403433 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.17■□□□□ 0.5
CHTOP-205ENST00000403433 RHOJQ9H4E5 214 aa18.17■□□□□ 0.5
CHTOP-205ENST00000403433 DONSONQ9NYP3 566 aa18.17■□□□□ 0.5
CHTOP-205ENST00000403433 NOP53Q9NZM5 478 aaKnown RBP18.17■□□□□ 0.5
CHTOP-205ENST00000403433 IPO11Q9UI26 975 aaKnown RBP18.17■□□□□ 0.5
CHTOP-205ENST00000403433 C2P06681 752 aa18.16■□□□□ 0.5
CHTOP-205ENST00000403433 IRF9Q00978 393 aa18.16■□□□□ 0.5
CHTOP-205ENST00000403433 EFEMP1Q12805 493 aa18.16■□□□□ 0.5
CHTOP-205ENST00000403433 ITGA9Q13797 1035 aa18.16■□□□□ 0.5
CHTOP-205ENST00000403433 DLG2Q15700 870 aa18.16■□□□□ 0.5
CHTOP-205ENST00000403433 UGP2Q16851 508 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms