RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 PIK3R1P27986 724 aa12.88□□□□□ -0.35
PPP4R1-202ENST00000400555 GSTT1P30711 240 aa12.88□□□□□ -0.35
PPP4R1-202ENST00000400555 CCNFP41002 786 aa12.88□□□□□ -0.35
PPP4R1-202ENST00000400555 CLCNKBP51801 687 aa12.88□□□□□ -0.35
PPP4R1-202ENST00000400555 PRAMEP78395 509 aa12.88□□□□□ -0.35
PPP4R1-202ENST00000400555 CYLC2Q14093 348 aaPredicted RBP12.88□□□□□ -0.35
PPP4R1-202ENST00000400555 SPANXN3Q5MJ09 141 aa12.88□□□□□ -0.35
PPP4R1-202ENST00000400555 ITPRIPL1Q6GPH6 555 aa12.88□□□□□ -0.35
PPP4R1-202ENST00000400555 LRRC52Q8N7C0 313 aa12.88□□□□□ -0.35
PPP4R1-202ENST00000400555 BHLHE22Q8NFJ8 381 aaPredicted RBP12.88□□□□□ -0.35
PPP4R1-202ENST00000400555 GPR152Q8TDT2 470 aa12.88□□□□□ -0.35
PPP4R1-202ENST00000400555 SORT1Q99523 831 aa12.88□□□□□ -0.35
PPP4R1-202ENST00000400555 RBBP8Q99708 897 aa12.88□□□□□ -0.35
PPP4R1-202ENST00000400555 NAT9Q9BTE0 207 aa12.88□□□□□ -0.35
PPP4R1-202ENST00000400555 RBM22Q9NW64 420 aaKnown RBP eCLIP12.88□□□□□ -0.35
PPP4R1-202ENST00000400555 ACOT9Q9Y305 439 aa12.88□□□□□ -0.35
PPP4R1-202ENST00000400555 V9GYQ6 96 aa12.88□□□□□ -0.35
PPP4R1-202ENST00000400555 FKBP6O75344 327 aa12.88□□□□□ -0.35
PPP4R1-202ENST00000400555 TFEBP19484 476 aa12.88□□□□□ -0.35
PPP4R1-202ENST00000400555 PITRM1Q5JRX3 1037 aa12.88□□□□□ -0.35
PPP4R1-202ENST00000400555 KYQ8NBH2 561 aa12.88□□□□□ -0.35
PPP4R1-202ENST00000400555 VRTNQ9H8Y1 702 aa12.88□□□□□ -0.35
PPP4R1-202ENST00000400555 CDYLQ9Y232 598 aa12.88□□□□□ -0.35
PPP4R1-202ENST00000400555 DNAJC25-GNG10A0A024R161 153 aa12.88□□□□□ -0.35
PPP4R1-202ENST00000400555 GOLGA8CPA6NN73 597 aa12.88□□□□□ -0.35
PPP4R1-202ENST00000400555 XPO1O14980 1071 aaKnown RBP12.88□□□□□ -0.35
PPP4R1-202ENST00000400555 TSPAN3O60637 253 aa12.88□□□□□ -0.35
PPP4R1-202ENST00000400555 JUNP05412 331 aaKnown RBP12.88□□□□□ -0.35
PPP4R1-202ENST00000400555 OR4Q2P0C623 313 aa12.88□□□□□ -0.35
PPP4R1-202ENST00000400555 GRIK1P39086 918 aa12.88□□□□□ -0.35
PPP4R1-202ENST00000400555 CCNG1P51959 295 aa12.88□□□□□ -0.35
PPP4R1-202ENST00000400555 RAP1GDS1P52306 607 aa12.88□□□□□ -0.35
PPP4R1-202ENST00000400555 SLC12A1Q13621 1099 aa12.88□□□□□ -0.35
PPP4R1-202ENST00000400555 PKDCCQ504Y2 493 aa12.88□□□□□ -0.35
PPP4R1-202ENST00000400555 DIS3LQ8TF46 1054 aaKnown RBP12.88□□□□□ -0.35
PPP4R1-202ENST00000400555 PPP2R3CQ969Q6 453 aa12.88□□□□□ -0.35
PPP4R1-202ENST00000400555 CENPKQ9BS16 269 aa12.88□□□□□ -0.35
PPP4R1-202ENST00000400555 HACD1B0YJ81 288 aa12.88□□□□□ -0.35
PPP4R1-202ENST00000400555 BTBD19C9JJ37 291 aa12.88□□□□□ -0.35
PPP4R1-202ENST00000400555 SEC24DO94855 1032 aaPredicted RBP12.88□□□□□ -0.35
PPP4R1-202ENST00000400555 OR6B1O95007 311 aa12.88□□□□□ -0.35
PPP4R1-202ENST00000400555 RALGDSQ12967 914 aa12.88□□□□□ -0.35
PPP4R1-202ENST00000400555 FAM187BQ17R55 369 aa12.88□□□□□ -0.35
PPP4R1-202ENST00000400555 GPR142Q7Z601 462 aa12.88□□□□□ -0.35
PPP4R1-202ENST00000400555 ZNF410Q86VK4 478 aa12.88□□□□□ -0.35
PPP4R1-202ENST00000400555 HDAC11Q96DB2 347 aa12.88□□□□□ -0.35
PPP4R1-202ENST00000400555 RTP4Q96DX8 246 aa12.88□□□□□ -0.35
PPP4R1-202ENST00000400555 ANKRD27Q96NW4 1050 aa12.88□□□□□ -0.35
PPP4R1-202ENST00000400555 SERPINI1Q99574 410 aa12.88□□□□□ -0.35
PPP4R1-202ENST00000400555 COLEC11Q9BWP8 271 aa12.88□□□□□ -0.35
PPP4R1-202ENST00000400555 VTA1Q9NP79 307 aa12.88□□□□□ -0.35
PPP4R1-202ENST00000400555 DDX18Q9NVP1 670 aaKnown RBP12.88□□□□□ -0.35
PPP4R1-202ENST00000400555 ZDHHC2Q9UIJ5 367 aa12.88□□□□□ -0.35
PPP4R1-202ENST00000400555 CRYL1Q9Y2S2 319 aa12.88□□□□□ -0.35
PPP4R1-202ENST00000400555 XRCC1P18887 633 aaPredicted RBP12.87□□□□□ -0.35
PPP4R1-202ENST00000400555 GJA5P36382 358 aa12.87□□□□□ -0.35
PPP4R1-202ENST00000400555 PSEN1P49768 467 aa12.87□□□□□ -0.35
PPP4R1-202ENST00000400555 CDH13P55290 713 aa12.87□□□□□ -0.35
PPP4R1-202ENST00000400555 PPIL2Q13356 520 aa12.87□□□□□ -0.35
PPP4R1-202ENST00000400555 MFSD10Q14728 455 aa12.87□□□□□ -0.35
PPP4R1-202ENST00000400555 KIF19Q2TAC6 998 aa12.87□□□□□ -0.35
PPP4R1-202ENST00000400555 BTBD8Q5XKL5 378 aa12.87□□□□□ -0.35
PPP4R1-202ENST00000400555 BNC2Q6ZN30 1099 aaPredicted RBP12.87□□□□□ -0.35
PPP4R1-202ENST00000400555 GK5Q6ZS86 529 aa12.87□□□□□ -0.35
PPP4R1-202ENST00000400555 TLK2Q86UE8 772 aa12.87□□□□□ -0.35
PPP4R1-202ENST00000400555 NT5DC4Q86YG4 428 aa12.87□□□□□ -0.35
PPP4R1-202ENST00000400555 MYLK4Q86YV6 388 aaPredicted RBP12.87□□□□□ -0.35
PPP4R1-202ENST00000400555 KLHL5Q96PQ7 755 aa12.87□□□□□ -0.35
PPP4R1-202ENST00000400555 RPL26L1Q9UNX3 145 aaKnown RBP12.87□□□□□ -0.35
PPP4R1-202ENST00000400555 VCLP18206 1134 aa12.87□□□□□ -0.35
PPP4R1-202ENST00000400555 PMLP29590 882 aa12.87□□□□□ -0.35
PPP4R1-202ENST00000400555 RPL14P50914 215 aaKnown RBP12.87□□□□□ -0.35
PPP4R1-202ENST00000400555 THOP1P52888 689 aa12.87□□□□□ -0.35
PPP4R1-202ENST00000400555 LIMK2P53671 638 aa12.87□□□□□ -0.35
PPP4R1-202ENST00000400555 CCNIQ14094 377 aa12.87□□□□□ -0.35
PPP4R1-202ENST00000400555 AGKQ53H12 422 aa12.87□□□□□ -0.35
PPP4R1-202ENST00000400555 ARHGAP17Q68EM7 881 aa12.87□□□□□ -0.35
PPP4R1-202ENST00000400555 MIB1Q86YT6 1006 aa12.87□□□□□ -0.35
PPP4R1-202ENST00000400555 FSTL5Q8N475 847 aaPredicted RBP12.87□□□□□ -0.35
PPP4R1-202ENST00000400555 EME1Q96AY2 570 aa12.87□□□□□ -0.35
PPP4R1-202ENST00000400555 PIF1Q9H611 641 aa12.87□□□□□ -0.35
PPP4R1-202ENST00000400555 RGS17Q9UGC6 210 aaPredicted RBP12.87□□□□□ -0.35
PPP4R1-202ENST00000400555 AURKCQ9UQB9 309 aa12.87□□□□□ -0.35
PPP4R1-202ENST00000400555 TLL2Q9Y6L7 1015 aa12.87□□□□□ -0.35
PPP4R1-202ENST00000400555 C9IYK1 514 aa12.87□□□□□ -0.35
PPP4R1-202ENST00000400555 TIMM44O43615 452 aa12.87□□□□□ -0.35
PPP4R1-202ENST00000400555 SUPT7LO94864 414 aa12.87□□□□□ -0.35
PPP4R1-202ENST00000400555 AP2A1O95782 977 aa12.87□□□□□ -0.35
PPP4R1-202ENST00000400555 THRAP10827 490 aa12.87□□□□□ -0.35
PPP4R1-202ENST00000400555 STMN1P16949 149 aa12.87□□□□□ -0.35
PPP4R1-202ENST00000400555 EPHX2P34913 555 aa12.87□□□□□ -0.35
PPP4R1-202ENST00000400555 ALDH1A3P47895 512 aa12.87□□□□□ -0.35
PPP4R1-202ENST00000400555 GJA9P57773 515 aa12.87□□□□□ -0.35
PPP4R1-202ENST00000400555 PLIN5Q00G26 463 aa12.87□□□□□ -0.35
PPP4R1-202ENST00000400555 FOLH1Q04609 750 aa12.87□□□□□ -0.35
PPP4R1-202ENST00000400555 PDAP1Q13442 181 aaKnown RBP12.87□□□□□ -0.35
PPP4R1-202ENST00000400555 RPS6KA2Q15349 733 aa12.87□□□□□ -0.35
PPP4R1-202ENST00000400555 TBCCQ15814 346 aa12.87□□□□□ -0.35
PPP4R1-202ENST00000400555 CCDC153Q494R4 210 aa12.87□□□□□ -0.35
PPP4R1-202ENST00000400555 LRRC8EQ6NSJ5 796 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms