RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 SPPL2AQ8TCT8 520 aa18.44■□□□□ 0.54
COL18A1-204ENST00000400337 ZBTB14O43829 449 aa18.44■□□□□ 0.54
COL18A1-204ENST00000400337 PIWIL2Q8TC59 973 aaKnown RBP18.44■□□□□ 0.54
COL18A1-204ENST00000400337 GDPD5Q8WTR4 605 aa18.44■□□□□ 0.54
COL18A1-204ENST00000400337 BSNDQ8WZ55 320 aa18.44■□□□□ 0.54
COL18A1-204ENST00000400337 ABHD2P08910 425 aa18.44■□□□□ 0.54
COL18A1-204ENST00000400337 RPS7P62081 194 aaKnown RBP18.44■□□□□ 0.54
COL18A1-204ENST00000400337 PHKG1Q16816 387 aa18.44■□□□□ 0.54
COL18A1-204ENST00000400337 FNDC3BQ53EP0 1204 aaKnown RBP18.44■□□□□ 0.54
COL18A1-204ENST00000400337 USP45Q70EL2 814 aa18.44■□□□□ 0.54
COL18A1-204ENST00000400337 CENPTQ96BT3 561 aa18.44■□□□□ 0.54
COL18A1-204ENST00000400337 ZNF558Q96NG5 402 aa18.44■□□□□ 0.54
COL18A1-204ENST00000400337 ASB2Q96Q27 587 aa18.44■□□□□ 0.54
COL18A1-204ENST00000400337 CCDC3Q9BQI4 270 aa18.44■□□□□ 0.54
COL18A1-204ENST00000400337 ADCY6O43306 1168 aa18.44■□□□□ 0.54
COL18A1-204ENST00000400337 SNX3O60493 162 aa18.44■□□□□ 0.54
COL18A1-204ENST00000400337 ERBB2P04626 1255 aa18.44■□□□□ 0.54
COL18A1-204ENST00000400337 SP3Q02447 781 aa18.44■□□□□ 0.54
COL18A1-204ENST00000400337 ADRM1Q16186 407 aa18.44■□□□□ 0.54
COL18A1-204ENST00000400337 SLC25A23Q9BV35 468 aa18.44■□□□□ 0.54
COL18A1-204ENST00000400337 ACTL7BQ9Y614 415 aa18.44■□□□□ 0.54
COL18A1-204ENST00000400337 ZNF862O60290 1169 aa18.44■□□□□ 0.54
COL18A1-204ENST00000400337 HDCP19113 662 aa18.44■□□□□ 0.54
COL18A1-204ENST00000400337 DUSP16Q9BY84 665 aa18.44■□□□□ 0.54
COL18A1-204ENST00000400337 FAM105AQ9NUU6 356 aa18.44■□□□□ 0.54
COL18A1-204ENST00000400337 MORF4L1Q9UBU8 362 aa18.44■□□□□ 0.54
COL18A1-204ENST00000400337 STARD13Q9Y3M8 1113 aa18.44■□□□□ 0.54
COL18A1-204ENST00000400337 PTCH2Q9Y6C5 1203 aa18.44■□□□□ 0.54
COL18A1-204ENST00000400337 SLIT3O75094 1523 aa18.43■□□□□ 0.54
COL18A1-204ENST00000400337 SNTNA6NMZ2 147 aa18.43■□□□□ 0.54
COL18A1-204ENST00000400337 DDR2Q16832 855 aa18.43■□□□□ 0.54
COL18A1-204ENST00000400337 FAM35AQ86V20 835 aa18.43■□□□□ 0.54
COL18A1-204ENST00000400337 ZSCAN18Q8TBC5 510 aaPredicted RBP18.43■□□□□ 0.54
COL18A1-204ENST00000400337 TRPC4APQ8TEL6 797 aa18.43■□□□□ 0.54
COL18A1-204ENST00000400337 SEMA3CQ99985 751 aa18.43■□□□□ 0.54
COL18A1-204ENST00000400337 MLPHQ9BV36 600 aaPredicted RBP18.43■□□□□ 0.54
COL18A1-204ENST00000400337 TM6SF2Q9BZW4 377 aa18.43■□□□□ 0.54
COL18A1-204ENST00000400337 E7ENQ6 273 aa18.43■□□□□ 0.54
COL18A1-204ENST00000400337 RGS5O15539 181 aa18.43■□□□□ 0.54
COL18A1-204ENST00000400337 VPS4BO75351 444 aa18.43■□□□□ 0.54
COL18A1-204ENST00000400337 PRKAR2AP13861 404 aaKnown RBP18.43■□□□□ 0.54
COL18A1-204ENST00000400337 SETMARQ53H47 684 aaPredicted RBP18.43■□□□□ 0.54
COL18A1-204ENST00000400337 GRIN3AQ8TCU5 1115 aa18.43■□□□□ 0.54
COL18A1-204ENST00000400337 NDUFA13Q9P0J0 144 aa18.43■□□□□ 0.54
COL18A1-204ENST00000400337 GIT1Q9Y2X7 761 aa18.43■□□□□ 0.54
COL18A1-204ENST00000400337 TMEM191CA6NGB0 347 aa18.43■□□□□ 0.54
COL18A1-204ENST00000400337 AVILO75366 819 aa18.43■□□□□ 0.54
COL18A1-204ENST00000400337 PTPN3P26045 913 aa18.43■□□□□ 0.54
COL18A1-204ENST00000400337 BRCC3P46736 316 aa18.43■□□□□ 0.54
COL18A1-204ENST00000400337 PRKCQQ04759 706 aa18.43■□□□□ 0.54
COL18A1-204ENST00000400337 C9orf57Q5W0N0 161 aa18.43■□□□□ 0.54
COL18A1-204ENST00000400337 STAG3L4Q8TBR4 150 aa18.43■□□□□ 0.54
COL18A1-204ENST00000400337 EBNA1BP2Q99848 306 aaKnown RBP18.43■□□□□ 0.54
COL18A1-204ENST00000400337 FAM126AQ9BYI3 521 aaPredicted RBP18.43■□□□□ 0.54
COL18A1-204ENST00000400337 ROGDIQ9GZN7 287 aa18.43■□□□□ 0.54
COL18A1-204ENST00000400337 IL1RAPL1Q9NZN1 696 aa18.43■□□□□ 0.54
COL18A1-204ENST00000400337 LIMD1Q9UGP4 676 aa18.43■□□□□ 0.54
COL18A1-204ENST00000400337 ATP5BP06576 529 aaKnown RBP18.43■□□□□ 0.54
COL18A1-204ENST00000400337 ABL2P42684 1182 aa18.43■□□□□ 0.54
COL18A1-204ENST00000400337 PSEN1P49768 467 aa18.43■□□□□ 0.54
COL18A1-204ENST00000400337 FRG1Q14331 258 aaKnown RBP18.43■□□□□ 0.54
COL18A1-204ENST00000400337 DUSP28Q4G0W2 176 aa18.43■□□□□ 0.54
COL18A1-204ENST00000400337 PTPN20Q4JDL3 420 aa18.43■□□□□ 0.54
COL18A1-204ENST00000400337 RGMBQ6NW40 437 aa18.43■□□□□ 0.54
COL18A1-204ENST00000400337 OR6Y1Q8NGX8 325 aa18.43■□□□□ 0.54
COL18A1-204ENST00000400337 RNF145Q96MT1 663 aa18.43■□□□□ 0.54
COL18A1-204ENST00000400337 NDNQ99608 321 aa18.43■□□□□ 0.54
COL18A1-204ENST00000400337 ASB8Q9H765 288 aa18.43■□□□□ 0.54
COL18A1-204ENST00000400337 KRCC1Q9NPI7 259 aaPredicted RBP18.43■□□□□ 0.54
COL18A1-204ENST00000400337 NUDT17P0C025 328 aa18.42■□□□□ 0.54
COL18A1-204ENST00000400337 DGKAP23743 735 aa18.42■□□□□ 0.54
COL18A1-204ENST00000400337 HIRAP54198 1017 aaPredicted RBP18.42■□□□□ 0.54
COL18A1-204ENST00000400337 PKNOX1P55347 436 aa18.42■□□□□ 0.54
COL18A1-204ENST00000400337 MAXP61244 160 aa18.42■□□□□ 0.54
COL18A1-204ENST00000400337 IL5RAQ01344 420 aa18.42■□□□□ 0.54
COL18A1-204ENST00000400337 GLMNQ92990 594 aa18.42■□□□□ 0.54
COL18A1-204ENST00000400337 MTFMTQ96DP5 389 aaKnown RBP18.42■□□□□ 0.54
COL18A1-204ENST00000400337 B3GNT5Q9BYG0 378 aa18.42■□□□□ 0.54
COL18A1-204ENST00000400337 PPP2R1BP30154 601 aa18.42■□□□□ 0.54
COL18A1-204ENST00000400337 FBXL19Q6PCT2 694 aa18.42■□□□□ 0.54
COL18A1-204ENST00000400337 DSG4Q86SJ6 1040 aa18.42■□□□□ 0.54
COL18A1-204ENST00000400337 TOP6BLQ8N6T0 577 aa18.42■□□□□ 0.54
COL18A1-204ENST00000400337 BDH2Q9BUT1 245 aa18.42■□□□□ 0.54
COL18A1-204ENST00000400337 GOLGA2P5Q9HBQ8 144 aa18.42■□□□□ 0.54
COL18A1-204ENST00000400337 RGS14O43566 566 aa18.42■□□□□ 0.54
COL18A1-204ENST00000400337 CCDC159P0C7I6 412 aa18.42■□□□□ 0.54
COL18A1-204ENST00000400337 HPGDP15428 266 aa18.42■□□□□ 0.54
COL18A1-204ENST00000400337 DCLRE1AQ6PJP8 1040 aa18.42■□□□□ 0.54
COL18A1-204ENST00000400337 OSCP1Q8WVF1 389 aa18.42■□□□□ 0.54
COL18A1-204ENST00000400337 IGFLR1Q9H665 355 aa18.42■□□□□ 0.54
COL18A1-204ENST00000400337 TRAPPC5Q8IUR0 188 aa18.42■□□□□ 0.54
COL18A1-204ENST00000400337 APLFQ8IW19 511 aaPredicted RBP18.42■□□□□ 0.54
COL18A1-204ENST00000400337 BPIFA1Q9NP55 256 aa18.42■□□□□ 0.54
COL18A1-204ENST00000400337 CNGB3Q9NQW8 809 aa18.42■□□□□ 0.54
COL18A1-204ENST00000400337 B4GALT4O60513 344 aa18.41■□□□□ 0.54
COL18A1-204ENST00000400337 PIRTP0C851 137 aa18.41■□□□□ 0.54
COL18A1-204ENST00000400337 HSPA14Q0VDF9 509 aa18.41■□□□□ 0.54
COL18A1-204ENST00000400337 STXBP5Q5T5C0 1151 aa18.41■□□□□ 0.54
COL18A1-204ENST00000400337 PTGR2Q8N8N7 351 aaPredicted RBP18.41■□□□□ 0.54
COL18A1-204ENST00000400337 FTHL17Q9BXU8 183 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms